EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000029067 (Gene tree)
Gene ID: 100591564
Gene Symbol: SNRPB
Alias: COD|SNRPB1|Sm-B/B'|SmB/SmB'|snRNP-B
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 8921 bases
Position: chr13:35997001-36005921
Accession: 100591564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000042703	LSM	PF01423.22	1e-19	1	1
ENSNLEP00000040118	LSM	PF01423.22	1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000042059	SNRPB-201	1010	XM_003273428	ENSNLEP00000040118	240 (aa)	XP_003273476	A0A2I3H907
ENSNLET00000043644	SNRPB-202	714	XM_012511847	ENSNLEP00000042703	237 (aa)	XP_012367301	A0A2I3HGC9

Gene Model

Click here to download ENSNLEG00000029067's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03040	Spliceosome	KEGG
nle05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000029067's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000029067	SNRPB	93	76.364	ENSNLEG00000001376	SNRPN	92	76.471

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000029067	SNRPB	100	100.000	ENSG00000125835	SNRPB	100	100.000	Homo_sapiens
ENSNLEG00000029067	SNRPB	76	92.778	ENSAPOG00000019606	snrpb	56	94.643	Acanthochromis_polyacanthus
ENSNLEG00000029067	SNRPB	99	100.000	ENSAMEG00000011353	SNRPB	98	100.000	Ailuropoda_melanoleuca
ENSNLEG00000029067	SNRPB	74	92.000	ENSACIG00000014480	snrpb	71	94.444	Amphilophus_citrinellus
ENSNLEG00000029067	SNRPB	76	92.778	ENSAOCG00000006876	snrpb	69	94.643	Amphiprion_ocellaris
ENSNLEG00000029067	SNRPB	76	92.778	ENSAPEG00000021585	snrpb	71	94.643	Amphiprion_percula
ENSNLEG00000029067	SNRPB	76	92.222	ENSATEG00000009836	snrpb	69	94.048	Anabas_testudineus
ENSNLEG00000029067	SNRPB	90	95.305	ENSACAG00000002053	SNRPB	92	95.305	Anolis_carolinensis
ENSNLEG00000029067	SNRPB	98	91.064	ENSANAG00000036271	-	76	93.122	Aotus_nancymaae
ENSNLEG00000029067	SNRPB	100	100.000	ENSANAG00000024443	-	100	100.000	Aotus_nancymaae
ENSNLEG00000029067	SNRPB	76	92.778	ENSACLG00000014707	snrpb	69	94.643	Astatotilapia_calliptera
ENSNLEG00000029067	SNRPB	76	92.896	ENSAMXG00000029434	snrpb	70	94.048	Astyanax_mexicanus
ENSNLEG00000029067	SNRPB	96	99.561	ENSBTAG00000001038	SNRPB	99	99.563	Bos_taurus
ENSNLEG00000029067	SNRPB	90	92.019	ENSCJAG00000023097	-	79	92.063	Callithrix_jacchus
ENSNLEG00000029067	SNRPB	96	100.000	ENSCJAG00000020971	-	99	100.000	Callithrix_jacchus
ENSNLEG00000029067	SNRPB	80	88.021	ENSCAFG00000031109	-	79	84.817	Canis_familiaris
ENSNLEG00000029067	SNRPB	96	100.000	ENSCAFG00000006693	-	99	100.000	Canis_familiaris
ENSNLEG00000029067	SNRPB	100	100.000	ENSCAFG00020016981	-	100	100.000	Canis_lupus_dingo
ENSNLEG00000029067	SNRPB	96	99.561	ENSCHIG00000025449	-	99	99.563	Capra_hircus
ENSNLEG00000029067	SNRPB	99	98.729	ENSTSYG00000014498	-	99	100.000	Carlito_syrichta
ENSNLEG00000029067	SNRPB	97	75.862	ENSTSYG00000032303	-	55	79.333	Carlito_syrichta
