EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000017570 (Gene tree)
Gene ID: 100593361
Gene Symbol: -
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 22353 bases
Position: chr11:56823115-56845467
Accession: 100593361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000021324	MMR_HSR1	PF01926.23	0.0002	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000022407	-	3361	XM_003252835	ENSNLEP00000021324	215 (aa)	XP_003252883	G1S735
ENSNLET00000053960	-	687	-	ENSNLEP00000046250	228 (aa)	-	A0A2I3HRV9
ENSNLET00000057362	-	3238	XM_003252836	ENSNLEP00000030133	174 (aa)	XP_003252884	A0A2I3GFR2
ENSNLET00000046297	-	222	-	ENSNLEP00000028827	73 (aa)	-	A0A2I3GC06

Gene Model

Click here to download ENSNLEG00000017570's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle04014	Ras signaling pathway	KEGG
nle04144	Endocytosis	KEGG
nle04145	Phagosome	KEGG
nle04962	Vasopressin-regulated water reabsorption	KEGG
nle05146	Amoebiasis	KEGG
nle05152	Tuberculosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000017570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000017570	-	91	40.686	ENSNLEG00000012853	-	87	48.889
ENSNLEG00000017570	-	78	42.442	ENSNLEG00000029309	RAB7A	83	42.442
ENSNLEG00000017570	-	75	45.963	ENSNLEG00000012323	RAB25	76	45.963
ENSNLEG00000017570	-	78	35.882	ENSNLEG00000014505	RAB39B	80	35.882
ENSNLEG00000017570	-	82	33.333	ENSNLEG00000004500	RHEB	93	33.333
ENSNLEG00000017570	-	93	35.294	ENSNLEG00000036073	RAB9A	99	35.294
ENSNLEG00000017570	-	100	82.326	ENSNLEG00000003434	RAB5A	100	82.326
ENSNLEG00000017570	-	73	35.625	ENSNLEG00000028438	RAB36	50	35.625
ENSNLEG00000017570	-	83	30.556	ENSNLEG00000034325	NRAS	94	30.556
ENSNLEG00000017570	-	55	30.159	ENSNLEG00000016295	-	60	30.159
ENSNLEG00000017570	-	83	39.130	ENSNLEG00000032616	RAB33B	79	39.344
ENSNLEG00000017570	-	90	35.323	ENSNLEG00000018324	RAB9B	97	35.323
ENSNLEG00000017570	-	85	34.783	ENSNLEG00000006939	RAB12	75	34.783
ENSNLEG00000017570	-	77	45.181	ENSNLEG00000017098	RAB6A	80	45.181
ENSNLEG00000017570	-	68	32.432	ENSNLEG00000029492	RERG	75	32.432
ENSNLEG00000017570	-	62	30.986	ENSNLEG00000034641	ARL8B	73	30.986
ENSNLEG00000017570	-	70	46.358	ENSNLEG00000003675	RAB6B	73	46.358
ENSNLEG00000017570	-	75	44.720	ENSNLEG00000017108	RAB14	75	44.720
ENSNLEG00000017570	-	83	37.705	ENSNLEG00000034919	RAB33A	77	37.705
ENSNLEG00000017570	-	86	41.304	ENSNLEG00000014534	RAB2B	88	41.304
ENSNLEG00000017570	-	82	32.787	ENSNLEG00000008300	HRAS	96	32.787
ENSNLEG00000017570	-	89	36.979	ENSNLEG00000028944	-	95	36.979
ENSNLEG00000017570	-	71	35.948	ENSNLEG00000030435	-	65	35.948
ENSNLEG00000017570	-	91	43.689	ENSNLEG00000001733	RAB11B	98	42.927
