EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000016647 (Gene tree)
Gene ID: 100589951
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 18399 bases
Position: chr8:92164822-92183220
Accession: 100589951
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000031958	PRP4	PF08799.11	6.7e-14	1	1
ENSNLEP00000020215	PRP4	PF08799.11	7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000021225	PRPF4-202	1617	-	ENSNLEP00000020215	538 (aa)	-	G1S3X7
ENSNLET00000059135	PRPF4-201	3195	XM_003264024	ENSNLEP00000031958	521 (aa)	XP_003264072	A0A2I3GKW2

Gene Model

Click here to download ENSNLEG00000016647's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000016647's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000016647	PRPF4	56	31.852	ENSNLEG00000007084	POC1A	81	30.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000016647	PRPF4	100	99.616	ENSG00000136875	PRPF4	100	99.616	Homo_sapiens
ENSNLEG00000016647	PRPF4	96	77.406	ENSAPOG00000014132	prpf4	98	77.406	Acanthochromis_polyacanthus
ENSNLEG00000016647	PRPF4	100	99.808	ENSAMEG00000013048	PRPF4	100	98.505	Ailuropoda_melanoleuca
ENSNLEG00000016647	PRPF4	96	77.183	ENSACIG00000005579	prpf4	99	77.183	Amphilophus_citrinellus
ENSNLEG00000016647	PRPF4	96	76.832	ENSAOCG00000005457	prpf4	99	76.832	Amphiprion_ocellaris
ENSNLEG00000016647	PRPF4	96	76.634	ENSAPEG00000000776	prpf4	99	76.634	Amphiprion_percula
ENSNLEG00000016647	PRPF4	96	76.587	ENSATEG00000023013	prpf4	99	76.587	Anabas_testudineus
ENSNLEG00000016647	PRPF4	100	89.251	ENSAPLG00000006534	PRPF4	98	88.952	Anas_platyrhynchos
ENSNLEG00000016647	PRPF4	100	90.057	ENSACAG00000015110	PRPF4	100	90.057	Anolis_carolinensis
ENSNLEG00000016647	PRPF4	100	100.000	ENSANAG00000022464	PRPF4	100	98.155	Aotus_nancymaae
ENSNLEG00000016647	PRPF4	96	76.984	ENSACLG00000019031	prpf4	99	76.984	Astatotilapia_calliptera
ENSNLEG00000016647	PRPF4	97	62.380	ENSAMXG00000006756	prpf4	99	73.465	Astyanax_mexicanus
ENSNLEG00000016647	PRPF4	100	99.040	ENSBTAG00000004571	PRPF4	100	99.040	Bos_taurus
ENSNLEG00000016647	PRPF4	90	44.000	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSNLEG00000016647	PRPF4	100	99.808	ENSCJAG00000017856	PRPF4	100	99.808	Callithrix_jacchus
ENSNLEG00000016647	PRPF4	100	99.808	ENSCAFG00000003224	PRPF4	100	98.513	Canis_familiaris
ENSNLEG00000016647	PRPF4	100	99.808	ENSCAFG00020022637	PRPF4	100	99.808	Canis_lupus_dingo
ENSNLEG00000016647	PRPF4	100	99.234	ENSCHIG00000024648	-	100	99.234	Capra_hircus
ENSNLEG00000016647	PRPF4	100	99.616	ENSTSYG00000010366	PRPF4	100	99.616	Carlito_syrichta
ENSNLEG00000016647	PRPF4	88	88.544	ENSCAPG00000008935	PRPF4	97	88.544	Cavia_aperea
