EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000016909 (Gene tree)
Gene ID: 100588470
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 38866 bases
Position: chr1a:37844445-37883310
Accession: 100588470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000020555	MIF4G_like	PF09088.11	2.6e-36	1	1
ENSNLEP00000032146	MIF4G_like	PF09088.11	2.6e-36	1	1
ENSNLEP00000025885	MIF4G_like	PF09088.11	8.3e-36	1	1
ENSNLEP00000047933	MIF4G_like	PF09088.11	8.7e-36	1	1
ENSNLEP00000032146	MIF4G_like_2	PF09090.11	2.4e-85	1	1
ENSNLEP00000020555	MIF4G_like_2	PF09090.11	2.4e-85	1	1
ENSNLEP00000025885	MIF4G_like_2	PF09090.11	4e-85	1	1
ENSNLEP00000047933	MIF4G_like_2	PF09090.11	4.3e-85	1	1
ENSNLEP00000020555	MIF4G	PF02854.19	1.3e-30	1	1
ENSNLEP00000032146	MIF4G	PF02854.19	1.3e-30	1	1
ENSNLEP00000047933	MIF4G	PF02854.19	1.3e-23	1	1
ENSNLEP00000025885	MIF4G	PF02854.19	3.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000052296	NCBP1-205	249	-	ENSNLEP00000041739	82 (aa)	-	A0A2I3HDL9
ENSNLET00000021579	NCBP1-202	2370	-	ENSNLEP00000020555	789 (aa)	-	G1S4W7
ENSNLET00000057947	NCBP1-204	2115	-	ENSNLEP00000025885	704 (aa)	-	A0A2I3G0S7
ENSNLET00000048222	NCBP1-203	2172	-	ENSNLEP00000047933	723 (aa)	-	A0A2I3HWH4
ENSNLET00000041593	NCBP1-201	3247	XM_003260538	ENSNLEP00000032146	790 (aa)	XP_003260586	A0A2I3GLG5

Gene Model

Click here to download ENSNLEG00000016909's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03013	RNA transport	KEGG
nle03015	mRNA surveillance pathway	KEGG
nle03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000016909's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000016909	NCBP1	100	100.000	ENSG00000136937	NCBP1	100	100.000	Homo_sapiens
ENSNLEG00000016909	NCBP1	99	83.627	ENSAPOG00000008002	NCBP1	99	82.997	Acanthochromis_polyacanthus
ENSNLEG00000016909	NCBP1	100	99.242	ENSAMEG00000004763	NCBP1	100	99.242	Ailuropoda_melanoleuca
ENSNLEG00000016909	NCBP1	99	83.985	ENSACIG00000000274	NCBP1	99	83.354	Amphilophus_citrinellus
ENSNLEG00000016909	NCBP1	99	83.753	ENSAOCG00000021148	NCBP1	99	83.123	Amphiprion_ocellaris
ENSNLEG00000016909	NCBP1	99	83.753	ENSAPEG00000001701	NCBP1	99	83.123	Amphiprion_percula
ENSNLEG00000016909	NCBP1	99	83.123	ENSATEG00000006929	NCBP1	99	82.746	Anabas_testudineus
ENSNLEG00000016909	NCBP1	99	90.691	ENSAPLG00000016318	NCBP1	100	90.753	Anas_platyrhynchos
ENSNLEG00000016909	NCBP1	100	87.266	ENSACAG00000004409	NCBP1	87	87.141	Anolis_carolinensis
