EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000017588 (Gene tree)
Gene ID: 100595317
Gene Symbol: PYM1
Alias: PYM|WIBG
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 31453 bases
Position: chr11:56888753-56920205
Accession: 100595317
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000032931	Mago-bind	PF09282.10	5.1e-14	1	1
ENSNLEP00000021344	Mago-bind	PF09282.10	1.1e-13	1	1
ENSNLEP00000024930	Mago-bind	PF09282.10	1.9e-13	1	1
ENSNLEP00000043208	Mago-bind	PF09282.10	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000056014	PYM1-202	1231	XM_012510362	ENSNLEP00000043208	204 (aa)	XP_012365816	A0A2I3HHT0
ENSNLET00000041646	PYM1-207	615	-	ENSNLEP00000024930	204 (aa)	-	A0A2I3FTH8
ENSNLET00000022427	PYM1-205	1095	XM_003252842	ENSNLEP00000021344	203 (aa)	XP_003252890	G1S755
ENSNLET00000043724	PYM1-204	234	-	ENSNLEP00000040110	77 (aa)	-	A0A2I3H9D0
ENSNLET00000047595	PYM1-203	135	-	ENSNLEP00000031583	44 (aa)	-	A0A2I3GJT4
ENSNLET00000036655	PYM1-201	135	-	ENSNLEP00000042247	44 (aa)	-	A0A2I3HFH4
ENSNLET00000047018	PYM1-206	636	-	ENSNLEP00000032931	211 (aa)	-	A0A2I3GNN5

Gene Model

Click here to download ENSNLEG00000017588's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03013	RNA transport	KEGG
nle03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000017588's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000017588	PYM1	100	100.000	ENSG00000170473	PYM1	100	100.000	Homo_sapiens
ENSNLEG00000017588	PYM1	99	57.944	ENSAPOG00000023045	pym1	94	58.049	Acanthochromis_polyacanthus
ENSNLEG00000017588	PYM1	93	92.553	ENSAMEG00000003091	PYM1	93	92.553	Ailuropoda_melanoleuca
ENSNLEG00000017588	PYM1	99	61.111	ENSACIG00000012769	pym1	94	59.420	Amphilophus_citrinellus
ENSNLEG00000017588	PYM1	99	58.294	ENSAOCG00000021358	pym1	94	58.824	Amphiprion_ocellaris
ENSNLEG00000017588	PYM1	99	58.294	ENSAPEG00000022679	pym1	94	58.824	Amphiprion_percula
ENSNLEG00000017588	PYM1	99	57.944	ENSATEG00000024022	pym1	94	60.488	Anabas_testudineus
ENSNLEG00000017588	PYM1	94	67.980	ENSACAG00000005714	PYM1	94	67.980	Anolis_carolinensis
ENSNLEG00000017588	PYM1	100	99.015	ENSANAG00000036967	PYM1	100	99.015	Aotus_nancymaae
ENSNLEG00000017588	PYM1	100	57.339	ENSAMXG00000007650	pym1	94	60.194	Astyanax_mexicanus
ENSNLEG00000017588	PYM1	94	95.812	ENSBTAG00000031146	PYM1	94	95.812	Bos_taurus
ENSNLEG00000017588	PYM1	100	98.522	ENSCJAG00000041077	PYM1	100	98.522	Callithrix_jacchus
ENSNLEG00000017588	PYM1	100	97.537	ENSCAFG00000000076	PYM1	100	97.537	Canis_familiaris
ENSNLEG00000017588	PYM1	100	97.537	ENSCAFG00020026099	PYM1	100	97.537	Canis_lupus_dingo