ENSNLEG00000029067	SNRPB	99	100.000	ENSCAPG00000012669	SNRPB	99	100.000	Cavia_aperea
ENSNLEG00000029067	SNRPB	96	100.000	ENSCPOG00000039408	SNRPB	99	100.000	Cavia_porcellus
ENSNLEG00000029067	SNRPB	100	100.000	ENSCCAG00000026002	SNRPB	100	100.000	Cebus_capucinus
ENSNLEG00000029067	SNRPB	54	88.189	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSNLEG00000029067	SNRPB	100	100.000	ENSCATG00000030230	SNRPB	100	100.000	Cercocebus_atys
ENSNLEG00000029067	SNRPB	100	98.750	ENSCLAG00000012442	SNRPB	100	98.750	Chinchilla_lanigera
ENSNLEG00000029067	SNRPB	96	100.000	ENSCSAG00000010840	SNRPB	99	100.000	Chlorocebus_sabaeus
ENSNLEG00000029067	SNRPB	100	96.667	ENSCPBG00000026801	SNRPB	100	96.667	Chrysemys_picta_bellii
ENSNLEG00000029067	SNRPB	100	100.000	ENSCANG00000019461	SNRPB	100	100.000	Colobus_angolensis_palliatus
ENSNLEG00000029067	SNRPB	96	100.000	ENSCGRG00001023046	Snrpb	99	100.000	Cricetulus_griseus_chok1gshd
ENSNLEG00000029067	SNRPB	95	100.000	ENSCGRG00000010423	Snrpb	100	100.000	Cricetulus_griseus_crigri
ENSNLEG00000029067	SNRPB	77	92.308	ENSCSEG00000020328	snrpb	70	94.643	Cynoglossus_semilaevis
ENSNLEG00000029067	SNRPB	70	93.413	ENSDARG00000011125	snrpb	69	94.643	Danio_rerio
ENSNLEG00000029067	SNRPB	73	94.767	ENSDNOG00000007896	-	71	94.767	Dasypus_novemcinctus
ENSNLEG00000029067	SNRPB	100	100.000	ENSDNOG00000015545	-	100	100.000	Dasypus_novemcinctus
ENSNLEG00000029067	SNRPB	96	99.565	ENSDORG00000029558	Snrpb	100	99.565	Dipodomys_ordii
ENSNLEG00000029067	SNRPB	62	70.470	FBgn0262601	SmB	74	70.470	Drosophila_melanogaster
ENSNLEG00000029067	SNRPB	77	78.571	ENSETEG00000006830	SNRPB	74	77.381	Echinops_telfairi
ENSNLEG00000029067	SNRPB	76	80.000	ENSEBUG00000007467	SNRPB	62	88.591	Eptatretus_burgeri
ENSNLEG00000029067	SNRPB	96	99.561	ENSEASG00005012991	SNRPB	99	99.563	Equus_asinus_asinus
ENSNLEG00000029067	SNRPB	98	99.145	ENSECAG00000011944	SNRPB	99	100.000	Equus_caballus
ENSNLEG00000029067	SNRPB	97	98.276	ENSEEUG00000015568	SNRPB	82	98.276	Erinaceus_europaeus
ENSNLEG00000029067	SNRPB	61	95.833	ENSELUG00000014564	snrpb	71	93.210	Esox_lucius
ENSNLEG00000029067	SNRPB	96	100.000	ENSFCAG00000034090	-	99	100.000	Felis_catus
ENSNLEG00000029067	SNRPB	97	96.121	ENSFALG00000004866	SNRPB	100	96.121	Ficedula_albicollis
ENSNLEG00000029067	SNRPB	99	100.000	ENSFDAG00000009937	SNRPB	99	100.000	Fukomys_damarensis
ENSNLEG00000029067	SNRPB	100	96.250	ENSGALG00000035421	SNRPN	100	96.250	Gallus_gallus
ENSNLEG00000029067	SNRPB	73	92.486	ENSGAFG00000019558	snrpb	73	93.452	Gambusia_affinis
ENSNLEG00000029067	SNRPB	77	91.209	ENSGACG00000003262	snrpb	70	94.643	Gasterosteus_aculeatus
ENSNLEG00000029067	SNRPB	100	96.667	ENSGAGG00000001308	SNRPB	100	96.667	Gopherus_agassizii
ENSNLEG00000029067	SNRPB	96	100.000	ENSGGOG00000016138	SNRPB	99	100.000	Gorilla_gorilla
ENSNLEG00000029067	SNRPB	76	92.778	ENSHBUG00000008369	snrpb	69	94.643	Haplochromis_burtoni