ENSNLEG00000016647	PRPF4	100	92.706	ENSCPOG00000014729	-	100	92.706	Cavia_porcellus
ENSNLEG00000016647	PRPF4	100	99.232	ENSCPOG00000010747	-	100	99.232	Cavia_porcellus
ENSNLEG00000016647	PRPF4	100	99.808	ENSCCAG00000028990	PRPF4	100	99.808	Cebus_capucinus
ENSNLEG00000016647	PRPF4	100	99.616	ENSCATG00000021552	PRPF4	100	99.616	Cercocebus_atys
ENSNLEG00000016647	PRPF4	100	99.424	ENSCLAG00000013448	PRPF4	100	99.424	Chinchilla_lanigera
ENSNLEG00000016647	PRPF4	87	95.796	ENSCHOG00000007233	PRPF4	100	95.796	Choloepus_hoffmanni
ENSNLEG00000016647	PRPF4	99	91.456	ENSCPBG00000019136	PRPF4	79	87.500	Chrysemys_picta_bellii
ENSNLEG00000016647	PRPF4	96	59.252	ENSCING00000001299	-	97	58.614	Ciona_intestinalis
ENSNLEG00000016647	PRPF4	96	57.540	ENSCSAVG00000009178	-	99	58.874	Ciona_savignyi
ENSNLEG00000016647	PRPF4	100	99.808	ENSCANG00000003246	PRPF4	100	99.808	Colobus_angolensis_palliatus
ENSNLEG00000016647	PRPF4	100	99.616	ENSCGRG00001016992	Prpf4	100	99.616	Cricetulus_griseus_chok1gshd
ENSNLEG00000016647	PRPF4	100	99.616	ENSCGRG00000017560	Prpf4	100	99.616	Cricetulus_griseus_crigri
ENSNLEG00000016647	PRPF4	97	75.842	ENSCSEG00000020451	prpf4	99	75.842	Cynoglossus_semilaevis
ENSNLEG00000016647	PRPF4	97	79.802	ENSDARG00000067639	prpf4	99	79.802	Danio_rerio
ENSNLEG00000016647	PRPF4	100	99.234	ENSDNOG00000013203	PRPF4	100	99.234	Dasypus_novemcinctus
ENSNLEG00000016647	PRPF4	100	99.616	ENSDORG00000026275	Prpf4	100	99.616	Dipodomys_ordii
ENSNLEG00000016647	PRPF4	87	56.674	FBgn0036733	U4-U6-60K	99	50.547	Drosophila_melanogaster
ENSNLEG00000016647	PRPF4	100	97.514	ENSETEG00000020389	PRPF4	100	97.514	Echinops_telfairi
ENSNLEG00000016647	PRPF4	95	73.041	ENSEBUG00000015229	prpf4	86	73.502	Eptatretus_burgeri
ENSNLEG00000016647	PRPF4	100	100.000	ENSEASG00005022678	PRPF4	100	100.000	Equus_asinus_asinus
ENSNLEG00000016647	PRPF4	100	100.000	ENSECAG00000007072	PRPF4	100	100.000	Equus_caballus
ENSNLEG00000016647	PRPF4	100	78.603	ENSEEUG00000007480	PRPF4	100	78.603	Erinaceus_europaeus
ENSNLEG00000016647	PRPF4	97	80.792	ENSELUG00000007510	prpf4	99	80.792	Esox_lucius
ENSNLEG00000016647	PRPF4	100	99.808	ENSFCAG00000005514	PRPF4	100	99.808	Felis_catus
ENSNLEG00000016647	PRPF4	98	88.341	ENSFALG00000005423	PRPF4	90	85.591	Ficedula_albicollis
ENSNLEG00000016647	PRPF4	100	99.232	ENSFDAG00000005839	PRPF4	100	99.232	Fukomys_damarensis
ENSNLEG00000016647	PRPF4	96	76.190	ENSFHEG00000001300	prpf4	99	76.190	Fundulus_heteroclitus
ENSNLEG00000016647	PRPF4	98	90.215	ENSGALG00000008857	PRPF4	98	88.280	Gallus_gallus
ENSNLEG00000016647	PRPF4	65	71.176	ENSGAFG00000012164	prpf4	70	71.176	Gambusia_affinis
ENSNLEG00000016647	PRPF4	96	69.643	ENSGACG00000015476	prpf4	99	68.849	Gasterosteus_aculeatus
