EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000017151 (Gene tree)
Gene ID: 100586006
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 15354 bases
Position: chr20:47202082-47217435
Accession: 100586006
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000044136	RRM_1	PF00076.22	1.3e-38	1	3
ENSNLEP00000044136	RRM_1	PF00076.22	1.3e-38	2	3
ENSNLEP00000044136	RRM_1	PF00076.22	1.3e-38	3	3
ENSNLEP00000020835	RRM_1	PF00076.22	4.1e-38	1	3
ENSNLEP00000020835	RRM_1	PF00076.22	4.1e-38	2	3
ENSNLEP00000020835	RRM_1	PF00076.22	4.1e-38	3	3
ENSNLEP00000036638	RRM_1	PF00076.22	6.3e-38	1	3
ENSNLEP00000036638	RRM_1	PF00076.22	6.3e-38	2	3
ENSNLEP00000036638	RRM_1	PF00076.22	6.3e-38	3	3
ENSNLEP00000031478	RRM_1	PF00076.22	6.4e-38	1	3
ENSNLEP00000031478	RRM_1	PF00076.22	6.4e-38	2	3
ENSNLEP00000031478	RRM_1	PF00076.22	6.4e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000047019	RBM47-203	1764	-	ENSNLEP00000036638	587 (aa)	-	A0A2I3GZ37
ENSNLET00000055278	RBM47-201	4430	XM_003258613	ENSNLEP00000031478	593 (aa)	XP_003258661	A0A2I3GJI6
ENSNLET00000021878	RBM47-202	3734	XM_003258612	ENSNLEP00000020835	524 (aa)	XP_003258660	G1S5P7
ENSNLET00000047965	RBM47-204	1182	-	ENSNLEP00000044136	393 (aa)	-	A0A2I3HL07

Gene Model

Click here to download ENSNLEG00000017151's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000017151's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000017151	RBM47	60	39.316	ENSNLEG00000034318	DND1	65	39.316
ENSNLEG00000017151	RBM47	76	74.000	ENSNLEG00000006184	RBM46	64	74.000
ENSNLEG00000017151	RBM47	81	55.108	ENSNLEG00000008411	HNRNPR	72	47.936
ENSNLEG00000017151	RBM47	87	68.588	ENSNLEG00000012028	A1CF	74	58.628
ENSNLEG00000017151	RBM47	77	55.049	ENSNLEG00000012879	-	73	57.692
ENSNLEG00000017151	RBM47	67	49.248	ENSNLEG00000031273	-	70	50.595

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000017151	RBM47	100	99.494	ENSG00000163694	RBM47	100	100.000	Homo_sapiens
ENSNLEG00000017151	RBM47	100	84.309	ENSAPOG00000011062	rbm47	100	81.383	Acanthochromis_polyacanthus
ENSNLEG00000017151	RBM47	100	98.133	ENSAMEG00000009672	RBM47	100	96.477	Ailuropoda_melanoleuca
ENSNLEG00000017151	RBM47	100	84.840	ENSACIG00000011531	rbm47	100	81.915	Amphilophus_citrinellus
ENSNLEG00000017151	RBM47	100	84.309	ENSAOCG00000022245	rbm47	100	81.383	Amphiprion_ocellaris
ENSNLEG00000017151	RBM47	100	81.633	ENSAPEG00000018304	rbm47	100	81.383	Amphiprion_percula
ENSNLEG00000017151	RBM47	100	82.564	ENSATEG00000018400	rbm47	94	85.028	Anabas_testudineus
