EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000018018 (Gene tree)
Gene ID: 100579252
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 85988 bases
Position: chr9:32329575-32415562
Accession: 100579252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000021892	EST1	PF10374.9	8.3e-25	1	1
ENSNLEP00000044288	EST1	PF10374.9	1e-24	1	1
ENSNLEP00000045497	EST1	PF10374.9	1e-24	1	1
ENSNLEP00000025194	EST1	PF10374.9	1.1e-24	1	1
ENSNLEP00000021892	EST1_DNA_bind	PF10373.9	1.2e-55	1	1
ENSNLEP00000044288	EST1_DNA_bind	PF10373.9	1.2e-55	1	1
ENSNLEP00000045497	EST1_DNA_bind	PF10373.9	1.3e-55	1	1
ENSNLEP00000025194	EST1_DNA_bind	PF10373.9	2.5e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000056330	SMG7-201	6188	XM_003264443	ENSNLEP00000044288	1145 (aa)	XP_003264491	A0A2I3HKV7
ENSNLET00000047818	SMG7-204	3558	-	ENSNLEP00000025194	1185 (aa)	-	A0A2I3FV57
ENSNLET00000033184	SMG7-203	3513	-	ENSNLEP00000045497	1170 (aa)	-	A0A2I3HPN2
ENSNLET00000022999	SMG7-202	5928	XM_003264441	ENSNLEP00000021892	1137 (aa)	XP_003264489	G1S8Q3
ENSNLET00000058809	SMG7-205	219	-	ENSNLEP00000024991	73 (aa)	-	A0A2I3FTX2

Gene Model

Click here to download ENSNLEG00000018018's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000018018's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000018018	SMG7	100	99.658	ENSG00000116698	SMG7	100	100.000	Homo_sapiens
ENSNLEG00000018018	SMG7	88	74.735	ENSAPOG00000009611	smg7	95	74.735	Acanthochromis_polyacanthus
ENSNLEG00000018018	SMG7	100	97.118	ENSAMEG00000002357	SMG7	100	97.118	Ailuropoda_melanoleuca
ENSNLEG00000018018	SMG7	100	61.856	ENSACIG00000015152	smg7	100	65.062	Amphilophus_citrinellus
ENSNLEG00000018018	SMG7	100	65.567	ENSAOCG00000013538	smg7	99	67.009	Amphiprion_ocellaris
ENSNLEG00000018018	SMG7	100	65.427	ENSAPEG00000007851	smg7	99	66.866	Amphiprion_percula
ENSNLEG00000018018	SMG7	99	65.874	ENSATEG00000006931	smg7	99	66.384	Anabas_testudineus
ENSNLEG00000018018	SMG7	100	89.151	ENSAPLG00000015811	SMG7	100	88.976	Anas_platyrhynchos
ENSNLEG00000018018	SMG7	100	87.706	ENSACAG00000014989	SMG7	98	87.182	Anolis_carolinensis
ENSNLEG00000018018	SMG7	100	98.777	ENSANAG00000028114	SMG7	100	98.769	Aotus_nancymaae
ENSNLEG00000018018	SMG7	100	64.622	ENSACLG00000022079	smg7	99	66.495	Astatotilapia_calliptera
ENSNLEG00000018018	SMG7	100	67.240	ENSAMXG00000020809	smg7	99	68.202	Astyanax_mexicanus
ENSNLEG00000018018	SMG7	100	96.667	ENSBTAG00000008003	SMG7	100	96.667	Bos_taurus
ENSNLEG00000018018	SMG7	100	98.515	ENSCJAG00000005135	SMG7	100	98.542	Callithrix_jacchus
ENSNLEG00000018018	SMG7	100	97.521	ENSCAFG00000013276	SMG7	100	97.521	Canis_familiaris