ENSNLEG00000016909	NCBP1	100	99.862	ENSANAG00000025744	NCBP1	100	99.862	Aotus_nancymaae
ENSNLEG00000016909	NCBP1	99	83.123	ENSACLG00000014812	NCBP1	99	82.961	Astatotilapia_calliptera
ENSNLEG00000016909	NCBP1	99	81.784	ENSAMXG00000016364	NCBP1	99	81.281	Astyanax_mexicanus
ENSNLEG00000016909	NCBP1	100	99.114	ENSBTAG00000009732	NCBP1	100	99.114	Bos_taurus
ENSNLEG00000016909	NCBP1	99	34.772	WBGene00018156	ncbp-1	99	34.279	Caenorhabditis_elegans
ENSNLEG00000016909	NCBP1	100	99.747	ENSCJAG00000010840	NCBP1	100	100.000	Callithrix_jacchus
ENSNLEG00000016909	NCBP1	100	99.620	ENSCAFG00000002445	NCBP1	100	99.620	Canis_familiaris
ENSNLEG00000016909	NCBP1	100	99.447	ENSCAFG00020017997	NCBP1	100	99.561	Canis_lupus_dingo
ENSNLEG00000016909	NCBP1	100	98.861	ENSCHIG00000020139	NCBP1	100	98.861	Capra_hircus
ENSNLEG00000016909	NCBP1	51	99.504	ENSTSYG00000011914	NCBP1	99	99.071	Carlito_syrichta
ENSNLEG00000016909	NCBP1	89	89.314	ENSCAPG00000014252	NCBP1	91	88.975	Cavia_aperea
ENSNLEG00000016909	NCBP1	99	99.441	ENSCPOG00000012573	NCBP1	99	97.653	Cavia_porcellus
ENSNLEG00000016909	NCBP1	100	99.873	ENSCCAG00000032297	NCBP1	100	99.873	Cebus_capucinus
ENSNLEG00000016909	NCBP1	100	100.000	ENSCATG00000010052	NCBP1	100	100.000	Cercocebus_atys
ENSNLEG00000016909	NCBP1	100	99.620	ENSCLAG00000014339	NCBP1	100	99.620	Chinchilla_lanigera
ENSNLEG00000016909	NCBP1	100	100.000	ENSCSAG00000010929	NCBP1	100	100.000	Chlorocebus_sabaeus
ENSNLEG00000016909	NCBP1	91	96.610	ENSCHOG00000010332	NCBP1	91	96.610	Choloepus_hoffmanni
ENSNLEG00000016909	NCBP1	100	90.110	ENSCPBG00000024344	NCBP1	100	90.247	Chrysemys_picta_bellii
ENSNLEG00000016909	NCBP1	99	54.315	ENSCING00000008990	-	99	54.362	Ciona_intestinalis
ENSNLEG00000016909	NCBP1	99	53.576	ENSCSAVG00000005300	-	99	53.927	Ciona_savignyi
ENSNLEG00000016909	NCBP1	100	100.000	ENSCANG00000036913	NCBP1	100	100.000	Colobus_angolensis_palliatus
ENSNLEG00000016909	NCBP1	100	98.354	ENSCGRG00001015771	Ncbp1	100	98.354	Cricetulus_griseus_chok1gshd
ENSNLEG00000016909	NCBP1	99	98.462	ENSCGRG00000010311	Ncbp1	100	98.462	Cricetulus_griseus_crigri
ENSNLEG00000016909	NCBP1	99	83.024	ENSCSEG00000012377	NCBP1	99	83.077	Cynoglossus_semilaevis
ENSNLEG00000016909	NCBP1	99	80.881	ENSCVAG00000008795	NCBP1	99	81.509	Cyprinodon_variegatus
ENSNLEG00000016909	NCBP1	100	98.354	ENSDNOG00000006885	NCBP1	100	98.354	Dasypus_novemcinctus
ENSNLEG00000016909	NCBP1	99	98.184	ENSDORG00000013652	Ncbp1	100	94.081	Dipodomys_ordii