ENSNLEG00000016647	PRPF4	99	91.262	ENSGAGG00000025029	PRPF4	97	90.095	Gopherus_agassizii
ENSNLEG00000016647	PRPF4	100	99.616	ENSGGOG00000006943	PRPF4	100	99.616	Gorilla_gorilla
ENSNLEG00000016647	PRPF4	96	76.786	ENSHBUG00000000562	prpf4	99	76.786	Haplochromis_burtoni
ENSNLEG00000016647	PRPF4	100	80.614	ENSHGLG00000003838	-	100	80.614	Heterocephalus_glaber_female
ENSNLEG00000016647	PRPF4	100	82.027	ENSHGLG00000016628	-	100	82.792	Heterocephalus_glaber_female
ENSNLEG00000016647	PRPF4	100	99.232	ENSHGLG00000015191	PRPF4	100	99.232	Heterocephalus_glaber_female
ENSNLEG00000016647	PRPF4	100	80.614	ENSHGLG00100005571	-	100	80.614	Heterocephalus_glaber_male
ENSNLEG00000016647	PRPF4	97	78.812	ENSIPUG00000017956	PRPF4	99	78.812	Ictalurus_punctatus
ENSNLEG00000016647	PRPF4	100	99.424	ENSSTOG00000027833	PRPF4	100	99.424	Ictidomys_tridecemlineatus
ENSNLEG00000016647	PRPF4	100	99.616	ENSJJAG00000008838	Prpf4	100	99.616	Jaculus_jaculus
ENSNLEG00000016647	PRPF4	96	76.190	ENSKMAG00000013236	prpf4	99	76.190	Kryptolebias_marmoratus
ENSNLEG00000016647	PRPF4	96	75.896	ENSLBEG00000020611	prpf4	99	75.896	Labrus_bergylta
ENSNLEG00000016647	PRPF4	99	80.347	ENSLACG00000016317	PRPF4	99	80.347	Latimeria_chalumnae
ENSNLEG00000016647	PRPF4	97	81.782	ENSLOCG00000000581	prpf4	99	81.782	Lepisosteus_oculatus
ENSNLEG00000016647	PRPF4	100	99.042	ENSLAFG00000018225	PRPF4	100	99.042	Loxodonta_africana
ENSNLEG00000016647	PRPF4	100	99.424	ENSMFAG00000039397	PRPF4	100	99.424	Macaca_fascicularis
ENSNLEG00000016647	PRPF4	100	99.616	ENSMMUG00000005844	PRPF4	100	99.616	Macaca_mulatta
ENSNLEG00000016647	PRPF4	100	89.060	ENSMNEG00000033737	PRPF4	100	89.060	Macaca_nemestrina
ENSNLEG00000016647	PRPF4	100	99.616	ENSMLEG00000040284	PRPF4	100	99.616	Mandrillus_leucophaeus
ENSNLEG00000016647	PRPF4	97	76.134	ENSMAMG00000020141	prpf4	99	76.134	Mastacembelus_armatus
ENSNLEG00000016647	PRPF4	96	76.984	ENSMZEG00005023205	prpf4	99	76.984	Maylandia_zebra
ENSNLEG00000016647	PRPF4	99	88.462	ENSMGAG00000001796	PRPF4	99	87.902	Meleagris_gallopavo
ENSNLEG00000016647	PRPF4	100	99.040	ENSMAUG00000018022	Prpf4	100	99.040	Mesocricetus_auratus
ENSNLEG00000016647	PRPF4	100	98.848	ENSMICG00000015022	PRPF4	100	98.659	Microcebus_murinus
ENSNLEG00000016647	PRPF4	100	99.040	ENSMOCG00000018273	Prpf4	100	99.040	Microtus_ochrogaster
ENSNLEG00000016647	PRPF4	97	74.851	ENSMMOG00000021177	prpf4	99	74.851	Mola_mola
ENSNLEG00000016647	PRPF4	100	95.220	ENSMODG00000025096	-	99	93.482	Monodelphis_domestica
ENSNLEG00000016647	PRPF4	100	95.029	ENSMODG00000004444	-	100	95.029	Monodelphis_domestica
ENSNLEG00000016647	PRPF4	96	76.587	ENSMALG00000013624	prpf4	99	76.587	Monopterus_albus
