EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000016578 (Gene tree)
Gene ID: 100590425
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 9197 bases
Position: chr18:59943405-59952601
Accession: 100590425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000020113	Gar1	PF04410.14	1.3e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000021119	GAR1-201	1262	XM_003269356	ENSNLEP00000020113	216 (aa)	XP_003269404	G1S3M5

Gene Model

Click here to download ENSNLEG00000016578's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000016578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000016578	GAR1	51	83.784	ENSNLEG00000034282	-	56	83.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000016578	GAR1	100	98.157	ENSG00000109534	GAR1	100	98.157	Homo_sapiens
ENSNLEG00000016578	GAR1	50	94.393	ENSAPOG00000019754	gar1	52	92.727	Acanthochromis_polyacanthus
ENSNLEG00000016578	GAR1	50	98.165	ENSAMEG00000004605	GAR1	54	98.182	Ailuropoda_melanoleuca
ENSNLEG00000016578	GAR1	50	94.393	ENSAOCG00000020947	gar1	51	92.727	Amphiprion_ocellaris
ENSNLEG00000016578	GAR1	50	94.393	ENSAPEG00000001676	gar1	51	92.727	Amphiprion_percula
ENSNLEG00000016578	GAR1	50	94.393	ENSATEG00000003733	gar1	51	92.727	Anabas_testudineus
ENSNLEG00000016578	GAR1	100	97.248	ENSANAG00000021608	GAR1	100	97.248	Aotus_nancymaae
ENSNLEG00000016578	GAR1	50	99.083	ENSBTAG00000000748	GAR1	52	99.091	Bos_taurus
ENSNLEG00000016578	GAR1	100	96.789	ENSCJAG00000004041	GAR1	100	96.789	Callithrix_jacchus
ENSNLEG00000016578	GAR1	67	80.556	ENSCHIG00000011049	-	55	86.364	Capra_hircus
ENSNLEG00000016578	GAR1	51	99.091	ENSCHIG00000016026	-	53	99.091	Capra_hircus
ENSNLEG00000016578	GAR1	50	100.000	ENSTSYG00000013668	-	52	100.000	Carlito_syrichta
ENSNLEG00000016578	GAR1	50	91.743	ENSTSYG00000026632	-	56	91.818	Carlito_syrichta
ENSNLEG00000016578	GAR1	51	99.091	ENSCPOG00000004216	GAR1	51	99.091	Cavia_porcellus
ENSNLEG00000016578	GAR1	100	97.248	ENSCCAG00000029372	GAR1	100	97.248	Cebus_capucinus
ENSNLEG00000016578	GAR1	100	97.696	ENSCATG00000021854	GAR1	100	97.696	Cercocebus_atys
ENSNLEG00000016578	GAR1	51	97.273	ENSCLAG00000005335	GAR1	99	94.937	Chinchilla_lanigera
ENSNLEG00000016578	GAR1	90	96.923	ENSCSAG00000003922	GAR1	98	96.923	Chlorocebus_sabaeus
ENSNLEG00000016578	GAR1	54	99.138	ENSCHOG00000007484	-	51	99.138	Choloepus_hoffmanni
ENSNLEG00000016578	GAR1	100	96.774	ENSCANG00000039262	GAR1	100	96.774	Colobus_angolensis_palliatus
ENSNLEG00000016578	GAR1	50	96.330	ENSCGRG00001003919	Gar1	50	96.364	Cricetulus_griseus_chok1gshd
ENSNLEG00000016578	GAR1	50	93.458	ENSCSEG00000003525	gar1	50	91.818	Cynoglossus_semilaevis
ENSNLEG00000016578	GAR1	50	94.393	ENSCVAG00000002103	gar1	53	92.727	Cyprinodon_variegatus
ENSNLEG00000016578	GAR1	50	91.589	ENSDARG00000076526	gar1	68	76.471	Danio_rerio
ENSNLEG00000016578	GAR1	50	99.083	ENSDNOG00000037632	GAR1	56	99.091	Dasypus_novemcinctus