ENSNLEG00000016909	NCBP1	100	57.391	FBgn0022942	Cbp80	100	57.875	Drosophila_melanogaster
ENSNLEG00000016909	NCBP1	84	33.871	FBgn0038887	CG7907	87	33.871	Drosophila_melanogaster
ENSNLEG00000016909	NCBP1	89	93.668	ENSETEG00000009705	NCBP1	89	93.668	Echinops_telfairi
ENSNLEG00000016909	NCBP1	100	73.711	ENSEBUG00000008386	NCBP1	100	73.459	Eptatretus_burgeri
ENSNLEG00000016909	NCBP1	100	99.114	ENSEASG00005022795	NCBP1	100	99.114	Equus_asinus_asinus
ENSNLEG00000016909	NCBP1	100	99.241	ENSECAG00000013847	NCBP1	100	99.241	Equus_caballus
ENSNLEG00000016909	NCBP1	95	93.891	ENSEEUG00000015973	NCBP1	99	93.493	Erinaceus_europaeus
ENSNLEG00000016909	NCBP1	99	80.881	ENSELUG00000022519	NCBP1	99	81.635	Esox_lucius
ENSNLEG00000016909	NCBP1	100	99.494	ENSFCAG00000001206	NCBP1	100	99.494	Felis_catus
ENSNLEG00000016909	NCBP1	99	90.000	ENSFALG00000001193	NCBP1	100	89.567	Ficedula_albicollis
ENSNLEG00000016909	NCBP1	100	99.367	ENSFDAG00000010864	NCBP1	100	99.367	Fukomys_damarensis
ENSNLEG00000016909	NCBP1	99	82.390	ENSFHEG00000000655	NCBP1	99	81.887	Fundulus_heteroclitus
ENSNLEG00000016909	NCBP1	99	79.623	ENSGMOG00000008653	NCBP1	99	79.623	Gadus_morhua
ENSNLEG00000016909	NCBP1	99	91.323	ENSGALG00000002087	NCBP1	100	90.290	Gallus_gallus
ENSNLEG00000016909	NCBP1	99	82.890	ENSGAFG00000017787	NCBP1	99	82.763	Gambusia_affinis
ENSNLEG00000016909	NCBP1	99	82.203	ENSGACG00000016772	NCBP1	98	81.807	Gasterosteus_aculeatus
ENSNLEG00000016909	NCBP1	100	89.973	ENSGAGG00000019483	NCBP1	100	90.110	Gopherus_agassizii
ENSNLEG00000016909	NCBP1	100	100.000	ENSGGOG00000001376	NCBP1	100	100.000	Gorilla_gorilla
ENSNLEG00000016909	NCBP1	99	83.123	ENSHBUG00000020843	NCBP1	99	82.746	Haplochromis_burtoni
ENSNLEG00000016909	NCBP1	100	99.494	ENSHGLG00000001882	NCBP1	100	99.494	Heterocephalus_glaber_female
ENSNLEG00000016909	NCBP1	100	86.616	ENSHGLG00000018112	-	100	86.616	Heterocephalus_glaber_female
ENSNLEG00000016909	NCBP1	100	99.494	ENSHGLG00100013014	NCBP1	100	99.494	Heterocephalus_glaber_male
ENSNLEG00000016909	NCBP1	100	86.364	ENSHGLG00100017373	-	100	86.364	Heterocephalus_glaber_male
ENSNLEG00000016909	NCBP1	88	72.222	ENSHCOG00000000204	NCBP1	92	72.222	Hippocampus_comes
ENSNLEG00000016909	NCBP1	99	82.264	ENSIPUG00000007275	ncbp1	99	81.887	Ictalurus_punctatus
ENSNLEG00000016909	NCBP1	100	99.367	ENSSTOG00000002695	NCBP1	100	99.367	Ictidomys_tridecemlineatus
ENSNLEG00000016909	NCBP1	99	82.242	ENSKMAG00000003594	NCBP1	99	86.179	Kryptolebias_marmoratus