ENSNLEG00000018018	SMG7	100	97.521	ENSCAFG00020015475	SMG7	100	97.521	Canis_lupus_dingo
ENSNLEG00000018018	SMG7	97	96.646	ENSCHIG00000018192	SMG7	99	96.646	Capra_hircus
ENSNLEG00000018018	SMG7	100	97.625	ENSTSYG00000002667	SMG7	100	97.625	Carlito_syrichta
ENSNLEG00000018018	SMG7	99	97.770	ENSCPOG00000008906	SMG7	100	97.770	Cavia_porcellus
ENSNLEG00000018018	SMG7	100	98.865	ENSCCAG00000028596	SMG7	100	98.865	Cebus_capucinus
ENSNLEG00000018018	SMG7	100	99.658	ENSCATG00000011063	SMG7	100	99.658	Cercocebus_atys
ENSNLEG00000018018	SMG7	100	97.436	ENSCLAG00000010751	SMG7	100	97.436	Chinchilla_lanigera
ENSNLEG00000018018	SMG7	100	99.487	ENSCSAG00000012654	SMG7	100	99.487	Chlorocebus_sabaeus
ENSNLEG00000018018	SMG7	95	85.819	ENSCHOG00000010522	SMG7	93	89.971	Choloepus_hoffmanni
ENSNLEG00000018018	SMG7	100	92.167	ENSCPBG00000015724	SMG7	100	91.762	Chrysemys_picta_bellii
ENSNLEG00000018018	SMG7	100	99.563	ENSCANG00000015680	SMG7	100	99.563	Colobus_angolensis_palliatus
ENSNLEG00000018018	SMG7	99	96.312	ENSCGRG00001013705	Smg7	100	96.312	Cricetulus_griseus_chok1gshd
ENSNLEG00000018018	SMG7	98	96.258	ENSCGRG00000018401	Smg7	100	96.258	Cricetulus_griseus_crigri
ENSNLEG00000018018	SMG7	97	70.000	ENSCVAG00000011842	smg7	99	69.500	Cyprinodon_variegatus
ENSNLEG00000018018	SMG7	100	67.094	ENSDARG00000060767	smg7	99	67.934	Danio_rerio
ENSNLEG00000018018	SMG7	98	96.780	ENSDORG00000007331	Smg7	100	96.780	Dipodomys_ordii
ENSNLEG00000018018	SMG7	94	96.350	ENSETEG00000002654	SMG7	99	96.350	Echinops_telfairi
ENSNLEG00000018018	SMG7	100	97.949	ENSEASG00005006524	SMG7	100	97.949	Equus_asinus_asinus
ENSNLEG00000018018	SMG7	100	98.034	ENSECAG00000004313	SMG7	100	98.034	Equus_caballus
ENSNLEG00000018018	SMG7	93	96.956	ENSEEUG00000002024	SMG7	92	96.956	Erinaceus_europaeus
ENSNLEG00000018018	SMG7	100	65.508	ENSELUG00000010293	smg7	99	66.048	Esox_lucius
ENSNLEG00000018018	SMG7	99	97.776	ENSFCAG00000010900	SMG7	100	97.776	Felis_catus
ENSNLEG00000018018	SMG7	100	86.285	ENSFALG00000003047	SMG7	98	86.198	Ficedula_albicollis
ENSNLEG00000018018	SMG7	97	97.436	ENSFDAG00000012121	SMG7	99	97.326	Fukomys_damarensis
ENSNLEG00000018018	SMG7	99	64.691	ENSFHEG00000011073	smg7	99	64.055	Fundulus_heteroclitus
ENSNLEG00000018018	SMG7	82	73.523	ENSGMOG00000004916	smg7	87	72.710	Gadus_morhua
ENSNLEG00000018018	SMG7	100	89.510	ENSGALG00000004667	SMG7	100	89.336	Gallus_gallus
ENSNLEG00000018018	SMG7	99	64.741	ENSGAFG00000019000	smg7	99	64.569	Gambusia_affinis
ENSNLEG00000018018	SMG7	97	62.621	ENSGACG00000001634	smg7	99	65.149	Gasterosteus_aculeatus
