EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000016548 (Gene tree)
Gene ID: 100588909
Gene Symbol: RAD54L
Alias: RAD54A|hHR54|hRAD54
Full Name: RAD54 like
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 33367 bases
Position: chr12:15479511-15512877
Accession: 100588909
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000037459	ResIII	PF04851.15	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000021115	RAD54L-201	2737	-	ENSNLEP00000020109	489 (aa)	-	G1S3M1
ENSNLET00000032431	RAD54L-203	1563	-	ENSNLEP00000024059	520 (aa)	-	M3ZBH2
ENSNLET00000056761	RAD54L-202	2241	XM_003259029	ENSNLEP00000037459	746 (aa)	XP_003259077	A0A2I3H1I4

Gene Model

Click here to download ENSNLEG00000016548's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000016548's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000016548	RAD54L	67	38.916	ENSNLEG00000001144	ATRX	50	38.916
ENSNLEG00000016548	RAD54L	71	30.339	ENSNLEG00000016784	ERCC6L2	79	30.339
ENSNLEG00000016548	RAD54L	58	35.981	ENSNLEG00000012987	HELLS	64	35.981
ENSNLEG00000016548	RAD54L	77	47.279	ENSNLEG00000003062	-	79	47.279

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000016548	RAD54L	100	98.527	ENSG00000085999	RAD54L	100	99.010	Homo_sapiens
ENSNLEG00000016548	RAD54L	99	77.254	ENSAPOG00000011643	rad54l	99	77.254	Acanthochromis_polyacanthus
ENSNLEG00000016548	RAD54L	99	94.765	ENSAMEG00000013902	RAD54L	99	94.765	Ailuropoda_melanoleuca
ENSNLEG00000016548	RAD54L	99	77.852	ENSACIG00000001939	rad54l	99	77.852	Amphilophus_citrinellus
ENSNLEG00000016548	RAD54L	99	80.485	ENSAOCG00000017576	rad54l	99	80.485	Amphiprion_ocellaris
ENSNLEG00000016548	RAD54L	95	80.899	ENSAPEG00000020658	rad54l	98	80.899	Amphiprion_percula
ENSNLEG00000016548	RAD54L	94	81.960	ENSATEG00000006767	rad54l	99	81.960	Anabas_testudineus
ENSNLEG00000016548	RAD54L	94	86.182	ENSAPLG00000006389	RAD54L	99	86.182	Anas_platyrhynchos
ENSNLEG00000016548	RAD54L	99	84.203	ENSACAG00000002312	RAD54L	99	84.203	Anolis_carolinensis
ENSNLEG00000016548	RAD54L	100	97.189	ENSANAG00000035439	RAD54L	100	97.189	Aotus_nancymaae
ENSNLEG00000016548	RAD54L	99	76.944	ENSACLG00000018711	rad54l	99	76.944	Astatotilapia_calliptera
ENSNLEG00000016548	RAD54L	99	79.491	ENSAMXG00000012777	rad54l	99	79.491	Astyanax_mexicanus
ENSNLEG00000016548	RAD54L	99	94.378	ENSBTAG00000019901	RAD54L	99	94.378	Bos_taurus
ENSNLEG00000016548	RAD54L	90	58.382	WBGene00004298	rad-54	82	58.382	Caenorhabditis_elegans
ENSNLEG00000016548	RAD54L	99	94.385	ENSCJAG00000021080	RAD54L	94	96.986	Callithrix_jacchus
ENSNLEG00000016548	RAD54L	99	94.370	ENSCAFG00000004272	RAD54L	99	94.370	Canis_familiaris
