EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000017132 (Gene tree)
Gene ID: 100603398
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 31548 bases
Position: chr22a:13987773-14019320
Accession: 100603398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000020817	Beta-Casp	PF10996.8	1.3e-20	1	1
ENSNLEP00000020817	Lactamase_B	PF00753.27	2e-06	1	1
ENSNLEP00000020817	RMMBL	PF07521.12	1.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000059397	CPSF2-202	189	-	ENSNLEP00000043366	62 (aa)	-	A0A2I3HIS2
ENSNLET00000021859	CPSF2-201	2331	XM_012498144	ENSNLEP00000020817	776 (aa)	XP_012353598	G1S5M9

Gene Model

Click here to download ENSNLEG00000017132's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000017132's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000017132	CPSF2	100	99.105	ENSG00000165934	CPSF2	100	100.000	Homo_sapiens
ENSNLEG00000017132	CPSF2	100	85.044	ENSAPOG00000001242	cpsf2	100	85.044	Acanthochromis_polyacanthus
ENSNLEG00000017132	CPSF2	100	85.443	ENSACIG00000009331	cpsf2	100	85.443	Amphilophus_citrinellus
ENSNLEG00000017132	CPSF2	100	85.171	ENSAOCG00000014095	cpsf2	100	85.171	Amphiprion_ocellaris
ENSNLEG00000017132	CPSF2	100	85.171	ENSAPEG00000009158	cpsf2	100	85.171	Amphiprion_percula
ENSNLEG00000017132	CPSF2	96	85.395	ENSATEG00000017644	cpsf2	100	83.306	Anabas_testudineus
ENSNLEG00000017132	CPSF2	100	95.159	ENSAPLG00000006330	CPSF2	100	95.159	Anas_platyrhynchos
ENSNLEG00000017132	CPSF2	100	94.636	ENSACAG00000009245	CPSF2	100	94.636	Anolis_carolinensis
ENSNLEG00000017132	CPSF2	100	98.849	ENSANAG00000022915	CPSF2	100	98.849	Aotus_nancymaae
ENSNLEG00000017132	CPSF2	100	85.006	ENSAMXG00000018696	cpsf2	100	85.006	Astyanax_mexicanus
ENSNLEG00000017132	CPSF2	100	98.721	ENSBTAG00000010227	CPSF2	100	98.721	Bos_taurus
ENSNLEG00000017132	CPSF2	100	41.274	WBGene00017313	cpsf-2	100	40.732	Caenorhabditis_elegans
ENSNLEG00000017132	CPSF2	100	98.849	ENSCJAG00000018069	CPSF2	100	98.849	Callithrix_jacchus
ENSNLEG00000017132	CPSF2	100	98.721	ENSCAFG00000010909	CPSF2	100	98.721	Canis_familiaris
ENSNLEG00000017132	CPSF2	100	98.721	ENSCAFG00020020670	CPSF2	100	98.721	Canis_lupus_dingo
ENSNLEG00000017132	CPSF2	100	98.721	ENSCHIG00000023848	CPSF2	100	98.721	Capra_hircus
ENSNLEG00000017132	CPSF2	100	97.954	ENSTSYG00000009036	CPSF2	100	97.954	Carlito_syrichta
ENSNLEG00000017132	CPSF2	100	98.849	ENSCPOG00000010899	CPSF2	100	98.849	Cavia_porcellus
ENSNLEG00000017132	CPSF2	100	98.849	ENSCCAG00000028088	CPSF2	100	98.849	Cebus_capucinus
ENSNLEG00000017132	CPSF2	100	98.977	ENSCATG00000030132	CPSF2	100	98.977	Cercocebus_atys
ENSNLEG00000017132	CPSF2	100	98.721	ENSCLAG00000012404	CPSF2	100	98.721	Chinchilla_lanigera