ENSNLEG00000016647	PRPF4	100	99.424	MGP_CAROLIEiJ_G0026078	Prpf4	100	99.424	Mus_caroli
ENSNLEG00000016647	PRPF4	100	99.424	ENSMUSG00000066148	Prpf4	100	99.424	Mus_musculus
ENSNLEG00000016647	PRPF4	100	99.232	MGP_PahariEiJ_G0028413	Prpf4	100	99.232	Mus_pahari
ENSNLEG00000016647	PRPF4	100	99.424	MGP_SPRETEiJ_G0027042	Prpf4	100	99.424	Mus_spretus
ENSNLEG00000016647	PRPF4	100	99.808	ENSMPUG00000007883	PRPF4	100	99.808	Mustela_putorius_furo
ENSNLEG00000016647	PRPF4	100	99.424	ENSMLUG00000015309	-	99	98.502	Myotis_lucifugus
ENSNLEG00000016647	PRPF4	100	97.505	ENSMLUG00000008626	-	99	96.786	Myotis_lucifugus
ENSNLEG00000016647	PRPF4	100	94.242	ENSNGAG00000000468	Prpf4	100	94.242	Nannospalax_galili
ENSNLEG00000016647	PRPF4	96	77.183	ENSNBRG00000007972	prpf4	99	77.183	Neolamprologus_brichardi
ENSNLEG00000016647	PRPF4	99	95.136	ENSMEUG00000013256	PRPF4	100	95.136	Notamacropus_eugenii
ENSNLEG00000016647	PRPF4	100	99.042	ENSOPRG00000005302	PRPF4	100	99.042	Ochotona_princeps
ENSNLEG00000016647	PRPF4	100	99.616	ENSODEG00000018147	PRPF4	100	99.616	Octodon_degus
ENSNLEG00000016647	PRPF4	99	75.287	ENSONIG00000012671	prpf4	99	76.984	Oreochromis_niloticus
ENSNLEG00000016647	PRPF4	100	99.808	ENSOCUG00000005046	PRPF4	100	99.808	Oryctolagus_cuniculus
ENSNLEG00000016647	PRPF4	96	74.900	ENSORLG00000019641	prpf4	99	74.900	Oryzias_latipes
ENSNLEG00000016647	PRPF4	96	74.900	ENSORLG00020019438	prpf4	99	74.900	Oryzias_latipes_hni
ENSNLEG00000016647	PRPF4	96	74.737	ENSOMEG00000020941	prpf4	99	74.737	Oryzias_melastigma
ENSNLEG00000016647	PRPF4	100	94.626	ENSOGAG00000007802	PRPF4	99	94.129	Otolemur_garnettii
ENSNLEG00000016647	PRPF4	100	99.424	ENSOARG00000006319	PRPF4	100	98.701	Ovis_aries
ENSNLEG00000016647	PRPF4	100	99.616	ENSPPAG00000041797	PRPF4	100	99.616	Pan_paniscus
ENSNLEG00000016647	PRPF4	100	100.000	ENSPPRG00000014360	PRPF4	100	100.000	Panthera_pardus
ENSNLEG00000016647	PRPF4	100	100.000	ENSPTIG00000009574	PRPF4	100	100.000	Panthera_tigris_altaica
ENSNLEG00000016647	PRPF4	100	99.616	ENSPTRG00000021274	PRPF4	100	99.425	Pan_troglodytes
ENSNLEG00000016647	PRPF4	100	99.424	ENSPANG00000025776	PRPF4	100	98.343	Papio_anubis
ENSNLEG00000016647	PRPF4	97	81.188	ENSPKIG00000017259	prpf4	99	81.188	Paramormyrops_kingsleyae
ENSNLEG00000016647	PRPF4	100	89.827	ENSPSIG00000010713	PRPF4	91	90.347	Pelodiscus_sinensis
ENSNLEG00000016647	PRPF4	99	58.608	ENSPMGG00000000997	prpf4	99	58.716	Periophthalmus_magnuspinnatus
ENSNLEG00000016647	PRPF4	100	99.616	ENSPEMG00000024115	Prpf4	100	99.616	Peromyscus_maniculatus_bairdii
ENSNLEG00000016647	PRPF4	99	95.136	ENSPCIG00000003821	PRPF4	99	95.136	Phascolarctos_cinereus
ENSNLEG00000016647	PRPF4	96	70.020	ENSPFOG00000013524	prpf4	98	72.981	Poecilia_formosa