ENSNLEG00000016548	RAD54L	99	94.362	ENSCAFG00020015066	RAD54L	99	94.362	Canis_lupus_dingo
ENSNLEG00000016548	RAD54L	99	93.700	ENSCHIG00000020118	RAD54L	99	93.700	Capra_hircus
ENSNLEG00000016548	RAD54L	100	93.850	ENSTSYG00000002032	RAD54L	100	93.850	Carlito_syrichta
ENSNLEG00000016548	RAD54L	99	94.370	ENSCPOG00000006768	RAD54L	99	94.370	Cavia_porcellus
ENSNLEG00000016548	RAD54L	100	97.590	ENSCCAG00000025783	RAD54L	100	97.590	Cebus_capucinus
ENSNLEG00000016548	RAD54L	100	97.858	ENSCATG00000030589	RAD54L	100	97.858	Cercocebus_atys
ENSNLEG00000016548	RAD54L	99	95.040	ENSCLAG00000004645	RAD54L	99	95.040	Chinchilla_lanigera
ENSNLEG00000016548	RAD54L	100	97.992	ENSCSAG00000001229	RAD54L	100	97.992	Chlorocebus_sabaeus
ENSNLEG00000016548	RAD54L	99	85.810	ENSCPBG00000005675	RAD54L	99	85.810	Chrysemys_picta_bellii
ENSNLEG00000016548	RAD54L	99	62.113	ENSCING00000024456	-	99	62.033	Ciona_intestinalis
ENSNLEG00000016548	RAD54L	99	62.500	ENSCSAVG00000010859	-	99	62.630	Ciona_savignyi
ENSNLEG00000016548	RAD54L	100	97.724	ENSCANG00000034891	RAD54L	100	97.724	Colobus_angolensis_palliatus
ENSNLEG00000016548	RAD54L	99	93.298	ENSCGRG00001014807	Rad54l	99	93.298	Cricetulus_griseus_chok1gshd
ENSNLEG00000016548	RAD54L	99	93.298	ENSCGRG00000016038	Rad54l	99	93.298	Cricetulus_griseus_crigri
ENSNLEG00000016548	RAD54L	99	77.852	ENSCSEG00000001983	rad54l	99	77.852	Cynoglossus_semilaevis
ENSNLEG00000016548	RAD54L	86	82.213	ENSCVAG00000019561	rad54l	99	82.213	Cyprinodon_variegatus
ENSNLEG00000016548	RAD54L	99	79.223	ENSDARG00000018623	rad54l	99	79.223	Danio_rerio
ENSNLEG00000016548	RAD54L	99	92.761	ENSDNOG00000003395	RAD54L	99	92.761	Dasypus_novemcinctus
ENSNLEG00000016548	RAD54L	100	82.982	ENSDORG00000002632	Rad54l	100	83.113	Dipodomys_ordii
ENSNLEG00000016548	RAD54L	99	54.654	FBgn0002989	okr	95	54.654	Drosophila_melanogaster
ENSNLEG00000016548	RAD54L	78	93.450	ENSETEG00000000550	RAD54L	78	93.450	Echinops_telfairi
ENSNLEG00000016548	RAD54L	99	94.631	ENSEASG00005004511	RAD54L	99	94.631	Equus_asinus_asinus
ENSNLEG00000016548	RAD54L	99	95.040	ENSECAG00000008760	RAD54L	99	95.040	Equus_caballus
ENSNLEG00000016548	RAD54L	99	87.668	ENSEEUG00000008113	RAD54L	99	87.668	Erinaceus_europaeus
ENSNLEG00000016548	RAD54L	99	80.774	ENSELUG00000002295	rad54l	99	80.774	Esox_lucius
ENSNLEG00000016548	RAD54L	99	93.566	ENSFCAG00000003444	RAD54L	99	93.566	Felis_catus
ENSNLEG00000016548	RAD54L	99	84.626	ENSFALG00000009480	RAD54L	99	84.626	Ficedula_albicollis
ENSNLEG00000016548	RAD54L	100	94.378	ENSFDAG00000007806	RAD54L	100	94.378	Fukomys_damarensis