ENSNLEG00000017132	CPSF2	100	98.977	ENSCSAG00000011300	CPSF2	100	98.977	Chlorocebus_sabaeus
ENSNLEG00000017132	CPSF2	100	91.944	ENSCHOG00000012904	CPSF2	100	91.944	Choloepus_hoffmanni
ENSNLEG00000017132	CPSF2	100	95.402	ENSCPBG00000008766	CPSF2	97	95.402	Chrysemys_picta_bellii
ENSNLEG00000017132	CPSF2	100	54.375	ENSCING00000007881	-	100	54.000	Ciona_intestinalis
ENSNLEG00000017132	CPSF2	94	98.907	ENSCANG00000041651	CPSF2	100	98.907	Colobus_angolensis_palliatus
ENSNLEG00000017132	CPSF2	100	97.826	ENSCGRG00001006901	Cpsf2	100	97.826	Cricetulus_griseus_chok1gshd
ENSNLEG00000017132	CPSF2	100	97.826	ENSCGRG00000012416	Cpsf2	100	97.826	Cricetulus_griseus_crigri
ENSNLEG00000017132	CPSF2	100	83.016	ENSCSEG00000004116	cpsf2	100	83.016	Cynoglossus_semilaevis
ENSNLEG00000017132	CPSF2	100	84.664	ENSCVAG00000000095	cpsf2	100	84.791	Cyprinodon_variegatus
ENSNLEG00000017132	CPSF2	100	85.063	ENSDARG00000028971	cpsf2	100	85.063	Danio_rerio
ENSNLEG00000017132	CPSF2	100	98.593	ENSDNOG00000042757	CPSF2	100	98.593	Dasypus_novemcinctus
ENSNLEG00000017132	CPSF2	100	98.465	ENSDORG00000013709	Cpsf2	100	98.465	Dipodomys_ordii
ENSNLEG00000017132	CPSF2	100	53.051	FBgn0027873	Cpsf100	100	52.809	Drosophila_melanogaster
ENSNLEG00000017132	CPSF2	100	89.655	ENSETEG00000012123	CPSF2	100	89.655	Echinops_telfairi
ENSNLEG00000017132	CPSF2	52	75.000	ENSEBUG00000012098	cpsf2	93	75.000	Eptatretus_burgeri
ENSNLEG00000017132	CPSF2	91	97.611	ENSEASG00005021193	CPSF2	100	97.611	Equus_asinus_asinus
ENSNLEG00000017132	CPSF2	100	98.593	ENSECAG00000023935	CPSF2	100	98.593	Equus_caballus
ENSNLEG00000017132	CPSF2	100	83.312	ENSELUG00000008442	cpsf2	100	83.312	Esox_lucius
ENSNLEG00000017132	CPSF2	100	98.593	ENSFCAG00000007886	CPSF2	100	98.593	Felis_catus
ENSNLEG00000017132	CPSF2	100	95.402	ENSFALG00000002412	CPSF2	100	95.402	Ficedula_albicollis
ENSNLEG00000017132	CPSF2	100	98.721	ENSFDAG00000006327	CPSF2	100	98.721	Fukomys_damarensis
ENSNLEG00000017132	CPSF2	96	84.052	ENSFHEG00000015465	cpsf2	98	84.575	Fundulus_heteroclitus
ENSNLEG00000017132	CPSF2	100	83.081	ENSGMOG00000008761	cpsf2	100	83.081	Gadus_morhua
ENSNLEG00000017132	CPSF2	100	94.636	ENSGALG00000010783	CPSF2	100	95.147	Gallus_gallus
ENSNLEG00000017132	CPSF2	100	84.918	ENSGAFG00000001407	cpsf2	100	84.918	Gambusia_affinis
ENSNLEG00000017132	CPSF2	100	83.777	ENSGACG00000008418	cpsf2	100	83.777	Gasterosteus_aculeatus
ENSNLEG00000017132	CPSF2	100	95.530	ENSGAGG00000008287	CPSF2	100	95.530	Gopherus_agassizii
ENSNLEG00000017132	CPSF2	100	99.105	ENSGGOG00000011799	CPSF2	100	99.105	Gorilla_gorilla
ENSNLEG00000017132	CPSF2	100	84.411	ENSHBUG00000023466	cpsf2	100	84.411	Haplochromis_burtoni