ENSNLEG00000017570	-	75	43.478	ENSNLEG00000036148	RAB2A	76	43.478
ENSNLEG00000017570	-	76	32.727	ENSNLEG00000027684	KRAS	90	31.579
ENSNLEG00000017570	-	78	42.857	ENSNLEG00000029364	RAB30	83	42.857
ENSNLEG00000017570	-	82	45.198	ENSNLEG00000006058	RAB1B	87	45.198
ENSNLEG00000017570	-	74	38.125	ENSNLEG00000027830	RAB23	67	38.125
ENSNLEG00000017570	-	80	42.222	ENSNLEG00000016970	RAB18	93	39.691

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000017570	-	100	100.000	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSNLEG00000017570	-	100	98.618	ENSAMEG00000003196	RAB5B	100	98.618	Ailuropoda_melanoleuca
ENSNLEG00000017570	-	100	96.279	ENSACAG00000005380	RAB5B	100	96.279	Anolis_carolinensis
ENSNLEG00000017570	-	100	100.000	ENSANAG00000033215	RAB5B	95	100.000	Aotus_nancymaae
ENSNLEG00000017570	-	100	99.535	ENSBTAG00000014129	RAB5B	100	99.535	Bos_taurus
ENSNLEG00000017570	-	100	100.000	ENSCJAG00000041780	RAB5B	95	100.000	Callithrix_jacchus
ENSNLEG00000017570	-	100	100.000	ENSCAFG00000000087	RAB5B	100	100.000	Canis_familiaris
ENSNLEG00000017570	-	100	100.000	ENSCAFG00020026094	RAB5B	100	100.000	Canis_lupus_dingo
ENSNLEG00000017570	-	97	100.000	ENSCHIG00000010333	RAB5B	96	100.000	Capra_hircus
ENSNLEG00000017570	-	100	99.535	ENSTSYG00000009576	RAB5B	100	99.535	Carlito_syrichta
ENSNLEG00000017570	-	100	100.000	ENSCPOG00000034818	RAB5B	100	100.000	Cavia_porcellus
ENSNLEG00000017570	-	100	99.070	ENSCCAG00000019480	RAB5B	100	99.070	Cebus_capucinus
ENSNLEG00000017570	-	83	99.441	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
ENSNLEG00000017570	-	100	99.070	ENSCSAG00000005277	RAB5B	100	99.070	Chlorocebus_sabaeus
ENSNLEG00000017570	-	100	96.279	ENSCPBG00000012712	RAB5B	100	96.279	Chrysemys_picta_bellii
ENSNLEG00000017570	-	100	99.535	ENSCGRG00001000428	Rab5b	100	99.535	Cricetulus_griseus_chok1gshd
ENSNLEG00000017570	-	100	99.535	ENSCGRG00000009508	-	100	99.535	Cricetulus_griseus_crigri
ENSNLEG00000017570	-	100	100.000	ENSDORG00000025063	Rab5b	100	100.000	Dipodomys_ordii
ENSNLEG00000017570	-	100	99.535	ENSECAG00000023306	RAB5B	100	99.535	Equus_caballus
ENSNLEG00000017570	-	100	99.070	ENSEEUG00000006745	RAB5B	100	99.070	Erinaceus_europaeus
ENSNLEG00000017570	-	100	100.000	ENSFDAG00000008326	RAB5B	100	100.000	Fukomys_damarensis
ENSNLEG00000017570	-	100	99.070	ENSHGLG00000005995	RAB5B	100	99.070	Heterocephalus_glaber_female
ENSNLEG00000017570	-	100	99.070	ENSHGLG00100012955	RAB5B	100	99.070	Heterocephalus_glaber_male
ENSNLEG00000017570	-	100	98.605	ENSSTOG00000010536	RAB5B	100	98.605	Ictidomys_tridecemlineatus
ENSNLEG00000017570	-	100	99.535	ENSJJAG00000019506	Rab5b	100	99.535	Jaculus_jaculus