ENSNLEG00000016909	NCBP1	99	81.242	ENSLBEG00000011661	NCBP1	99	80.745	Labrus_bergylta
ENSNLEG00000016909	NCBP1	100	80.348	ENSLACG00000013955	NCBP1	100	79.851	Latimeria_chalumnae
ENSNLEG00000016909	NCBP1	99	72.319	ENSLOCG00000009579	NCBP1	99	72.319	Lepisosteus_oculatus
ENSNLEG00000016909	NCBP1	100	98.861	ENSLAFG00000005999	NCBP1	100	98.861	Loxodonta_africana
ENSNLEG00000016909	NCBP1	100	100.000	ENSMFAG00000030994	NCBP1	100	100.000	Macaca_fascicularis
ENSNLEG00000016909	NCBP1	100	100.000	ENSMMUG00000012281	NCBP1	100	100.000	Macaca_mulatta
ENSNLEG00000016909	NCBP1	100	100.000	ENSMNEG00000042790	NCBP1	100	100.000	Macaca_nemestrina
ENSNLEG00000016909	NCBP1	100	100.000	ENSMLEG00000030374	NCBP1	100	100.000	Mandrillus_leucophaeus
ENSNLEG00000016909	NCBP1	99	83.375	ENSMAMG00000014806	NCBP1	99	82.872	Mastacembelus_armatus
ENSNLEG00000016909	NCBP1	99	83.123	ENSMZEG00005003469	NCBP1	99	82.746	Maylandia_zebra
ENSNLEG00000016909	NCBP1	99	82.739	ENSMZEG00005009290	-	99	82.682	Maylandia_zebra
ENSNLEG00000016909	NCBP1	99	98.182	ENSMAUG00000020583	Ncbp1	99	97.710	Mesocricetus_auratus
ENSNLEG00000016909	NCBP1	100	99.367	ENSMICG00000012682	NCBP1	100	99.367	Microcebus_murinus
ENSNLEG00000016909	NCBP1	100	97.975	ENSMOCG00000015818	Ncbp1	100	97.975	Microtus_ochrogaster
ENSNLEG00000016909	NCBP1	99	82.493	ENSMMOG00000002610	NCBP1	99	82.353	Mola_mola
ENSNLEG00000016909	NCBP1	99	95.442	ENSMODG00000003202	NCBP1	99	93.544	Monodelphis_domestica
ENSNLEG00000016909	NCBP1	99	82.494	ENSMALG00000003547	NCBP1	99	81.990	Monopterus_albus
ENSNLEG00000016909	NCBP1	100	97.975	MGP_CAROLIEiJ_G0025982	Ncbp1	100	97.975	Mus_caroli
ENSNLEG00000016909	NCBP1	100	97.975	ENSMUSG00000028330	Ncbp1	100	97.975	Mus_musculus
ENSNLEG00000016909	NCBP1	100	98.228	MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	Mus_pahari
ENSNLEG00000016909	NCBP1	100	97.975	MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	Mus_spretus
ENSNLEG00000016909	NCBP1	100	99.494	ENSMPUG00000006399	NCBP1	100	99.494	Mustela_putorius_furo
ENSNLEG00000016909	NCBP1	99	98.322	ENSMLUG00000015201	NCBP1	100	98.074	Myotis_lucifugus
ENSNLEG00000016909	NCBP1	100	98.228	ENSNGAG00000014101	Ncbp1	100	98.228	Nannospalax_galili
ENSNLEG00000016909	NCBP1	76	86.784	ENSNBRG00000014674	NCBP1	97	86.784	Neolamprologus_brichardi
ENSNLEG00000016909	NCBP1	89	94.595	ENSMEUG00000010672	NCBP1	90	92.342	Notamacropus_eugenii
ENSNLEG00000016909	NCBP1	79	100.000	ENSOPRG00000002144	-	83	100.000	Ochotona_princeps