ENSNLEG00000016548	RAD54L	61	77.582	ENSFHEG00000009824	rad54l	78	77.582	Fundulus_heteroclitus
ENSNLEG00000016548	RAD54L	99	77.718	ENSGMOG00000014568	rad54l	99	77.718	Gadus_morhua
ENSNLEG00000016548	RAD54L	99	84.316	ENSGALG00000010356	RAD54L	92	84.316	Gallus_gallus
ENSNLEG00000016548	RAD54L	91	78.466	ENSGAFG00000011110	rad54l	100	78.466	Gambusia_affinis
ENSNLEG00000016548	RAD54L	99	79.384	ENSGACG00000003111	rad54l	97	79.384	Gasterosteus_aculeatus
ENSNLEG00000016548	RAD54L	99	85.657	ENSGAGG00000014089	RAD54L	96	85.657	Gopherus_agassizii
ENSNLEG00000016548	RAD54L	100	98.661	ENSGGOG00000010602	RAD54L	100	98.661	Gorilla_gorilla
ENSNLEG00000016548	RAD54L	99	77.212	ENSHBUG00000007793	rad54l	99	77.212	Haplochromis_burtoni
ENSNLEG00000016548	RAD54L	100	94.779	ENSHGLG00000000753	RAD54L	100	94.779	Heterocephalus_glaber_female
ENSNLEG00000016548	RAD54L	100	94.645	ENSHGLG00100016987	RAD54L	100	94.645	Heterocephalus_glaber_male
ENSNLEG00000016548	RAD54L	99	77.600	ENSIPUG00000015999	rad54l	99	80.830	Ictalurus_punctatus
ENSNLEG00000016548	RAD54L	99	94.504	ENSSTOG00000029125	RAD54L	99	94.504	Ictidomys_tridecemlineatus
ENSNLEG00000016548	RAD54L	99	80.268	ENSJJAG00000000235	-	99	80.134	Jaculus_jaculus
ENSNLEG00000016548	RAD54L	99	78.226	ENSKMAG00000009944	rad54l	99	78.226	Kryptolebias_marmoratus
ENSNLEG00000016548	RAD54L	99	80.511	ENSLBEG00000014617	rad54l	99	82.336	Labrus_bergylta
ENSNLEG00000016548	RAD54L	99	80.965	ENSLOCG00000004144	rad54l	100	82.493	Lepisosteus_oculatus
ENSNLEG00000016548	RAD54L	99	94.631	ENSLAFG00000007583	RAD54L	99	94.631	Loxodonta_africana
ENSNLEG00000016548	RAD54L	99	97.855	ENSMFAG00000031241	RAD54L	99	97.855	Macaca_fascicularis
ENSNLEG00000016548	RAD54L	99	97.855	ENSMMUG00000011568	RAD54L	99	97.855	Macaca_mulatta
ENSNLEG00000016548	RAD54L	99	97.855	ENSMNEG00000038562	RAD54L	99	97.855	Macaca_nemestrina
ENSNLEG00000016548	RAD54L	100	97.992	ENSMLEG00000038145	RAD54L	100	97.992	Mandrillus_leucophaeus
ENSNLEG00000016548	RAD54L	99	78.983	ENSMAMG00000022180	rad54l	100	82.111	Mastacembelus_armatus
ENSNLEG00000016548	RAD54L	99	76.810	ENSMZEG00005018081	rad54l	99	76.810	Maylandia_zebra
ENSNLEG00000016548	RAD54L	99	84.027	ENSMGAG00000010634	RAD54L	99	84.027	Meleagris_gallopavo
ENSNLEG00000016548	RAD54L	99	93.029	ENSMAUG00000020076	Rad54l	99	93.029	Mesocricetus_auratus
ENSNLEG00000016548	RAD54L	99	95.845	ENSMICG00000003266	RAD54L	99	95.845	Microcebus_murinus
ENSNLEG00000016548	RAD54L	99	93.566	ENSMOCG00000001778	Rad54l	99	93.566	Microtus_ochrogaster
ENSNLEG00000016548	RAD54L	99	76.810	ENSMALG00000021148	rad54l	99	76.810	Monopterus_albus