ENSNLEG00000017570	-	100	99.078	ENSLAFG00000018009	RAB5B	95	99.078	Loxodonta_africana
ENSNLEG00000017570	-	100	99.070	ENSMFAG00000029992	RAB5B	100	99.070	Macaca_fascicularis
ENSNLEG00000017570	-	100	99.070	ENSMMUG00000031853	RAB5B	100	99.070	Macaca_mulatta
ENSNLEG00000017570	-	100	99.070	ENSMNEG00000005338	RAB5B	100	99.070	Macaca_nemestrina
ENSNLEG00000017570	-	100	99.070	ENSMLEG00000034462	RAB5B	100	99.070	Mandrillus_leucophaeus
ENSNLEG00000017570	-	100	100.000	ENSMAUG00000011613	Rab5b	100	100.000	Mesocricetus_auratus
ENSNLEG00000017570	-	100	99.535	ENSMICG00000011086	RAB5B	100	99.535	Microcebus_murinus
ENSNLEG00000017570	-	100	100.000	ENSMUSG00000000711	Rab5b	100	100.000	Mus_musculus
ENSNLEG00000017570	-	100	100.000	MGP_PahariEiJ_G0031135	Rab5b	100	100.000	Mus_pahari
ENSNLEG00000017570	-	100	99.535	MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	Mus_spretus
ENSNLEG00000017570	-	99	98.611	ENSMPUG00000000946	RAB5B	89	98.611	Mustela_putorius_furo
ENSNLEG00000017570	-	100	100.000	ENSOPRG00000007883	RAB5B	100	100.000	Ochotona_princeps
ENSNLEG00000017570	-	100	99.535	ENSODEG00000003860	RAB5B	100	99.535	Octodon_degus
ENSNLEG00000017570	-	100	100.000	ENSOCUG00000013895	RAB5B	95	100.000	Oryctolagus_cuniculus
ENSNLEG00000017570	-	100	100.000	ENSOARG00000010651	RAB5B	95	100.000	Ovis_aries
ENSNLEG00000017570	-	100	100.000	ENSPPAG00000035431	RAB5B	100	100.000	Pan_paniscus
ENSNLEG00000017570	-	100	100.000	ENSPTRG00000005071	RAB5B	97	99.522	Pan_troglodytes
ENSNLEG00000017570	-	99	98.131	ENSPANG00000021075	RAB5B	97	98.131	Papio_anubis
ENSNLEG00000017570	-	100	100.000	ENSPCOG00000016461	RAB5B	100	100.000	Propithecus_coquereli
ENSNLEG00000017570	-	100	99.070	ENSRNOG00000006130	Rab5b	100	99.070	Rattus_norvegicus
ENSNLEG00000017570	-	100	99.070	ENSRBIG00000013165	RAB5B	100	99.070	Rhinopithecus_bieti
ENSNLEG00000017570	-	100	99.070	ENSRROG00000037973	RAB5B	100	99.070	Rhinopithecus_roxellana
ENSNLEG00000017570	-	100	83.256	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
ENSNLEG00000017570	-	100	98.605	ENSSHAG00000007727	RAB5B	100	98.605	Sarcophilus_harrisii
ENSNLEG00000017570	-	100	100.000	ENSSARG00000006237	RAB5B	100	100.000	Sorex_araneus
ENSNLEG00000017570	-	100	96.279	ENSSPUG00000014873	RAB5B	100	96.279	Sphenodon_punctatus
ENSNLEG00000017570	-	100	100.000	ENSTTRG00000015001	RAB5B	100	100.000	Tursiops_truncatus
ENSNLEG00000017570	-	100	99.535	ENSUAMG00000014651	RAB5B	100	99.535	Ursus_americanus
ENSNLEG00000017570	-	100	99.535	ENSUMAG00000016263	RAB5B	100	99.535	Ursus_maritimus
ENSNLEG00000017570	-	68	100.000	ENSVVUG00000022054	RAB5B	81	100.000	Vulpes_vulpes