ENSNLEG00000016647	PRPF4	83	71.560	ENSPLAG00000011620	prpf4	96	72.050	Poecilia_latipinna
ENSNLEG00000016647	PRPF4	92	74.096	ENSPMEG00000006813	prpf4	98	74.096	Poecilia_mexicana
ENSNLEG00000016647	PRPF4	98	99.415	ENSPCAG00000002561	PRPF4	99	99.415	Procavia_capensis
ENSNLEG00000016647	PRPF4	100	99.424	ENSPCOG00000011975	PRPF4	100	99.424	Propithecus_coquereli
ENSNLEG00000016647	PRPF4	100	95.785	ENSPVAG00000004708	PRPF4	100	95.785	Pteropus_vampyrus
ENSNLEG00000016647	PRPF4	96	76.984	ENSPNYG00000008013	prpf4	99	76.984	Pundamilia_nyererei
ENSNLEG00000016647	PRPF4	97	80.396	ENSPNAG00000000697	prpf4	99	80.396	Pygocentrus_nattereri
ENSNLEG00000016647	PRPF4	100	99.232	ENSRNOG00000014777	Prpf4	100	99.232	Rattus_norvegicus
ENSNLEG00000016647	PRPF4	100	99.808	ENSRBIG00000040221	PRPF4	100	99.808	Rhinopithecus_bieti
ENSNLEG00000016647	PRPF4	100	99.808	ENSRROG00000040240	PRPF4	100	99.808	Rhinopithecus_roxellana
ENSNLEG00000016647	PRPF4	100	95.602	ENSSHAG00000017658	PRPF4	100	95.602	Sarcophilus_harrisii
ENSNLEG00000016647	PRPF4	97	81.980	ENSSFOG00015008963	prpf4	99	81.980	Scleropages_formosus
ENSNLEG00000016647	PRPF4	96	75.595	ENSSMAG00000008889	prpf4	99	75.595	Scophthalmus_maximus
ENSNLEG00000016647	PRPF4	96	73.506	ENSSDUG00000022083	prpf4	98	73.705	Seriola_dumerili
ENSNLEG00000016647	PRPF4	96	73.705	ENSSLDG00000008115	prpf4	98	73.904	Seriola_lalandi_dorsalis
ENSNLEG00000016647	PRPF4	100	90.595	ENSSPUG00000015582	PRPF4	100	90.595	Sphenodon_punctatus
ENSNLEG00000016647	PRPF4	96	71.203	ENSSPAG00000011286	prpf4	99	71.203	Stegastes_partitus
ENSNLEG00000016647	PRPF4	100	100.000	ENSSSCG00000024648	PRPF4	100	100.000	Sus_scrofa
ENSNLEG00000016647	PRPF4	95	90.467	ENSTGUG00000002623	PRPF4	100	90.798	Taeniopygia_guttata
ENSNLEG00000016647	PRPF4	97	75.494	ENSTRUG00000008853	prpf4	99	75.494	Takifugu_rubripes
ENSNLEG00000016647	PRPF4	97	74.851	ENSTNIG00000013250	prpf4	99	74.851	Tetraodon_nigroviridis
ENSNLEG00000016647	PRPF4	100	90.805	ENSTBEG00000000821	PRPF4	100	90.805	Tupaia_belangeri
ENSNLEG00000016647	PRPF4	82	99.329	ENSTTRG00000003246	PRPF4	85	99.329	Tursiops_truncatus
ENSNLEG00000016647	PRPF4	64	96.707	ENSUAMG00000018288	PRPF4	90	96.707	Ursus_americanus
ENSNLEG00000016647	PRPF4	100	99.040	ENSUMAG00000019375	PRPF4	100	99.040	Ursus_maritimus
ENSNLEG00000016647	PRPF4	100	99.234	ENSVPAG00000005281	PRPF4	100	99.234	Vicugna_pacos
ENSNLEG00000016647	PRPF4	100	98.667	ENSVVUG00000002476	PRPF4	100	98.667	Vulpes_vulpes
ENSNLEG00000016647	PRPF4	69	58.056	ENSXCOG00000006101	prpf4	93	59.360	Xiphophorus_couchianus
ENSNLEG00000016647	PRPF4	88	64.410	ENSXMAG00000002750	prpf4	98	65.408	Xiphophorus_maculatus