ENSNLEG00000016548	RAD54L	99	89.570	MGP_CAROLIEiJ_G0026325	Rad54l	99	89.570	Mus_caroli
ENSNLEG00000016548	RAD54L	99	94.504	ENSMUSG00000028702	Rad54l	99	94.504	Mus_musculus
ENSNLEG00000016548	RAD54L	99	94.236	MGP_PahariEiJ_G0028657	Rad54l	99	94.236	Mus_pahari
ENSNLEG00000016548	RAD54L	99	94.370	MGP_SPRETEiJ_G0027297	Rad54l	99	94.370	Mus_spretus
ENSNLEG00000016548	RAD54L	99	94.102	ENSMPUG00000012883	RAD54L	99	94.102	Mustela_putorius_furo
ENSNLEG00000016548	RAD54L	99	95.845	ENSMLUG00000003763	RAD54L	99	95.845	Myotis_lucifugus
ENSNLEG00000016548	RAD54L	99	92.225	ENSNGAG00000024213	Rad54l	99	92.225	Nannospalax_galili
ENSNLEG00000016548	RAD54L	90	84.763	ENSMEUG00000006793	RAD54L	99	84.763	Notamacropus_eugenii
ENSNLEG00000016548	RAD54L	90	92.683	ENSOPRG00000016016	RAD54L	90	92.683	Ochotona_princeps
ENSNLEG00000016548	RAD54L	100	95.047	ENSODEG00000008519	RAD54L	99	95.047	Octodon_degus
ENSNLEG00000016548	RAD54L	99	77.212	ENSONIG00000007659	rad54l	99	77.212	Oreochromis_niloticus
ENSNLEG00000016548	RAD54L	99	93.700	ENSOCUG00000005229	RAD54L	99	93.700	Oryctolagus_cuniculus
ENSNLEG00000016548	RAD54L	99	78.121	ENSORLG00000002958	rad54l	99	78.523	Oryzias_latipes
ENSNLEG00000016548	RAD54L	99	78.658	ENSORLG00020006554	rad54l	99	81.672	Oryzias_latipes_hni
ENSNLEG00000016548	RAD54L	99	78.389	ENSORLG00015002907	rad54l	99	78.658	Oryzias_latipes_hsok
ENSNLEG00000016548	RAD54L	99	78.658	ENSOMEG00000007770	rad54l	99	78.658	Oryzias_melastigma
ENSNLEG00000016548	RAD54L	99	93.717	ENSOARG00000002264	RAD54L	99	93.717	Ovis_aries
ENSNLEG00000016548	RAD54L	100	98.527	ENSPPAG00000031222	RAD54L	100	98.527	Pan_paniscus
ENSNLEG00000016548	RAD54L	99	93.566	ENSPPRG00000010317	RAD54L	99	93.566	Panthera_pardus
ENSNLEG00000016548	RAD54L	99	93.566	ENSPTIG00000012200	RAD54L	99	93.566	Panthera_tigris_altaica
ENSNLEG00000016548	RAD54L	100	98.661	ENSPTRG00000000689	RAD54L	100	98.661	Pan_troglodytes
ENSNLEG00000016548	RAD54L	100	97.992	ENSPANG00000016295	RAD54L	100	97.992	Papio_anubis
ENSNLEG00000016548	RAD54L	99	75.806	ENSPKIG00000016172	rad54l	99	75.806	Paramormyrops_kingsleyae
ENSNLEG00000016548	RAD54L	99	85.366	ENSPSIG00000003258	RAD54L	99	85.366	Pelodiscus_sinensis
ENSNLEG00000016548	RAD54L	99	75.469	ENSPMGG00000016335	rad54l	99	75.469	Periophthalmus_magnuspinnatus
ENSNLEG00000016548	RAD54L	99	93.700	ENSPEMG00000011422	Rad54l	99	93.700	Peromyscus_maniculatus_bairdii
ENSNLEG00000016548	RAD54L	99	70.872	ENSPMAG00000007719	rad54l	99	70.872	Petromyzon_marinus
ENSNLEG00000016548	RAD54L	99	87.399	ENSPCIG00000029032	RAD54L	99	87.399	Phascolarctos_cinereus
ENSNLEG00000016548	RAD54L	85	80.975	ENSPFOG00000013732	rad54l	100	80.975	Poecilia_formosa