ENSNLEG00000017151	RBM47	100	88.255	ENSAPLG00000013974	RBM47	100	87.248	Anas_platyrhynchos
ENSNLEG00000017151	RBM47	100	87.533	ENSACAG00000011833	RBM47	100	85.500	Anolis_carolinensis
ENSNLEG00000017151	RBM47	100	98.473	ENSANAG00000029440	RBM47	100	98.473	Aotus_nancymaae
ENSNLEG00000017151	RBM47	100	82.687	ENSACLG00000016902	rbm47	95	85.311	Astatotilapia_calliptera
ENSNLEG00000017151	RBM47	100	75.947	ENSAMXG00000021794	rbm47	95	84.078	Astyanax_mexicanus
ENSNLEG00000017151	RBM47	100	96.785	ENSBTAG00000002356	RBM47	100	96.785	Bos_taurus
ENSNLEG00000017151	RBM47	100	98.286	ENSCJAG00000019385	RBM47	100	98.663	Callithrix_jacchus
ENSNLEG00000017151	RBM47	96	92.832	ENSCAFG00000015898	RBM47	100	93.121	Canis_familiaris
ENSNLEG00000017151	RBM47	90	94.618	ENSCAFG00020010558	RBM47	94	94.695	Canis_lupus_dingo
ENSNLEG00000017151	RBM47	100	97.124	ENSCHIG00000026214	RBM47	100	97.124	Capra_hircus
ENSNLEG00000017151	RBM47	86	80.157	ENSTSYG00000033612	RBM47	93	89.823	Carlito_syrichta
ENSNLEG00000017151	RBM47	100	87.395	ENSCAPG00000008426	RBM47	100	87.395	Cavia_aperea
ENSNLEG00000017151	RBM47	100	97.067	ENSCPOG00000014100	RBM47	100	93.950	Cavia_porcellus
ENSNLEG00000017151	RBM47	100	98.286	ENSCCAG00000030129	-	100	98.663	Cebus_capucinus
ENSNLEG00000017151	RBM47	99	68.644	ENSCCAG00000024397	-	99	67.119	Cebus_capucinus
ENSNLEG00000017151	RBM47	100	99.663	ENSCATG00000042064	RBM47	100	99.663	Cercocebus_atys
ENSNLEG00000017151	RBM47	100	96.533	ENSCLAG00000001684	RBM47	100	95.570	Chinchilla_lanigera
ENSNLEG00000017151	RBM47	100	99.663	ENSCSAG00000017060	RBM47	100	99.663	Chlorocebus_sabaeus
ENSNLEG00000017151	RBM47	87	97.965	ENSCHOG00000011731	RBM47	88	91.139	Choloepus_hoffmanni
ENSNLEG00000017151	RBM47	100	93.085	ENSCPBG00000013831	RBM47	100	89.933	Chrysemys_picta_bellii
ENSNLEG00000017151	RBM47	100	99.494	ENSCANG00000019997	RBM47	100	99.494	Colobus_angolensis_palliatus
ENSNLEG00000017151	RBM47	100	94.444	ENSCGRG00001000623	-	100	92.617	Cricetulus_griseus_chok1gshd
ENSNLEG00000017151	RBM47	100	87.500	ENSCGRG00001020102	-	100	87.121	Cricetulus_griseus_chok1gshd
ENSNLEG00000017151	RBM47	100	93.915	ENSCGRG00000007762	-	100	94.937	Cricetulus_griseus_crigri
ENSNLEG00000017151	RBM47	100	87.121	ENSCGRG00000014760	-	100	86.742	Cricetulus_griseus_crigri
ENSNLEG00000017151	RBM47	95	83.069	ENSCSEG00000004545	rbm47	100	73.401	Cynoglossus_semilaevis
ENSNLEG00000017151	RBM47	98	83.880	ENSCVAG00000020144	rbm47	100	81.117	Cyprinodon_variegatus
ENSNLEG00000017151	RBM47	96	81.378	ENSDARG00000061985	rbm47	95	83.978	Danio_rerio