ENSNLEG00000017132	CPSF2	100	98.593	ENSHGLG00000018311	CPSF2	100	98.593	Heterocephalus_glaber_female
ENSNLEG00000017132	CPSF2	100	98.593	ENSHGLG00100016460	CPSF2	100	98.593	Heterocephalus_glaber_male
ENSNLEG00000017132	CPSF2	100	84.030	ENSHCOG00000019527	cpsf2	98	84.030	Hippocampus_comes
ENSNLEG00000017132	CPSF2	100	84.879	ENSIPUG00000020857	cpsf2	100	84.879	Ictalurus_punctatus
ENSNLEG00000017132	CPSF2	100	98.721	ENSSTOG00000009528	CPSF2	100	98.721	Ictidomys_tridecemlineatus
ENSNLEG00000017132	CPSF2	100	98.338	ENSJJAG00000017925	Cpsf2	100	98.338	Jaculus_jaculus
ENSNLEG00000017132	CPSF2	100	83.904	ENSKMAG00000019429	cpsf2	100	83.904	Kryptolebias_marmoratus
ENSNLEG00000017132	CPSF2	95	83.556	ENSLBEG00000011585	cpsf2	100	83.690	Labrus_bergylta
ENSNLEG00000017132	CPSF2	100	88.761	ENSLACG00000019024	CPSF2	100	89.017	Latimeria_chalumnae
ENSNLEG00000017132	CPSF2	100	86.946	ENSLOCG00000014102	cpsf2	100	86.946	Lepisosteus_oculatus
ENSNLEG00000017132	CPSF2	100	98.597	ENSLAFG00000004891	CPSF2	100	98.597	Loxodonta_africana
ENSNLEG00000017132	CPSF2	100	98.977	ENSMFAG00000041212	CPSF2	100	98.977	Macaca_fascicularis
ENSNLEG00000017132	CPSF2	100	98.977	ENSMMUG00000000699	CPSF2	100	98.977	Macaca_mulatta
ENSNLEG00000017132	CPSF2	100	98.977	ENSMNEG00000031584	CPSF2	100	98.977	Macaca_nemestrina
ENSNLEG00000017132	CPSF2	100	98.977	ENSMLEG00000029394	CPSF2	100	98.977	Mandrillus_leucophaeus
ENSNLEG00000017132	CPSF2	100	85.044	ENSMAMG00000004235	cpsf2	100	85.044	Mastacembelus_armatus
ENSNLEG00000017132	CPSF2	100	84.537	ENSMZEG00005001769	cpsf2	100	84.537	Maylandia_zebra
ENSNLEG00000017132	CPSF2	100	94.643	ENSMGAG00000013122	CPSF2	100	95.153	Meleagris_gallopavo
ENSNLEG00000017132	CPSF2	100	97.826	ENSMAUG00000015160	Cpsf2	100	97.826	Mesocricetus_auratus
ENSNLEG00000017132	CPSF2	100	98.849	ENSMICG00000016441	CPSF2	100	98.849	Microcebus_murinus
ENSNLEG00000017132	CPSF2	100	97.826	ENSMOCG00000015372	Cpsf2	100	97.826	Microtus_ochrogaster
ENSNLEG00000017132	CPSF2	100	80.228	ENSMMOG00000015590	cpsf2	100	80.228	Mola_mola
ENSNLEG00000017132	CPSF2	100	97.954	ENSMODG00000002042	CPSF2	100	97.954	Monodelphis_domestica
ENSNLEG00000017132	CPSF2	100	82.592	ENSMALG00000022275	cpsf2	100	82.592	Monopterus_albus
ENSNLEG00000017132	CPSF2	100	97.315	ENSMUSG00000041781	Cpsf2	100	97.315	Mus_musculus
ENSNLEG00000017132	CPSF2	100	97.570	MGP_PahariEiJ_G0029791	Cpsf2	100	97.570	Mus_pahari
ENSNLEG00000017132	CPSF2	100	97.315	MGP_SPRETEiJ_G0018877	Cpsf2	100	97.315	Mus_spretus
ENSNLEG00000017132	CPSF2	100	98.721	ENSMPUG00000007617	CPSF2	98	98.721	Mustela_putorius_furo
ENSNLEG00000017132	CPSF2	100	97.954	ENSMLUG00000005570	CPSF2	100	97.954	Myotis_lucifugus