ENSNLEG00000016909	NCBP1	100	99.620	ENSODEG00000003232	NCBP1	100	99.620	Octodon_degus
ENSNLEG00000016909	NCBP1	99	83.123	ENSONIG00000001502	NCBP1	99	82.746	Oreochromis_niloticus
ENSNLEG00000016909	NCBP1	78	97.070	ENSOANG00000001918	NCBP1	100	95.666	Ornithorhynchus_anatinus
ENSNLEG00000016909	NCBP1	98	98.837	ENSOCUG00000013853	NCBP1	97	98.586	Oryctolagus_cuniculus
ENSNLEG00000016909	NCBP1	99	81.203	ENSORLG00000011008	NCBP1	99	80.827	Oryzias_latipes
ENSNLEG00000016909	NCBP1	99	81.203	ENSORLG00020017455	NCBP1	99	80.827	Oryzias_latipes_hni
ENSNLEG00000016909	NCBP1	99	81.328	ENSORLG00015012127	NCBP1	99	80.952	Oryzias_latipes_hsok
ENSNLEG00000016909	NCBP1	99	81.830	ENSOMEG00000020698	NCBP1	99	81.704	Oryzias_melastigma
ENSNLEG00000016909	NCBP1	100	99.495	ENSOGAG00000013888	NCBP1	100	99.495	Otolemur_garnettii
ENSNLEG00000016909	NCBP1	100	98.861	ENSOARG00000011233	NCBP1	100	98.861	Ovis_aries
ENSNLEG00000016909	NCBP1	100	100.000	ENSPPAG00000026462	NCBP1	100	100.000	Pan_paniscus
ENSNLEG00000016909	NCBP1	100	99.620	ENSPPRG00000022574	NCBP1	100	99.620	Panthera_pardus
ENSNLEG00000016909	NCBP1	100	99.620	ENSPTIG00000018507	NCBP1	100	99.620	Panthera_tigris_altaica
ENSNLEG00000016909	NCBP1	100	100.000	ENSPTRG00000021167	NCBP1	100	100.000	Pan_troglodytes
ENSNLEG00000016909	NCBP1	100	100.000	ENSPANG00000025591	NCBP1	100	100.000	Papio_anubis
ENSNLEG00000016909	NCBP1	100	81.132	ENSPKIG00000015861	NCBP1	100	81.006	Paramormyrops_kingsleyae
ENSNLEG00000016909	NCBP1	72	89.453	ENSPSIG00000009558	NCBP1	100	89.648	Pelodiscus_sinensis
ENSNLEG00000016909	NCBP1	99	79.723	ENSPMGG00000020476	NCBP1	99	79.219	Periophthalmus_magnuspinnatus
ENSNLEG00000016909	NCBP1	100	97.848	ENSPEMG00000020105	Ncbp1	100	97.848	Peromyscus_maniculatus_bairdii
ENSNLEG00000016909	NCBP1	100	67.746	ENSPMAG00000005533	NCBP1	100	67.746	Petromyzon_marinus
ENSNLEG00000016909	NCBP1	99	95.157	ENSPCIG00000015800	NCBP1	99	94.512	Phascolarctos_cinereus
ENSNLEG00000016909	NCBP1	99	82.080	ENSPFOG00000004158	NCBP1	99	81.704	Poecilia_formosa
ENSNLEG00000016909	NCBP1	99	82.516	ENSPLAG00000020002	NCBP1	99	82.138	Poecilia_latipinna
ENSNLEG00000016909	NCBP1	99	82.516	ENSPMEG00000019821	NCBP1	99	82.138	Poecilia_mexicana
ENSNLEG00000016909	NCBP1	99	82.412	ENSPREG00000006035	NCBP1	99	82.035	Poecilia_reticulata
ENSNLEG00000016909	NCBP1	100	100.000	ENSPPYG00000019426	NCBP1	100	100.000	Pongo_abelii
ENSNLEG00000016909	NCBP1	88	99.219	ENSPCAG00000009943	NCBP1	85	99.310	Procavia_capensis