ENSNLEG00000029067	SNRPB	96	100.000	ENSHGLG00000016241	-	99	100.000	Heterocephalus_glaber_female
ENSNLEG00000029067	SNRPB	63	90.000	ENSHGLG00000016505	-	72	90.000	Heterocephalus_glaber_female
ENSNLEG00000029067	SNRPB	63	90.000	ENSHGLG00100004178	-	72	90.000	Heterocephalus_glaber_male
ENSNLEG00000029067	SNRPB	100	100.000	ENSHGLG00100012877	-	100	100.000	Heterocephalus_glaber_male
ENSNLEG00000029067	SNRPB	77	92.308	ENSHCOG00000014888	snrpb	70	94.643	Hippocampus_comes
ENSNLEG00000029067	SNRPB	70	93.413	ENSIPUG00000024569	SNRPB	70	94.643	Ictalurus_punctatus
ENSNLEG00000029067	SNRPB	91	81.944	ENSSTOG00000027821	-	62	99.265	Ictidomys_tridecemlineatus
ENSNLEG00000029067	SNRPB	100	98.333	ENSSTOG00000033664	-	100	98.333	Ictidomys_tridecemlineatus
ENSNLEG00000029067	SNRPB	98	99.142	ENSJJAG00000024170	Snrpb	99	100.000	Jaculus_jaculus
ENSNLEG00000029067	SNRPB	73	94.186	ENSKMAG00000014494	snrpb	68	95.238	Kryptolebias_marmoratus
ENSNLEG00000029067	SNRPB	77	92.308	ENSLBEG00000005678	snrpb	70	94.643	Labrus_bergylta
ENSNLEG00000029067	SNRPB	93	93.182	ENSLACG00000011459	SNRPB	92	93.213	Latimeria_chalumnae
ENSNLEG00000029067	SNRPB	70	94.048	ENSLOCG00000002687	snrpb	70	95.238	Lepisosteus_oculatus
ENSNLEG00000029067	SNRPB	97	95.671	ENSLAFG00000017588	SNRPB	100	95.671	Loxodonta_africana
ENSNLEG00000029067	SNRPB	99	98.291	ENSMFAG00000038756	SNRPB	99	100.000	Macaca_fascicularis
ENSNLEG00000029067	SNRPB	96	100.000	ENSMMUG00000010050	SNRPB	99	100.000	Macaca_mulatta
ENSNLEG00000029067	SNRPB	99	98.291	ENSMNEG00000027954	SNRPB	99	100.000	Macaca_nemestrina
ENSNLEG00000029067	SNRPB	100	100.000	ENSMLEG00000022346	SNRPB	100	100.000	Mandrillus_leucophaeus
ENSNLEG00000029067	SNRPB	76	92.265	ENSMAMG00000009294	snrpb	67	94.611	Mastacembelus_armatus
ENSNLEG00000029067	SNRPB	76	92.778	ENSMZEG00005011856	snrpb	69	94.643	Maylandia_zebra
ENSNLEG00000029067	SNRPB	99	82.773	ENSMICG00000015983	-	87	89.947	Microcebus_murinus
ENSNLEG00000029067	SNRPB	96	99.561	ENSMICG00000016519	SNRPB	99	99.563	Microcebus_murinus
ENSNLEG00000029067	SNRPB	70	70.060	ENSMOCG00000021362	-	72	73.410	Microtus_ochrogaster
ENSNLEG00000029067	SNRPB	97	98.701	ENSMOCG00000002892	-	99	99.563	Microtus_ochrogaster
ENSNLEG00000029067	SNRPB	78	90.860	ENSMMOG00000013226	snrpb	71	94.611	Mola_mola
ENSNLEG00000029067	SNRPB	76	92.222	ENSMALG00000020839	snrpb	56	94.048	Monopterus_albus
ENSNLEG00000029067	SNRPB	96	99.561	MGP_CAROLIEiJ_G0024293	Snrpb	99	99.563	Mus_caroli
ENSNLEG00000029067	SNRPB	96	99.561	ENSMUSG00000027404	Snrpb	99	99.563	Mus_musculus
ENSNLEG00000029067	SNRPB	96	99.561	MGP_PahariEiJ_G0025738	Snrpb	99	99.563	Mus_pahari
ENSNLEG00000029067	SNRPB	96	99.561	MGP_SPRETEiJ_G0025213	Snrpb	99	99.563	Mus_spretus
ENSNLEG00000029067	SNRPB	96	100.000	ENSMPUG00000009283	SNRPB	99	100.000	Mustela_putorius_furo