ENSNLEG00000017132	CPSF2	100	98.082	ENSNGAG00000020312	Cpsf2	100	98.082	Nannospalax_galili
ENSNLEG00000017132	CPSF2	100	84.918	ENSNBRG00000022402	cpsf2	100	84.918	Neolamprologus_brichardi
ENSNLEG00000017132	CPSF2	91	99.676	ENSMEUG00000008138	CPSF2	91	99.676	Notamacropus_eugenii
ENSNLEG00000017132	CPSF2	94	90.710	ENSOPRG00000008484	-	100	90.710	Ochotona_princeps
ENSNLEG00000017132	CPSF2	100	98.465	ENSODEG00000008682	CPSF2	100	98.465	Octodon_degus
ENSNLEG00000017132	CPSF2	100	85.298	ENSONIG00000005901	cpsf2	100	85.298	Oreochromis_niloticus
ENSNLEG00000017132	CPSF2	100	97.570	ENSOANG00000003822	CPSF2	100	97.570	Ornithorhynchus_anatinus
ENSNLEG00000017132	CPSF2	100	98.338	ENSOCUG00000005713	CPSF2	100	98.338	Oryctolagus_cuniculus
ENSNLEG00000017132	CPSF2	100	79.341	ENSORLG00000011628	cpsf2	100	79.341	Oryzias_latipes
ENSNLEG00000017132	CPSF2	100	84.157	ENSORLG00020016980	cpsf2	100	84.157	Oryzias_latipes_hni
ENSNLEG00000017132	CPSF2	100	84.157	ENSORLG00015011910	cpsf2	100	84.157	Oryzias_latipes_hsok
ENSNLEG00000017132	CPSF2	100	83.777	ENSOMEG00000022876	cpsf2	100	83.777	Oryzias_melastigma
ENSNLEG00000017132	CPSF2	100	95.663	ENSOARG00000012889	CPSF2	100	95.663	Ovis_aries
ENSNLEG00000017132	CPSF2	100	99.105	ENSPPAG00000039666	CPSF2	100	99.105	Pan_paniscus
ENSNLEG00000017132	CPSF2	99	98.592	ENSPPRG00000010869	CPSF2	100	98.592	Panthera_pardus
ENSNLEG00000017132	CPSF2	100	98.593	ENSPTIG00000021202	CPSF2	100	98.593	Panthera_tigris_altaica
ENSNLEG00000017132	CPSF2	100	99.105	ENSPTRG00000006651	CPSF2	100	99.105	Pan_troglodytes
ENSNLEG00000017132	CPSF2	100	98.977	ENSPANG00000017417	CPSF2	100	98.977	Papio_anubis
ENSNLEG00000017132	CPSF2	100	81.321	ENSPKIG00000021453	cpsf2	100	81.321	Paramormyrops_kingsleyae
ENSNLEG00000017132	CPSF2	100	94.891	ENSPSIG00000006289	CPSF2	100	94.891	Pelodiscus_sinensis
ENSNLEG00000017132	CPSF2	76	78.904	ENSPMGG00000002511	cpsf2	100	79.070	Periophthalmus_magnuspinnatus
ENSNLEG00000017132	CPSF2	100	98.082	ENSPEMG00000007917	Cpsf2	100	98.082	Peromyscus_maniculatus_bairdii
ENSNLEG00000017132	CPSF2	100	73.451	ENSPMAG00000006205	cpsf2	100	73.451	Petromyzon_marinus
ENSNLEG00000017132	CPSF2	100	97.954	ENSPCIG00000011393	CPSF2	100	97.954	Phascolarctos_cinereus
ENSNLEG00000017132	CPSF2	100	84.791	ENSPFOG00000018648	cpsf2	100	84.791	Poecilia_formosa
ENSNLEG00000017132	CPSF2	100	84.791	ENSPLAG00000019199	cpsf2	99	84.791	Poecilia_latipinna
ENSNLEG00000017132	CPSF2	96	85.132	ENSPMEG00000012100	cpsf2	100	84.492	Poecilia_mexicana
ENSNLEG00000017132	CPSF2	100	84.664	ENSPREG00000008960	cpsf2	100	84.664	Poecilia_reticulata
ENSNLEG00000017132	CPSF2	63	98.589	ENSPPYG00000029685	-	100	98.589	Pongo_abelii