ENSNLEG00000016578	GAR1	67	91.667	ENSDORG00000000482	Gar1	66	91.667	Dipodomys_ordii
ENSNLEG00000016578	GAR1	51	98.182	ENSEASG00005004658	GAR1	51	98.182	Equus_asinus_asinus
ENSNLEG00000016578	GAR1	51	99.091	ENSECAG00000013624	GAR1	56	99.091	Equus_caballus
ENSNLEG00000016578	GAR1	50	99.083	ENSFCAG00000040791	-	53	99.091	Felis_catus
ENSNLEG00000016578	GAR1	60	57.692	ENSFCAG00000025841	-	52	65.455	Felis_catus
ENSNLEG00000016578	GAR1	51	91.892	ENSFHEG00000008068	gar1	51	91.818	Fundulus_heteroclitus
ENSNLEG00000016578	GAR1	50	94.393	ENSGAFG00000016833	gar1	65	83.007	Gambusia_affinis
ENSNLEG00000016578	GAR1	51	80.180	ENSGGOG00000036205	-	54	80.734	Gorilla_gorilla
ENSNLEG00000016578	GAR1	100	97.696	ENSGGOG00000008681	GAR1	100	97.696	Gorilla_gorilla
ENSNLEG00000016578	GAR1	50	98.131	ENSHGLG00000000493	GAR1	99	97.333	Heterocephalus_glaber_female
ENSNLEG00000016578	GAR1	51	90.000	ENSIPUG00000003194	gar1	52	90.000	Ictalurus_punctatus
ENSNLEG00000016578	GAR1	50	97.248	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSNLEG00000016578	GAR1	51	89.189	ENSKMAG00000010402	gar1	52	90.000	Kryptolebias_marmoratus
ENSNLEG00000016578	GAR1	100	97.696	ENSMFAG00000024592	GAR1	100	97.696	Macaca_fascicularis
ENSNLEG00000016578	GAR1	50	84.259	ENSMFAG00000003572	-	54	82.727	Macaca_fascicularis
ENSNLEG00000016578	GAR1	100	97.696	ENSMMUG00000021225	GAR1	100	97.696	Macaca_mulatta
ENSNLEG00000016578	GAR1	100	97.696	ENSMNEG00000042594	GAR1	100	97.696	Macaca_nemestrina
ENSNLEG00000016578	GAR1	99	97.209	ENSMLEG00000002496	GAR1	99	97.209	Mandrillus_leucophaeus
ENSNLEG00000016578	GAR1	59	87.402	ENSMAUG00000016788	Gar1	70	98.182	Mesocricetus_auratus
ENSNLEG00000016578	GAR1	52	98.214	ENSMICG00000003326	GAR1	51	99.091	Microcebus_murinus
ENSNLEG00000016578	GAR1	50	95.413	ENSMOCG00000001340	Gar1	70	100.000	Microtus_ochrogaster
ENSNLEG00000016578	GAR1	50	95.327	ENSMMOG00000004156	gar1	52	95.327	Mola_mola
ENSNLEG00000016578	GAR1	69	75.168	ENSMALG00000009672	gar1	50	93.458	Monopterus_albus
ENSNLEG00000016578	GAR1	50	96.330	MGP_CAROLIEiJ_G0025627	Gar1	70	100.000	Mus_caroli
ENSNLEG00000016578	GAR1	51	96.364	ENSMUSG00000028010	Gar1	70	100.000	Mus_musculus
ENSNLEG00000016578	GAR1	89	92.228	MGP_PahariEiJ_G0027076	Gar1	100	94.149	Mus_pahari
ENSNLEG00000016578	GAR1	51	96.364	MGP_SPRETEiJ_G0026580	Gar1	70	100.000	Mus_spretus
ENSNLEG00000016578	GAR1	100	91.818	ENSMPUG00000008615	GAR1	100	91.818	Mustela_putorius_furo
ENSNLEG00000016578	GAR1	51	98.182	ENSNGAG00000008268	Gar1	92	98.592	Nannospalax_galili
ENSNLEG00000016578	GAR1	50	98.131	ENSODEG00000011083	GAR1	57	97.273	Octodon_degus
ENSNLEG00000016578	GAR1	50	94.393	ENSONIG00000001085	gar1	50	92.727	Oreochromis_niloticus
ENSNLEG00000016578	GAR1	50	99.083	ENSOCUG00000003901	GAR1	51	99.091	Oryctolagus_cuniculus
ENSNLEG00000016578	GAR1	50	94.393	ENSORLG00000020583	gar1	50	92.727	Oryzias_latipes
ENSNLEG00000016578	GAR1	50	94.393	ENSORLG00020008602	gar1	50	92.727	Oryzias_latipes_hni