ENSNLEG00000016548	RAD54L	81	79.708	ENSPLAG00000023416	rad54l	99	79.708	Poecilia_latipinna
ENSNLEG00000016548	RAD54L	91	78.909	ENSPMEG00000008299	rad54l	100	78.909	Poecilia_mexicana
ENSNLEG00000016548	RAD54L	99	77.406	ENSPREG00000019955	rad54l	99	77.406	Poecilia_reticulata
ENSNLEG00000016548	RAD54L	94	97.340	ENSPPYG00000001398	RAD54L	99	97.340	Pongo_abelii
ENSNLEG00000016548	RAD54L	80	90.777	ENSPCAG00000005323	RAD54L	80	90.777	Procavia_capensis
ENSNLEG00000016548	RAD54L	99	95.845	ENSPCOG00000015423	RAD54L	99	95.845	Propithecus_coquereli
ENSNLEG00000016548	RAD54L	99	73.740	ENSPNYG00000002942	rad54l	99	73.740	Pundamilia_nyererei
ENSNLEG00000016548	RAD54L	99	79.357	ENSPNAG00000012483	rad54l	99	79.357	Pygocentrus_nattereri
ENSNLEG00000016548	RAD54L	99	93.700	ENSRNOG00000013148	Rad54l	99	93.700	Rattus_norvegicus
ENSNLEG00000016548	RAD54L	100	97.724	ENSRBIG00000043495	RAD54L	100	97.724	Rhinopithecus_bieti
ENSNLEG00000016548	RAD54L	100	97.858	ENSRROG00000020844	RAD54L	100	97.858	Rhinopithecus_roxellana
ENSNLEG00000016548	RAD54L	80	48.074	YGL163C	RAD54	71	48.382	Saccharomyces_cerevisiae
ENSNLEG00000016548	RAD54L	100	97.590	ENSSBOG00000024672	RAD54L	100	97.590	Saimiri_boliviensis_boliviensis
ENSNLEG00000016548	RAD54L	99	86.898	ENSSHAG00000000110	RAD54L	99	86.898	Sarcophilus_harrisii
ENSNLEG00000016548	RAD54L	99	80.295	ENSSDUG00000019147	rad54l	99	80.295	Seriola_dumerili
ENSNLEG00000016548	RAD54L	99	80.161	ENSSLDG00000012330	rad54l	99	80.161	Seriola_lalandi_dorsalis
ENSNLEG00000016548	RAD54L	83	88.604	ENSSARG00000006689	RAD54L	100	88.604	Sorex_araneus
ENSNLEG00000016548	RAD54L	99	79.732	ENSSPAG00000011016	rad54l	99	79.732	Stegastes_partitus
ENSNLEG00000016548	RAD54L	100	94.645	ENSSSCG00000003905	RAD54L	100	94.645	Sus_scrofa
ENSNLEG00000016548	RAD54L	99	83.802	ENSTGUG00000008233	RAD54L	99	83.936	Taeniopygia_guttata
ENSNLEG00000016548	RAD54L	99	76.408	ENSTRUG00000008410	rad54l	99	76.408	Takifugu_rubripes
ENSNLEG00000016548	RAD54L	99	75.973	ENSTNIG00000004716	rad54l	99	76.408	Tetraodon_nigroviridis
ENSNLEG00000016548	RAD54L	99	85.791	ENSTTRG00000006315	RAD54L	99	85.791	Tursiops_truncatus
ENSNLEG00000016548	RAD54L	99	94.197	ENSUAMG00000011824	RAD54L	99	94.197	Ursus_americanus
ENSNLEG00000016548	RAD54L	99	93.117	ENSUMAG00000023603	RAD54L	99	93.117	Ursus_maritimus
ENSNLEG00000016548	RAD54L	99	94.370	ENSVVUG00000007201	RAD54L	99	94.370	Vulpes_vulpes
ENSNLEG00000016548	RAD54L	96	77.917	ENSXETG00000004369	rad54l	99	77.917	Xenopus_tropicalis
ENSNLEG00000016548	RAD54L	55	74.515	ENSXCOG00000016028	rad54l	81	78.591	Xiphophorus_couchianus