ENSNLEG00000017151	RBM47	100	93.209	ENSDNOG00000046854	RBM47	100	94.567	Dasypus_novemcinctus
ENSNLEG00000017151	RBM47	100	93.813	ENSDORG00000010144	Rbm47	100	93.645	Dipodomys_ordii
ENSNLEG00000017151	RBM47	100	93.144	ENSETEG00000009194	RBM47	100	93.311	Echinops_telfairi
ENSNLEG00000017151	RBM47	95	70.667	ENSEBUG00000011912	rbm47	95	75.145	Eptatretus_burgeri
ENSNLEG00000017151	RBM47	100	97.124	ENSEASG00005008443	RBM47	100	97.124	Equus_asinus_asinus
ENSNLEG00000017151	RBM47	100	97.124	ENSECAG00000004400	RBM47	100	97.124	Equus_caballus
ENSNLEG00000017151	RBM47	76	96.537	ENSEEUG00000001194	RBM47	75	96.537	Erinaceus_europaeus
ENSNLEG00000017151	RBM47	99	82.759	ENSELUG00000006148	rbm47	93	85.237	Esox_lucius
ENSNLEG00000017151	RBM47	100	96.944	ENSFCAG00000012399	RBM47	100	96.944	Felis_catus
ENSNLEG00000017151	RBM47	100	90.691	ENSFALG00000002861	RBM47	100	90.285	Ficedula_albicollis
ENSNLEG00000017151	RBM47	100	94.400	ENSFDAG00000016326	RBM47	100	93.220	Fukomys_damarensis
ENSNLEG00000017151	RBM47	96	87.042	ENSFHEG00000007938	rbm47	100	74.662	Fundulus_heteroclitus
ENSNLEG00000017151	RBM47	100	81.013	ENSGMOG00000014802	rbm47	94	84.358	Gadus_morhua
ENSNLEG00000017151	RBM47	95	90.691	ENSGALG00000014267	RBM47	100	92.042	Gallus_gallus
ENSNLEG00000017151	RBM47	96	82.632	ENSGAFG00000020571	rbm47	99	79.630	Gambusia_affinis
ENSNLEG00000017151	RBM47	100	80.000	ENSGACG00000016223	rbm47	94	83.427	Gasterosteus_aculeatus
ENSNLEG00000017151	RBM47	100	90.436	ENSGAGG00000020051	RBM47	100	90.101	Gopherus_agassizii
ENSNLEG00000017151	RBM47	100	99.663	ENSGGOG00000001367	RBM47	100	99.663	Gorilla_gorilla
ENSNLEG00000017151	RBM47	100	82.687	ENSHBUG00000003520	rbm47	95	85.311	Haplochromis_burtoni
ENSNLEG00000017151	RBM47	100	74.476	ENSHGLG00000016914	RBM47	100	96.203	Heterocephalus_glaber_female
ENSNLEG00000017151	RBM47	100	94.241	ENSHGLG00100014028	-	100	96.203	Heterocephalus_glaber_male
ENSNLEG00000017151	RBM47	95	90.133	ENSHGLG00100003071	-	100	83.559	Heterocephalus_glaber_male
ENSNLEG00000017151	RBM47	95	84.309	ENSHCOG00000002074	rbm47	99	81.746	Hippocampus_comes
ENSNLEG00000017151	RBM47	100	80.829	ENSIPUG00000004743	rbm47	97	84.659	Ictalurus_punctatus
ENSNLEG00000017151	RBM47	100	96.578	ENSSTOG00000004727	RBM47	100	96.578	Ictidomys_tridecemlineatus
ENSNLEG00000017151	RBM47	100	94.430	ENSJJAG00000013823	Rbm47	100	94.463	Jaculus_jaculus
ENSNLEG00000017151	RBM47	100	84.433	ENSKMAG00000000084	rbm47	100	81.316	Kryptolebias_marmoratus
ENSNLEG00000017151	RBM47	100	82.713	ENSLBEG00000008436	rbm47	100	80.585	Labrus_bergylta