ENSNLEG00000017588	PYM1	94	93.194	ENSCHIG00000026207	PYM1	94	93.194	Capra_hircus
ENSNLEG00000017588	PYM1	94	95.288	ENSTSYG00000000787	PYM1	94	95.288	Carlito_syrichta
ENSNLEG00000017588	PYM1	88	93.296	ENSCAPG00000010374	PYM1	94	93.296	Cavia_aperea
ENSNLEG00000017588	PYM1	94	93.717	ENSCPOG00000031546	PYM1	94	93.717	Cavia_porcellus
ENSNLEG00000017588	PYM1	100	99.507	ENSCCAG00000026187	PYM1	100	99.507	Cebus_capucinus
ENSNLEG00000017588	PYM1	100	99.020	ENSCATG00000018801	PYM1	100	99.020	Cercocebus_atys
ENSNLEG00000017588	PYM1	94	88.482	ENSCLAG00000007964	PYM1	94	88.482	Chinchilla_lanigera
ENSNLEG00000017588	PYM1	95	98.958	ENSCSAG00000005291	PYM1	99	98.454	Chlorocebus_sabaeus
ENSNLEG00000017588	PYM1	98	42.593	ENSCING00000006448	-	93	41.463	Ciona_intestinalis
ENSNLEG00000017588	PYM1	98	36.111	ENSCSAVG00000009805	-	89	40.976	Ciona_savignyi
ENSNLEG00000017588	PYM1	100	99.020	ENSCANG00000020338	-	100	99.020	Colobus_angolensis_palliatus
ENSNLEG00000017588	PYM1	98	90.404	ENSCANG00000019757	-	86	95.263	Colobus_angolensis_palliatus
ENSNLEG00000017588	PYM1	94	75.916	ENSCGRG00001004231	-	93	75.916	Cricetulus_griseus_chok1gshd
ENSNLEG00000017588	PYM1	94	90.576	ENSCGRG00001018051	-	94	90.576	Cricetulus_griseus_chok1gshd
ENSNLEG00000017588	PYM1	94	75.916	ENSCGRG00000018933	-	93	75.916	Cricetulus_griseus_crigri
ENSNLEG00000017588	PYM1	94	90.576	ENSCGRG00000012495	-	94	90.576	Cricetulus_griseus_crigri
ENSNLEG00000017588	PYM1	94	55.882	ENSCSEG00000021531	pym1	94	58.128	Cynoglossus_semilaevis
ENSNLEG00000017588	PYM1	99	57.820	ENSCVAG00000017360	pym1	85	57.426	Cyprinodon_variegatus
ENSNLEG00000017588	PYM1	99	57.500	ENSDARG00000046024	pym1	94	55.072	Danio_rerio
ENSNLEG00000017588	PYM1	94	92.670	ENSDNOG00000048414	PYM1	86	92.670	Dasypus_novemcinctus
ENSNLEG00000017588	PYM1	94	94.764	ENSDORG00000029448	Pym1	94	94.764	Dipodomys_ordii
ENSNLEG00000017588	PYM1	93	35.644	FBgn0034918	Pym	88	33.668	Drosophila_melanogaster
ENSNLEG00000017588	PYM1	89	88.889	ENSETEG00000004461	-	94	88.889	Echinops_telfairi
ENSNLEG00000017588	PYM1	93	96.842	ENSEASG00005002271	PYM1	86	96.842	Equus_asinus_asinus
ENSNLEG00000017588	PYM1	100	97.044	ENSECAG00000011870	PYM1	100	97.044	Equus_caballus
ENSNLEG00000017588	PYM1	96	58.291	ENSELUG00000024250	pym1	94	59.091	Esox_lucius
ENSNLEG00000017588	PYM1	100	97.044	ENSFCAG00000013967	PYM1	100	97.044	Felis_catus
ENSNLEG00000017588	PYM1	94	94.241	ENSFDAG00000006314	PYM1	94	94.241	Fukomys_damarensis
ENSNLEG00000017588	PYM1	94	58.911	ENSFHEG00000005884	pym1	94	58.911	Fundulus_heteroclitus