ENSNLEG00000018018	SMG7	100	99.563	ENSGGOG00000002342	SMG7	100	99.563	Gorilla_gorilla
ENSNLEG00000018018	SMG7	100	65.225	ENSHBUG00000003726	smg7	97	72.589	Haplochromis_burtoni
ENSNLEG00000018018	SMG7	100	97.361	ENSHGLG00000009353	SMG7	100	97.415	Heterocephalus_glaber_female
ENSNLEG00000018018	SMG7	97	89.232	ENSHGLG00100004878	-	99	89.232	Heterocephalus_glaber_male
ENSNLEG00000018018	SMG7	100	97.449	ENSHGLG00100009637	-	100	97.449	Heterocephalus_glaber_male
ENSNLEG00000018018	SMG7	100	68.103	ENSIPUG00000016997	smg7	99	68.674	Ictalurus_punctatus
ENSNLEG00000018018	SMG7	98	98.172	ENSSTOG00000000401	SMG7	100	98.172	Ictidomys_tridecemlineatus
ENSNLEG00000018018	SMG7	97	95.587	ENSJJAG00000012351	Smg7	99	95.587	Jaculus_jaculus
ENSNLEG00000018018	SMG7	93	70.500	ENSKMAG00000004900	smg7	97	70.500	Kryptolebias_marmoratus
ENSNLEG00000018018	SMG7	52	63.000	ENSLBEG00000005220	-	75	64.623	Labrus_bergylta
ENSNLEG00000018018	SMG7	99	66.350	ENSLBEG00000002983	smg7	99	66.523	Labrus_bergylta
ENSNLEG00000018018	SMG7	100	74.871	ENSLACG00000000972	SMG7	99	76.021	Latimeria_chalumnae
ENSNLEG00000018018	SMG7	100	69.330	ENSLOCG00000002010	smg7	98	69.958	Lepisosteus_oculatus
ENSNLEG00000018018	SMG7	98	97.650	ENSLAFG00000008186	SMG7	100	97.650	Loxodonta_africana
ENSNLEG00000018018	SMG7	100	99.573	ENSMFAG00000031653	SMG7	100	99.573	Macaca_fascicularis
ENSNLEG00000018018	SMG7	100	99.658	ENSMMUG00000018458	SMG7	100	99.658	Macaca_mulatta
ENSNLEG00000018018	SMG7	100	99.651	ENSMNEG00000034798	SMG7	100	99.651	Macaca_nemestrina
ENSNLEG00000018018	SMG7	100	99.658	ENSMLEG00000037170	SMG7	100	99.658	Mandrillus_leucophaeus
ENSNLEG00000018018	SMG7	88	65.377	ENSMAMG00000018733	smg7	85	65.571	Mastacembelus_armatus
ENSNLEG00000018018	SMG7	100	65.089	ENSMZEG00005015247	smg7	99	66.068	Maylandia_zebra
ENSNLEG00000018018	SMG7	97	89.398	ENSMGAG00000001561	SMG7	98	89.218	Meleagris_gallopavo
ENSNLEG00000018018	SMG7	100	95.515	ENSMAUG00000019484	Smg7	100	96.693	Mesocricetus_auratus
ENSNLEG00000018018	SMG7	100	98.593	ENSMICG00000007145	SMG7	100	98.593	Microcebus_murinus
ENSNLEG00000018018	SMG7	100	95.515	ENSMOCG00000020748	Smg7	100	96.519	Microtus_ochrogaster
ENSNLEG00000018018	SMG7	99	64.298	ENSMMOG00000001524	smg7	99	64.589	Mola_mola
ENSNLEG00000018018	SMG7	92	93.264	ENSMODG00000007139	SMG7	99	93.264	Monodelphis_domestica
ENSNLEG00000018018	SMG7	97	68.657	ENSMALG00000000061	smg7	95	68.657	Monopterus_albus
ENSNLEG00000018018	SMG7	100	95.163	MGP_CAROLIEiJ_G0014704	Smg7	100	96.258	Mus_caroli
ENSNLEG00000018018	SMG7	100	95.075	ENSMUSG00000042772	Smg7	100	96.171	Mus_musculus