ENSNLEG00000016578	GAR1	50	94.393	ENSORLG00015017643	gar1	50	92.727	Oryzias_latipes_hsok
ENSNLEG00000016578	GAR1	50	99.083	ENSOGAG00000004693	GAR1	52	99.091	Otolemur_garnettii
ENSNLEG00000016578	GAR1	50	99.083	ENSOARG00000004910	GAR1	52	99.091	Ovis_aries
ENSNLEG00000016578	GAR1	100	97.706	ENSPPAG00000014081	GAR1	100	97.706	Pan_paniscus
ENSNLEG00000016578	GAR1	100	91.818	ENSPPRG00000023697	GAR1	100	91.818	Panthera_pardus
ENSNLEG00000016578	GAR1	100	91.818	ENSPTIG00000021565	GAR1	100	91.818	Panthera_tigris_altaica
ENSNLEG00000016578	GAR1	78	65.476	ENSPTRG00000049340	-	75	69.677	Pan_troglodytes
ENSNLEG00000016578	GAR1	100	97.696	ENSPTRG00000016364	GAR1	100	97.696	Pan_troglodytes
ENSNLEG00000016578	GAR1	100	97.696	ENSPANG00000000639	GAR1	100	97.696	Papio_anubis
ENSNLEG00000016578	GAR1	50	96.330	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSNLEG00000016578	GAR1	50	93.458	ENSPFOG00000024155	gar1	52	91.818	Poecilia_formosa
ENSNLEG00000016578	GAR1	50	93.458	ENSPLAG00000015056	gar1	52	91.818	Poecilia_latipinna
ENSNLEG00000016578	GAR1	50	94.393	ENSPMEG00000009320	gar1	53	92.727	Poecilia_mexicana
ENSNLEG00000016578	GAR1	100	97.696	ENSPPYG00000014996	GAR1	100	97.696	Pongo_abelii
ENSNLEG00000016578	GAR1	50	83.178	ENSPCAG00000015897	GAR1	64	82.639	Procavia_capensis
ENSNLEG00000016578	GAR1	50	100.000	ENSPCOG00000027049	GAR1	56	100.000	Propithecus_coquereli
ENSNLEG00000016578	GAR1	78	95.322	ENSRNOG00000061146	Gar1	100	95.322	Rattus_norvegicus
ENSNLEG00000016578	GAR1	52	82.143	ENSRBIG00000042411	-	53	81.818	Rhinopithecus_bieti
ENSNLEG00000016578	GAR1	100	97.235	ENSRBIG00000019547	GAR1	100	97.235	Rhinopithecus_bieti
ENSNLEG00000016578	GAR1	52	82.143	ENSRROG00000044348	-	53	81.818	Rhinopithecus_roxellana
ENSNLEG00000016578	GAR1	100	97.696	ENSRROG00000028454	GAR1	100	97.696	Rhinopithecus_roxellana
ENSNLEG00000016578	GAR1	56	52.846	YHR089C	-	84	47.651	Saccharomyces_cerevisiae
ENSNLEG00000016578	GAR1	50	100.000	ENSSBOG00000024785	GAR1	51	100.000	Saimiri_boliviensis_boliviensis
ENSNLEG00000016578	GAR1	50	91.589	ENSSMAG00000009976	gar1	50	90.000	Scophthalmus_maximus
ENSNLEG00000016578	GAR1	50	93.458	ENSSLDG00000023264	gar1	52	91.818	Seriola_lalandi_dorsalis
ENSNLEG00000016578	GAR1	50	94.393	ENSSPAG00000005974	gar1	51	91.453	Stegastes_partitus
ENSNLEG00000016578	GAR1	51	99.091	ENSSSCG00000009137	GAR1	54	99.091	Sus_scrofa
ENSNLEG00000016578	GAR1	50	90.654	ENSTRUG00000020580	gar1	53	89.091	Takifugu_rubripes
ENSNLEG00000016578	GAR1	87	92.593	ENSUAMG00000005652	GAR1	94	92.593	Ursus_americanus
ENSNLEG00000016578	GAR1	100	90.909	ENSUMAG00000000776	GAR1	100	90.909	Ursus_maritimus
ENSNLEG00000016578	GAR1	50	99.083	ENSVVUG00000017612	GAR1	57	99.091	Vulpes_vulpes
ENSNLEG00000016578	GAR1	50	94.393	ENSXCOG00000014843	GAR1	66	84.615	Xiphophorus_couchianus
ENSNLEG00000016578	GAR1	50	94.393	ENSXMAG00000002316	GAR1	66	84.615	Xiphophorus_maculatus