ENSNLEG00000017588	PYM1	94	57.436	ENSGMOG00000007239	pym1	93	58.462	Gadus_morhua
ENSNLEG00000017588	PYM1	94	70.256	ENSGALG00000046169	PYM1	94	70.256	Gallus_gallus
ENSNLEG00000017588	PYM1	99	61.033	ENSGAFG00000003280	pym1	93	61.194	Gambusia_affinis
ENSNLEG00000017588	PYM1	100	55.340	ENSGACG00000010703	pym1	94	55.897	Gasterosteus_aculeatus
ENSNLEG00000017588	PYM1	92	64.216	ENSGAGG00000001973	PYM1	92	61.033	Gopherus_agassizii
ENSNLEG00000017588	PYM1	100	99.507	ENSGGOG00000043246	PYM1	100	99.507	Gorilla_gorilla
ENSNLEG00000017588	PYM1	94	60.294	ENSHBUG00000012719	pym1	94	60.294	Haplochromis_burtoni
ENSNLEG00000017588	PYM1	94	95.288	ENSHGLG00000017155	PYM1	94	95.288	Heterocephalus_glaber_female
ENSNLEG00000017588	PYM1	94	95.288	ENSHGLG00100015341	PYM1	94	95.288	Heterocephalus_glaber_male
ENSNLEG00000017588	PYM1	99	57.619	ENSHCOG00000007987	pym1	80	58.081	Hippocampus_comes
ENSNLEG00000017588	PYM1	100	59.242	ENSIPUG00000005975	wibga	94	58.537	Ictalurus_punctatus
ENSNLEG00000017588	PYM1	100	96.552	ENSSTOG00000014206	PYM1	100	96.552	Ictidomys_tridecemlineatus
ENSNLEG00000017588	PYM1	94	90.576	ENSJJAG00000013338	Pym1	94	90.576	Jaculus_jaculus
ENSNLEG00000017588	PYM1	99	56.757	ENSKMAG00000006351	pym1	95	55.869	Kryptolebias_marmoratus
ENSNLEG00000017588	PYM1	99	59.615	ENSLBEG00000015707	pym1	94	59.296	Labrus_bergylta
ENSNLEG00000017588	PYM1	89	60.733	ENSLACG00000014398	PYM1	90	60.104	Latimeria_chalumnae
ENSNLEG00000017588	PYM1	94	93.717	ENSLAFG00000002369	PYM1	94	93.717	Loxodonta_africana
ENSNLEG00000017588	PYM1	100	99.020	ENSMFAG00000003048	PYM1	100	99.020	Macaca_fascicularis
ENSNLEG00000017588	PYM1	100	99.015	ENSMMUG00000011002	PYM1	100	99.015	Macaca_mulatta
ENSNLEG00000017588	PYM1	100	99.020	ENSMNEG00000034677	PYM1	100	99.020	Macaca_nemestrina
ENSNLEG00000017588	PYM1	100	99.015	ENSMLEG00000007971	PYM1	100	99.015	Mandrillus_leucophaeus
ENSNLEG00000017588	PYM1	99	55.455	ENSMAMG00000001588	pym1	94	57.346	Mastacembelus_armatus
ENSNLEG00000017588	PYM1	94	59.804	ENSMZEG00005026458	pym1	94	59.804	Maylandia_zebra
ENSNLEG00000017588	PYM1	94	90.576	ENSMAUG00000007318	Pym1	94	90.576	Mesocricetus_auratus
ENSNLEG00000017588	PYM1	100	96.552	ENSMICG00000032962	PYM1	100	96.552	Microcebus_murinus
ENSNLEG00000017588	PYM1	94	88.482	ENSMOCG00000010208	Pym1	94	88.482	Microtus_ochrogaster
ENSNLEG00000017588	PYM1	99	57.282	ENSMMOG00000009301	pym1	92	60.309	Mola_mola
ENSNLEG00000017588	PYM1	99	58.491	ENSMALG00000013496	pym1	94	58.209	Monopterus_albus
ENSNLEG00000017588	PYM1	94	90.576	MGP_CAROLIEiJ_G0015953	Pym1	94	90.576	Mus_caroli
ENSNLEG00000017588	PYM1	94	91.623	ENSMUSG00000064030	Pym1	94	91.623	Mus_musculus