ENSNLEG00000018018	SMG7	100	95.251	MGP_PahariEiJ_G0027940	Smg7	100	96.258	Mus_pahari
ENSNLEG00000018018	SMG7	100	95.163	MGP_SPRETEiJ_G0015511	Smg7	100	96.258	Mus_spretus
ENSNLEG00000018018	SMG7	100	93.624	ENSMPUG00000011732	SMG7	97	97.504	Mustela_putorius_furo
ENSNLEG00000018018	SMG7	97	96.911	ENSMLUG00000015417	SMG7	99	96.911	Myotis_lucifugus
ENSNLEG00000018018	SMG7	100	96.394	ENSNGAG00000009836	Smg7	100	96.693	Nannospalax_galili
ENSNLEG00000018018	SMG7	98	61.478	ENSNBRG00000024343	smg7	98	70.476	Neolamprologus_brichardi
ENSNLEG00000018018	SMG7	71	93.089	ENSMEUG00000004681	SMG7	73	93.089	Notamacropus_eugenii
ENSNLEG00000018018	SMG7	94	84.749	ENSOPRG00000013942	SMG7	96	84.566	Ochotona_princeps
ENSNLEG00000018018	SMG7	100	97.361	ENSODEG00000010390	SMG7	100	97.476	Octodon_degus
ENSNLEG00000018018	SMG7	99	65.114	ENSONIG00000000277	smg7	99	66.096	Oreochromis_niloticus
ENSNLEG00000018018	SMG7	100	87.478	ENSOANG00000000994	SMG7	100	91.223	Ornithorhynchus_anatinus
ENSNLEG00000018018	SMG7	100	89.915	ENSOCUG00000005887	SMG7	95	90.085	Oryctolagus_cuniculus
ENSNLEG00000018018	SMG7	100	63.055	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSNLEG00000018018	SMG7	100	63.481	ENSORLG00020015779	smg7	99	64.107	Oryzias_latipes_hni
ENSNLEG00000018018	SMG7	100	63.350	ENSORLG00015012289	smg7	99	63.801	Oryzias_latipes_hsok
ENSNLEG00000018018	SMG7	100	63.095	ENSOMEG00000002328	smg7	99	62.687	Oryzias_melastigma
ENSNLEG00000018018	SMG7	94	96.807	ENSOGAG00000003107	SMG7	93	96.715	Otolemur_garnettii
ENSNLEG00000018018	SMG7	100	96.496	ENSOARG00000001352	SMG7	100	96.496	Ovis_aries
ENSNLEG00000018018	SMG7	100	99.825	ENSPPAG00000031619	SMG7	100	99.825	Pan_paniscus
ENSNLEG00000018018	SMG7	100	98.065	ENSPPRG00000011222	SMG7	100	98.065	Panthera_pardus
ENSNLEG00000018018	SMG7	100	97.991	ENSPTIG00000007242	SMG7	100	97.991	Panthera_tigris_altaica
ENSNLEG00000018018	SMG7	100	99.825	ENSPTRG00000001764	SMG7	100	99.825	Pan_troglodytes
ENSNLEG00000018018	SMG7	100	99.658	ENSPANG00000004520	SMG7	100	99.658	Papio_anubis
ENSNLEG00000018018	SMG7	100	65.285	ENSPKIG00000007242	smg7	99	68.500	Paramormyrops_kingsleyae
ENSNLEG00000018018	SMG7	97	92.084	ENSPSIG00000012201	SMG7	99	91.821	Pelodiscus_sinensis
ENSNLEG00000018018	SMG7	59	57.000	ENSPMGG00000021833	smg7	89	57.500	Periophthalmus_magnuspinnatus
ENSNLEG00000018018	SMG7	98	95.387	ENSPEMG00000011315	Smg7	100	95.387	Peromyscus_maniculatus_bairdii
ENSNLEG00000018018	SMG7	100	93.805	ENSPCIG00000003786	SMG7	100	93.585	Phascolarctos_cinereus
ENSNLEG00000018018	SMG7	100	63.629	ENSPFOG00000019219	smg7	99	63.027	Poecilia_formosa