ENSNLEG00000017132	CPSF2	100	98.593	ENSPCAG00000012477	CPSF2	100	98.593	Procavia_capensis
ENSNLEG00000017132	CPSF2	100	98.849	ENSPCOG00000026387	CPSF2	100	98.849	Propithecus_coquereli
ENSNLEG00000017132	CPSF2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSNLEG00000017132	CPSF2	100	84.557	ENSPNYG00000023356	cpsf2	100	84.557	Pundamilia_nyererei
ENSNLEG00000017132	CPSF2	100	86.150	ENSPNAG00000001849	cpsf2	100	86.150	Pygocentrus_nattereri
ENSNLEG00000017132	CPSF2	100	97.698	ENSRNOG00000005733	Cpsf2	100	97.698	Rattus_norvegicus
ENSNLEG00000017132	CPSF2	100	98.977	ENSRBIG00000044792	CPSF2	100	98.977	Rhinopithecus_bieti
ENSNLEG00000017132	CPSF2	100	98.977	ENSRROG00000034875	CPSF2	100	98.977	Rhinopithecus_roxellana
ENSNLEG00000017132	CPSF2	100	98.849	ENSSBOG00000024571	CPSF2	100	98.849	Saimiri_boliviensis_boliviensis
ENSNLEG00000017132	CPSF2	100	98.082	ENSSHAG00000010458	CPSF2	100	98.082	Sarcophilus_harrisii
ENSNLEG00000017132	CPSF2	100	86.912	ENSSFOG00015002117	cpsf2	100	86.912	Scleropages_formosus
ENSNLEG00000017132	CPSF2	100	83.270	ENSSMAG00000002001	cpsf2	100	83.270	Scophthalmus_maximus
ENSNLEG00000017132	CPSF2	100	85.425	ENSSDUG00000004084	cpsf2	100	85.425	Seriola_dumerili
ENSNLEG00000017132	CPSF2	100	84.918	ENSSLDG00000024330	cpsf2	100	84.918	Seriola_lalandi_dorsalis
ENSNLEG00000017132	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSNLEG00000017132	CPSF2	100	94.891	ENSSPUG00000013485	CPSF2	100	94.891	Sphenodon_punctatus
ENSNLEG00000017132	CPSF2	100	84.411	ENSSPAG00000013284	cpsf2	100	84.411	Stegastes_partitus
ENSNLEG00000017132	CPSF2	100	98.593	ENSSSCG00000002447	CPSF2	100	98.593	Sus_scrofa
ENSNLEG00000017132	CPSF2	100	95.530	ENSTGUG00000012571	-	100	95.530	Taeniopygia_guttata
ENSNLEG00000017132	CPSF2	100	84.157	ENSTRUG00000003742	cpsf2	100	84.157	Takifugu_rubripes
ENSNLEG00000017132	CPSF2	100	82.933	ENSTNIG00000012228	cpsf2	100	83.692	Tetraodon_nigroviridis
ENSNLEG00000017132	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSNLEG00000017132	CPSF2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSNLEG00000017132	CPSF2	100	98.849	ENSUAMG00000028071	CPSF2	100	98.849	Ursus_americanus
ENSNLEG00000017132	CPSF2	100	98.849	ENSUMAG00000005029	CPSF2	100	98.849	Ursus_maritimus
ENSNLEG00000017132	CPSF2	99	98.720	ENSVPAG00000003503	CPSF2	100	98.720	Vicugna_pacos
ENSNLEG00000017132	CPSF2	100	98.721	ENSVVUG00000024642	CPSF2	100	98.721	Vulpes_vulpes
ENSNLEG00000017132	CPSF2	100	91.188	ENSXETG00000010289	cpsf2	100	91.188	Xenopus_tropicalis
ENSNLEG00000017132	CPSF2	100	85.298	ENSXCOG00000001764	cpsf2	100	85.298	Xiphophorus_couchianus
ENSNLEG00000017132	CPSF2	100	85.298	ENSXMAG00000017048	cpsf2	100	85.298	Xiphophorus_maculatus