ENSNLEG00000017588	PYM1	94	89.529	MGP_PahariEiJ_G0031131	Pym1	94	89.529	Mus_pahari
ENSNLEG00000017588	PYM1	94	91.623	MGP_SPRETEiJ_G0016778	Pym1	94	91.623	Mus_spretus
ENSNLEG00000017588	PYM1	100	97.537	ENSMPUG00000000931	PYM1	100	97.537	Mustela_putorius_furo
ENSNLEG00000017588	PYM1	94	89.529	ENSMLUG00000003586	PYM1	90	93.923	Myotis_lucifugus
ENSNLEG00000017588	PYM1	89	92.778	ENSNGAG00000019207	Pym1	88	92.265	Nannospalax_galili
ENSNLEG00000017588	PYM1	99	61.033	ENSNBRG00000006951	pym1	94	60.294	Neolamprologus_brichardi
ENSNLEG00000017588	PYM1	88	80.337	ENSMEUG00000001017	PYM1	93	80.226	Notamacropus_eugenii
ENSNLEG00000017588	PYM1	94	89.062	ENSOPRG00000007797	PYM1	94	89.062	Ochotona_princeps
ENSNLEG00000017588	PYM1	94	94.241	ENSODEG00000004289	PYM1	94	94.241	Octodon_degus
ENSNLEG00000017588	PYM1	94	59.420	ENSONIG00000016740	pym1	94	59.420	Oreochromis_niloticus
ENSNLEG00000017588	PYM1	91	90.860	ENSOCUG00000025969	PYM1	83	90.860	Oryctolagus_cuniculus
ENSNLEG00000017588	PYM1	99	61.722	ENSORLG00000030592	pym1	94	61.307	Oryzias_latipes
ENSNLEG00000017588	PYM1	99	61.137	ENSORLG00020011264	pym1	94	61.194	Oryzias_latipes_hni
ENSNLEG00000017588	PYM1	99	62.500	ENSORLG00015005287	pym1	94	62.121	Oryzias_latipes_hsok
ENSNLEG00000017588	PYM1	99	62.136	ENSOMEG00000022250	pym1	94	61.421	Oryzias_melastigma
ENSNLEG00000017588	PYM1	95	96.373	ENSOGAG00000007038	PYM1	95	96.373	Otolemur_garnettii
ENSNLEG00000017588	PYM1	94	93.717	ENSOARG00000010856	PYM1	94	93.717	Ovis_aries
ENSNLEG00000017588	PYM1	100	100.000	ENSPPAG00000043630	PYM1	100	100.000	Pan_paniscus
ENSNLEG00000017588	PYM1	94	95.288	ENSPPRG00000013243	PYM1	94	95.288	Panthera_pardus
ENSNLEG00000017588	PYM1	94	94.764	ENSPTIG00000017380	PYM1	94	94.764	Panthera_tigris_altaica
ENSNLEG00000017588	PYM1	100	100.000	ENSPTRG00000005067	PYM1	100	100.000	Pan_troglodytes
ENSNLEG00000017588	PYM1	100	98.529	ENSPANG00000009562	PYM1	100	98.529	Papio_anubis
ENSNLEG00000017588	PYM1	100	60.849	ENSPKIG00000006301	pym1	94	60.000	Paramormyrops_kingsleyae
ENSNLEG00000017588	PYM1	94	64.251	ENSPSIG00000003043	PYM1	94	64.390	Pelodiscus_sinensis
ENSNLEG00000017588	PYM1	100	62.201	ENSPMGG00000023161	pym1	94	62.437	Periophthalmus_magnuspinnatus
ENSNLEG00000017588	PYM1	94	89.005	ENSPEMG00000009372	Pym1	94	89.005	Peromyscus_maniculatus_bairdii
ENSNLEG00000017588	PYM1	92	80.108	ENSPCIG00000024658	PYM1	91	79.787	Phascolarctos_cinereus
ENSNLEG00000017588	PYM1	99	62.085	ENSPFOG00000008193	pym1	93	62.312	Poecilia_formosa
ENSNLEG00000017588	PYM1	99	61.137	ENSPLAG00000009228	pym1	93	61.307	Poecilia_latipinna