ENSNLEG00000018018	SMG7	99	64.858	ENSPLAG00000001446	smg7	99	64.686	Poecilia_latipinna
ENSNLEG00000018018	SMG7	96	64.146	ENSPMEG00000005218	smg7	99	63.968	Poecilia_mexicana
ENSNLEG00000018018	SMG7	87	61.919	ENSPREG00000019039	smg7	91	61.858	Poecilia_reticulata
ENSNLEG00000018018	SMG7	100	99.912	ENSPPYG00000000427	SMG7	100	99.912	Pongo_abelii
ENSNLEG00000018018	SMG7	97	82.056	ENSPCAG00000008360	SMG7	94	85.886	Procavia_capensis
ENSNLEG00000018018	SMG7	100	98.462	ENSPCOG00000011996	SMG7	100	98.462	Propithecus_coquereli
ENSNLEG00000018018	SMG7	89	91.827	ENSPVAG00000000851	SMG7	89	91.827	Pteropus_vampyrus
ENSNLEG00000018018	SMG7	100	65.081	ENSPNYG00000007643	smg7	99	66.351	Pundamilia_nyererei
ENSNLEG00000018018	SMG7	100	67.808	ENSPNAG00000011374	smg7	98	69.697	Pygocentrus_nattereri
ENSNLEG00000018018	SMG7	100	95.462	ENSRNOG00000027962	Smg7	100	96.825	Rattus_norvegicus
ENSNLEG00000018018	SMG7	100	99.573	ENSRBIG00000036316	SMG7	100	99.573	Rhinopithecus_bieti
ENSNLEG00000018018	SMG7	100	99.573	ENSRROG00000035719	SMG7	100	99.573	Rhinopithecus_roxellana
ENSNLEG00000018018	SMG7	100	98.777	ENSSBOG00000023454	SMG7	100	98.777	Saimiri_boliviensis_boliviensis
ENSNLEG00000018018	SMG7	100	93.240	ENSSHAG00000013147	SMG7	100	92.976	Sarcophilus_harrisii
ENSNLEG00000018018	SMG7	100	68.852	ENSSFOG00015017252	smg7	99	76.842	Scleropages_formosus
ENSNLEG00000018018	SMG7	100	65.529	ENSSMAG00000006067	smg7	99	66.150	Scophthalmus_maximus
ENSNLEG00000018018	SMG7	96	72.648	ENSSDUG00000017543	smg7	99	66.019	Seriola_dumerili
ENSNLEG00000018018	SMG7	99	90.548	ENSSPUG00000002064	SMG7	99	90.371	Sphenodon_punctatus
ENSNLEG00000018018	SMG7	100	66.149	ENSSPAG00000008733	smg7	100	66.064	Stegastes_partitus
ENSNLEG00000018018	SMG7	100	97.607	ENSSSCG00000015558	SMG7	100	97.607	Sus_scrofa
ENSNLEG00000018018	SMG7	99	89.427	ENSTGUG00000003928	SMG7	100	89.339	Taeniopygia_guttata
ENSNLEG00000018018	SMG7	100	61.083	ENSTNIG00000002802	smg7	99	63.782	Tetraodon_nigroviridis
ENSNLEG00000018018	SMG7	78	96.610	ENSTBEG00000003220	SMG7	75	96.610	Tupaia_belangeri
ENSNLEG00000018018	SMG7	94	97.534	ENSTTRG00000014778	SMG7	94	97.534	Tursiops_truncatus
ENSNLEG00000018018	SMG7	96	93.607	ENSUAMG00000017473	SMG7	100	93.607	Ursus_americanus
ENSNLEG00000018018	SMG7	100	93.712	ENSUMAG00000016389	SMG7	100	97.634	Ursus_maritimus
ENSNLEG00000018018	SMG7	100	97.607	ENSVVUG00000008976	SMG7	100	97.607	Vulpes_vulpes
ENSNLEG00000018018	SMG7	100	71.057	ENSXETG00000012528	smg7	100	71.032	Xenopus_tropicalis
ENSNLEG00000018018	SMG7	99	64.464	ENSXMAG00000007123	smg7	99	64.635	Xiphophorus_maculatus