ENSNLEG00000017151	RBM47	100	88.298	ENSLACG00000007196	RBM47	100	85.135	Latimeria_chalumnae
ENSNLEG00000017151	RBM47	100	87.433	ENSLOCG00000012966	rbm47	95	81.218	Lepisosteus_oculatus
ENSNLEG00000017151	RBM47	100	96.800	ENSLAFG00000011998	RBM47	100	94.286	Loxodonta_africana
ENSNLEG00000017151	RBM47	100	99.663	ENSMFAG00000037967	RBM47	100	99.663	Macaca_fascicularis
ENSNLEG00000017151	RBM47	100	99.663	ENSMMUG00000012036	RBM47	100	100.000	Macaca_mulatta
ENSNLEG00000017151	RBM47	100	99.494	ENSMNEG00000040774	RBM47	100	99.494	Macaca_nemestrina
ENSNLEG00000017151	RBM47	100	100.000	ENSMLEG00000041432	RBM47	100	100.000	Mandrillus_leucophaeus
ENSNLEG00000017151	RBM47	100	83.033	ENSMAMG00000019143	rbm47	95	85.028	Mastacembelus_armatus
ENSNLEG00000017151	RBM47	100	82.687	ENSMZEG00005023659	rbm47	95	85.311	Maylandia_zebra
ENSNLEG00000017151	RBM47	100	92.819	ENSMGAG00000012226	RBM47	100	90.000	Meleagris_gallopavo
ENSNLEG00000017151	RBM47	100	93.121	ENSMAUG00000006493	Rbm47	100	94.937	Mesocricetus_auratus
ENSNLEG00000017151	RBM47	100	90.119	ENSMICG00000026417	RBM47	100	91.823	Microcebus_murinus
ENSNLEG00000017151	RBM47	100	93.445	ENSMOCG00000021170	Rbm47	100	95.570	Microtus_ochrogaster
ENSNLEG00000017151	RBM47	100	81.395	ENSMMOG00000007260	rbm47	95	83.989	Mola_mola
ENSNLEG00000017151	RBM47	100	81.980	ENSMODG00000020561	-	100	81.090	Monodelphis_domestica
ENSNLEG00000017151	RBM47	79	81.073	ENSMODG00000015426	-	97	80.064	Monodelphis_domestica
ENSNLEG00000017151	RBM47	100	92.800	ENSMODG00000007003	RBM47	100	90.909	Monodelphis_domestica
ENSNLEG00000017151	RBM47	100	83.245	ENSMALG00000005167	rbm47	100	81.383	Monopterus_albus
ENSNLEG00000017151	RBM47	100	93.109	MGP_CAROLIEiJ_G0027258	Rbm47	100	93.671	Mus_caroli
ENSNLEG00000017151	RBM47	100	93.445	ENSMUSG00000070780	Rbm47	100	93.671	Mus_musculus
ENSNLEG00000017151	RBM47	100	93.445	MGP_PahariEiJ_G0017040	Rbm47	100	94.304	Mus_pahari
ENSNLEG00000017151	RBM47	100	93.390	MGP_SPRETEiJ_G0028253	Rbm47	100	93.671	Mus_spretus
ENSNLEG00000017151	RBM47	100	98.400	ENSMPUG00000006177	RBM47	94	97.138	Mustela_putorius_furo
ENSNLEG00000017151	RBM47	100	93.401	ENSMLUG00000000889	RBM47	100	92.724	Myotis_lucifugus
ENSNLEG00000017151	RBM47	100	95.479	ENSNGAG00000003325	Rbm47	100	93.950	Nannospalax_galili
ENSNLEG00000017151	RBM47	100	82.946	ENSNBRG00000015092	rbm47	95	85.112	Neolamprologus_brichardi
ENSNLEG00000017151	RBM47	91	93.855	ENSMEUG00000009516	-	99	87.264	Notamacropus_eugenii
ENSNLEG00000017151	RBM47	85	97.083	ENSOPRG00000016507	-	75	97.083	Ochotona_princeps