ENSNLEG00000017588	PYM1	99	61.137	ENSPMEG00000001505	pym1	93	61.307	Poecilia_mexicana
ENSNLEG00000017588	PYM1	100	98.529	ENSPPYG00000004635	PYM1	100	98.529	Pongo_abelii
ENSNLEG00000017588	PYM1	100	97.537	ENSPCOG00000019706	PYM1	100	97.537	Propithecus_coquereli
ENSNLEG00000017588	PYM1	100	96.569	ENSPVAG00000011437	PYM1	100	96.569	Pteropus_vampyrus
ENSNLEG00000017588	PYM1	94	60.591	ENSPNYG00000012871	pym1	94	60.099	Pundamilia_nyererei
ENSNLEG00000017588	PYM1	99	58.716	ENSPNAG00000018833	pym1	94	59.330	Pygocentrus_nattereri
ENSNLEG00000017588	PYM1	94	84.896	ENSRNOG00000058130	Pym1	94	84.896	Rattus_norvegicus
ENSNLEG00000017588	PYM1	92	67.914	ENSRNOG00000049415	AABR07055413.1	91	62.766	Rattus_norvegicus
ENSNLEG00000017588	PYM1	100	94.581	ENSRBIG00000033362	PYM1	100	94.581	Rhinopithecus_bieti
ENSNLEG00000017588	PYM1	100	99.015	ENSRROG00000043620	PYM1	100	99.015	Rhinopithecus_roxellana
ENSNLEG00000017588	PYM1	100	99.507	ENSSBOG00000029393	PYM1	100	99.507	Saimiri_boliviensis_boliviensis
ENSNLEG00000017588	PYM1	93	81.481	ENSSHAG00000008280	PYM1	93	81.481	Sarcophilus_harrisii
ENSNLEG00000017588	PYM1	93	64.062	ENSSFOG00015021475	pym1	94	63.590	Scleropages_formosus
ENSNLEG00000017588	PYM1	99	58.294	ENSSMAG00000020912	pym1	94	59.406	Scophthalmus_maximus
ENSNLEG00000017588	PYM1	99	56.279	ENSSDUG00000001807	pym1	94	58.937	Seriola_dumerili
ENSNLEG00000017588	PYM1	99	60.488	ENSSLDG00000013730	pym1	94	62.437	Seriola_lalandi_dorsalis
ENSNLEG00000017588	PYM1	89	91.667	ENSSARG00000009569	PYM1	94	91.667	Sorex_araneus
ENSNLEG00000017588	PYM1	93	63.452	ENSSPUG00000015059	PYM1	94	63.500	Sphenodon_punctatus
ENSNLEG00000017588	PYM1	99	57.477	ENSSPAG00000020100	pym1	94	57.547	Stegastes_partitus
ENSNLEG00000017588	PYM1	94	94.764	ENSSSCG00000040825	PYM1	94	94.764	Sus_scrofa
ENSNLEG00000017588	PYM1	99	59.135	ENSTRUG00000021367	pym1	93	60.204	Takifugu_rubripes
ENSNLEG00000017588	PYM1	99	57.971	ENSTNIG00000012534	pym1	92	55.670	Tetraodon_nigroviridis
ENSNLEG00000017588	PYM1	89	88.889	ENSTBEG00000004208	PYM1	94	88.889	Tupaia_belangeri
ENSNLEG00000017588	PYM1	95	96.354	ENSTTRG00000014971	PYM1	98	96.354	Tursiops_truncatus
ENSNLEG00000017588	PYM1	100	96.059	ENSUAMG00000014521	PYM1	100	96.059	Ursus_americanus
ENSNLEG00000017588	PYM1	94	91.146	ENSUMAG00000016241	PYM1	82	95.028	Ursus_maritimus
ENSNLEG00000017588	PYM1	100	96.552	ENSVVUG00000022749	PYM1	100	96.552	Vulpes_vulpes
ENSNLEG00000017588	PYM1	94	62.626	ENSXETG00000021850	pym1	94	63.500	Xenopus_tropicalis
ENSNLEG00000017588	PYM1	99	61.137	ENSXMAG00000011649	pym1	93	61.307	Xiphophorus_maculatus