ENSNLEG00000016909	NCBP1	90	99.281	ENSPCOG00000020024	NCBP1	99	99.187	Propithecus_coquereli
ENSNLEG00000016909	NCBP1	100	98.987	ENSPVAG00000005924	NCBP1	100	98.987	Pteropus_vampyrus
ENSNLEG00000016909	NCBP1	99	83.024	ENSPNYG00000002140	NCBP1	99	82.961	Pundamilia_nyererei
ENSNLEG00000016909	NCBP1	99	82.553	ENSPNAG00000027753	NCBP1	99	82.035	Pygocentrus_nattereri
ENSNLEG00000016909	NCBP1	100	98.101	ENSRNOG00000023605	Ncbp1	100	98.101	Rattus_norvegicus
ENSNLEG00000016909	NCBP1	100	100.000	ENSRBIG00000043175	NCBP1	100	100.000	Rhinopithecus_bieti
ENSNLEG00000016909	NCBP1	100	100.000	ENSRROG00000029767	NCBP1	100	100.000	Rhinopithecus_roxellana
ENSNLEG00000016909	NCBP1	100	99.873	ENSSBOG00000019378	NCBP1	100	99.873	Saimiri_boliviensis_boliviensis
ENSNLEG00000016909	NCBP1	99	61.166	ENSSHAG00000015882	NCBP1	73	95.331	Sarcophilus_harrisii
ENSNLEG00000016909	NCBP1	99	81.386	ENSSFOG00015001872	NCBP1	100	80.563	Scleropages_formosus
ENSNLEG00000016909	NCBP1	99	81.870	ENSSMAG00000007463	NCBP1	99	81.612	Scophthalmus_maximus
ENSNLEG00000016909	NCBP1	99	83.270	ENSSDUG00000007019	NCBP1	100	82.853	Seriola_dumerili
ENSNLEG00000016909	NCBP1	99	82.997	ENSSLDG00000021924	NCBP1	99	82.620	Seriola_lalandi_dorsalis
ENSNLEG00000016909	NCBP1	79	97.000	ENSSARG00000007274	NCBP1	87	90.830	Sorex_araneus
ENSNLEG00000016909	NCBP1	100	82.152	ENSSPUG00000008609	NCBP1	100	82.152	Sphenodon_punctatus
ENSNLEG00000016909	NCBP1	99	83.501	ENSSPAG00000012550	NCBP1	99	83.123	Stegastes_partitus
ENSNLEG00000016909	NCBP1	100	99.494	ENSSSCG00000005366	NCBP1	100	99.494	Sus_scrofa
ENSNLEG00000016909	NCBP1	100	83.899	ENSTGUG00000001472	NCBP1	100	84.025	Taeniopygia_guttata
ENSNLEG00000016909	NCBP1	99	82.011	ENSTRUG00000005287	NCBP1	99	81.612	Takifugu_rubripes
ENSNLEG00000016909	NCBP1	100	95.949	ENSTBEG00000004035	NCBP1	100	95.949	Tupaia_belangeri
ENSNLEG00000016909	NCBP1	88	99.507	ENSTTRG00000000507	NCBP1	88	99.507	Tursiops_truncatus
ENSNLEG00000016909	NCBP1	100	99.494	ENSUAMG00000005471	NCBP1	100	99.494	Ursus_americanus
ENSNLEG00000016909	NCBP1	100	96.828	ENSUMAG00000011865	NCBP1	100	99.561	Ursus_maritimus
ENSNLEG00000016909	NCBP1	99	99.441	ENSVPAG00000010537	NCBP1	100	95.190	Vicugna_pacos
ENSNLEG00000016909	NCBP1	100	99.620	ENSVVUG00000019725	NCBP1	100	99.620	Vulpes_vulpes
ENSNLEG00000016909	NCBP1	100	81.416	ENSXETG00000010179	ncbp1	100	81.416	Xenopus_tropicalis
ENSNLEG00000016909	NCBP1	99	82.642	ENSXMAG00000018253	NCBP1	99	82.264	Xiphophorus_maculatus