ENSNLEG00000017151	RBM47	100	96.800	ENSODEG00000004873	RBM47	100	94.755	Octodon_degus
ENSNLEG00000017151	RBM47	100	81.795	ENSONIG00000009061	rbm47	94	84.551	Oreochromis_niloticus
ENSNLEG00000017151	RBM47	100	86.723	ENSOANG00000008978	RBM47	100	87.731	Ornithorhynchus_anatinus
ENSNLEG00000017151	RBM47	100	96.011	ENSOCUG00000012034	RBM47	100	95.093	Oryctolagus_cuniculus
ENSNLEG00000017151	RBM47	100	84.840	ENSORLG00000005847	rbm47	100	80.902	Oryzias_latipes
ENSNLEG00000017151	RBM47	100	84.840	ENSORLG00020005154	rbm47	100	80.902	Oryzias_latipes_hni
ENSNLEG00000017151	RBM47	100	85.106	ENSORLG00015000066	rbm47	100	81.167	Oryzias_latipes_hsok
ENSNLEG00000017151	RBM47	100	84.840	ENSOMEG00000010730	rbm47	100	81.117	Oryzias_melastigma
ENSNLEG00000017151	RBM47	100	89.867	ENSOGAG00000025193	-	100	87.436	Otolemur_garnettii
ENSNLEG00000017151	RBM47	100	97.138	ENSOGAG00000029367	-	100	97.138	Otolemur_garnettii
ENSNLEG00000017151	RBM47	100	92.105	ENSOARG00000012711	RBM47	100	87.437	Ovis_aries
ENSNLEG00000017151	RBM47	100	99.494	ENSPPAG00000029763	RBM47	100	99.494	Pan_paniscus
ENSNLEG00000017151	RBM47	100	93.888	ENSPPRG00000012873	RBM47	100	93.888	Panthera_pardus
ENSNLEG00000017151	RBM47	85	91.784	ENSPTIG00000017046	RBM47	100	90.381	Panthera_tigris_altaica
ENSNLEG00000017151	RBM47	100	99.663	ENSPTRG00000016006	RBM47	100	99.663	Pan_troglodytes
ENSNLEG00000017151	RBM47	100	99.663	ENSPANG00000005980	RBM47	100	99.663	Papio_anubis
ENSNLEG00000017151	RBM47	95	83.690	ENSPKIG00000013431	RBM47	92	86.119	Paramormyrops_kingsleyae
ENSNLEG00000017151	RBM47	90	85.836	ENSPKIG00000005037	rbm47	95	84.225	Paramormyrops_kingsleyae
ENSNLEG00000017151	RBM47	95	92.819	ENSPSIG00000017516	RBM47	97	90.720	Pelodiscus_sinensis
ENSNLEG00000017151	RBM47	95	83.422	ENSPMGG00000018540	rbm47	100	75.000	Periophthalmus_magnuspinnatus
ENSNLEG00000017151	RBM47	100	93.782	ENSPEMG00000011088	Rbm47	100	94.118	Peromyscus_maniculatus_bairdii
ENSNLEG00000017151	RBM47	91	86.313	ENSPFOG00000007997	rbm47	94	82.778	Poecilia_formosa
ENSNLEG00000017151	RBM47	95	83.511	ENSPLAG00000002072	rbm47	100	80.481	Poecilia_latipinna
ENSNLEG00000017151	RBM47	100	83.777	ENSPMEG00000017492	rbm47	100	80.319	Poecilia_mexicana
ENSNLEG00000017151	RBM47	96	87.042	ENSPREG00000008456	rbm47	100	80.749	Poecilia_reticulata
ENSNLEG00000017151	RBM47	98	85.932	ENSPPYG00000014688	RBM47	98	84.682	Pongo_abelii
ENSNLEG00000017151	RBM47	96	97.354	ENSPCAG00000011879	RBM47	81	97.500	Procavia_capensis
ENSNLEG00000017151	RBM47	100	92.699	ENSPCOG00000023451	RBM47	100	93.379	Propithecus_coquereli
ENSNLEG00000017151	RBM47	100	95.470	ENSPVAG00000003812	RBM47	100	95.470	Pteropus_vampyrus
ENSNLEG00000017151	RBM47	100	82.687	ENSPNYG00000022868	rbm47	95	84.831	Pundamilia_nyererei
ENSNLEG00000017151	RBM47	100	76.442	ENSPNAG00000007940	rbm47	95	84.637	Pygocentrus_nattereri
ENSNLEG00000017151	RBM47	100	93.445	ENSRNOG00000002408	Rbm47	100	93.445	Rattus_norvegicus
ENSNLEG00000017151	RBM47	100	99.494	ENSRBIG00000039601	RBM47	100	99.494	Rhinopithecus_bieti
ENSNLEG00000017151	RBM47	100	99.494	ENSRROG00000044696	RBM47	100	99.494	Rhinopithecus_roxellana
ENSNLEG00000017151	RBM47	100	96.438	ENSSBOG00000028475	RBM47	100	98.551	Saimiri_boliviensis_boliviensis
ENSNLEG00000017151	RBM47	100	93.067	ENSSHAG00000017576	RBM47	100	91.525	Sarcophilus_harrisii
ENSNLEG00000017151	RBM47	95	80.481	ENSSFOG00015024101	RBM47	97	76.091	Scleropages_formosus
ENSNLEG00000017151	RBM47	96	81.026	ENSSFOG00015012445	rbm47	94	80.800	Scleropages_formosus
ENSNLEG00000017151	RBM47	100	80.769	ENSSMAG00000009744	rbm47	94	82.486	Scophthalmus_maximus
ENSNLEG00000017151	RBM47	100	84.574	ENSSDUG00000022684	rbm47	100	81.649	Seriola_dumerili
ENSNLEG00000017151	RBM47	100	84.840	ENSSLDG00000003109	rbm47	100	81.383	Seriola_lalandi_dorsalis
ENSNLEG00000017151	RBM47	95	95.251	ENSSARG00000001735	RBM47	75	95.759	Sorex_araneus
ENSNLEG00000017151	RBM47	100	88.156	ENSSPUG00000007515	RBM47	100	91.176	Sphenodon_punctatus
ENSNLEG00000017151	RBM47	100	85.372	ENSSPAG00000001257	rbm47	100	82.181	Stegastes_partitus
ENSNLEG00000017151	RBM47	100	96.616	ENSSSCG00000008796	RBM47	100	96.616	Sus_scrofa
ENSNLEG00000017151	RBM47	100	89.280	ENSTGUG00000008705	RBM47	100	89.782	Taeniopygia_guttata
ENSNLEG00000017151	RBM47	95	83.690	ENSTRUG00000014050	rbm47	98	84.746	Takifugu_rubripes
ENSNLEG00000017151	RBM47	100	81.654	ENSTNIG00000006127	rbm47	95	84.551	Tetraodon_nigroviridis
ENSNLEG00000017151	RBM47	95	90.909	ENSTBEG00000001607	RBM47	76	90.909	Tupaia_belangeri
ENSNLEG00000017151	RBM47	100	96.604	ENSTTRG00000002839	RBM47	100	96.604	Tursiops_truncatus
ENSNLEG00000017151	RBM47	100	96.633	ENSUAMG00000021346	RBM47	100	96.633	Ursus_americanus
ENSNLEG00000017151	RBM47	57	98.630	ENSVPAG00000000641	-	57	98.630	Vicugna_pacos
ENSNLEG00000017151	RBM47	96	94.542	ENSVVUG00000014774	RBM47	100	93.750	Vulpes_vulpes
ENSNLEG00000017151	RBM47	100	87.566	ENSXETG00000012802	rbm47	100	84.486	Xenopus_tropicalis
ENSNLEG00000017151	RBM47	95	83.245	ENSXCOG00000000780	rbm47	100	80.481	Xiphophorus_couchianus
ENSNLEG00000017151	RBM47	100	83.245	ENSXMAG00000009874	rbm47	100	80.053	Xiphophorus_maculatus