ENSNLEG00000029067	SNRPB	100	96.667	ENSMLUG00000016951	SNRPB	100	96.667	Myotis_lucifugus
ENSNLEG00000029067	SNRPB	96	100.000	ENSNGAG00000012051	Snrpb	99	100.000	Nannospalax_galili
ENSNLEG00000029067	SNRPB	75	91.525	ENSNBRG00000006353	snrpb	62	93.293	Neolamprologus_brichardi
ENSNLEG00000029067	SNRPB	95	97.333	ENSMEUG00000015625	SNRPB	100	97.333	Notamacropus_eugenii
ENSNLEG00000029067	SNRPB	100	95.417	ENSODEG00000016060	-	100	95.417	Octodon_degus
ENSNLEG00000029067	SNRPB	96	100.000	ENSODEG00000004305	-	99	100.000	Octodon_degus
ENSNLEG00000029067	SNRPB	76	92.778	ENSONIG00000000248	snrpb	69	94.643	Oreochromis_niloticus
ENSNLEG00000029067	SNRPB	90	71.831	ENSOCUG00000026813	-	71	71.687	Oryctolagus_cuniculus
ENSNLEG00000029067	SNRPB	100	99.583	ENSOCUG00000014042	-	100	99.583	Oryctolagus_cuniculus
ENSNLEG00000029067	SNRPB	75	93.296	ENSOCUG00000022423	-	86	96.429	Oryctolagus_cuniculus
ENSNLEG00000029067	SNRPB	100	97.083	ENSOCUG00000028215	-	100	97.083	Oryctolagus_cuniculus
ENSNLEG00000029067	SNRPB	90	94.884	ENSOCUG00000021456	-	78	95.767	Oryctolagus_cuniculus
ENSNLEG00000029067	SNRPB	76	92.265	ENSORLG00000021862	snrpb	69	94.643	Oryzias_latipes
ENSNLEG00000029067	SNRPB	100	100.000	ENSOGAG00000016149	SNRPB	100	100.000	Otolemur_garnettii
ENSNLEG00000029067	SNRPB	96	99.561	ENSOARG00000006740	SNRPB	99	99.563	Ovis_aries
ENSNLEG00000029067	SNRPB	96	100.000	ENSPPAG00000036314	SNRPB	99	100.000	Pan_paniscus
ENSNLEG00000029067	SNRPB	100	100.000	ENSPPRG00000003233	-	100	100.000	Panthera_pardus
ENSNLEG00000029067	SNRPB	99	100.000	ENSPTIG00000007468	SNRPB	99	100.000	Panthera_tigris_altaica
ENSNLEG00000029067	SNRPB	96	100.000	ENSPTRG00000013176	SNRPB	99	100.000	Pan_troglodytes
ENSNLEG00000029067	SNRPB	100	100.000	ENSPANG00000020362	SNRPB	100	100.000	Papio_anubis
ENSNLEG00000029067	SNRPB	70	92.814	ENSPKIG00000002865	snrpb	70	94.048	Paramormyrops_kingsleyae
ENSNLEG00000029067	SNRPB	99	96.653	ENSPSIG00000014125	SNRPB	98	96.653	Pelodiscus_sinensis
ENSNLEG00000029067	SNRPB	75	90.449	ENSPMGG00000016349	snrpb	69	92.025	Periophthalmus_magnuspinnatus
ENSNLEG00000029067	SNRPB	96	100.000	ENSPEMG00000007948	Snrpb	99	100.000	Peromyscus_maniculatus_bairdii
ENSNLEG00000029067	SNRPB	99	97.908	ENSPCIG00000004694	SNRPB	99	97.908	Phascolarctos_cinereus
ENSNLEG00000029067	SNRPB	80	76.842	ENSPREG00000015515	snrpb	62	95.556	Poecilia_reticulata
ENSNLEG00000029067	SNRPB	96	100.000	ENSPPYG00000010841	SNRPB	99	100.000	Pongo_abelii
ENSNLEG00000029067	SNRPB	96	100.000	ENSPCOG00000013686	SNRPB	99	100.000	Propithecus_coquereli
ENSNLEG00000029067	SNRPB	95	98.678	ENSPVAG00000017013	SNRPB	80	98.678	Pteropus_vampyrus
ENSNLEG00000029067	SNRPB	76	92.778	ENSPNYG00000014788	snrpb	69	94.643	Pundamilia_nyererei
ENSNLEG00000029067	SNRPB	76	92.896	ENSPNAG00000016126	snrpb	70	94.643	Pygocentrus_nattereri
ENSNLEG00000029067	SNRPB	96	100.000	ENSRNOG00000006961	Snrpb	99	100.000	Rattus_norvegicus
ENSNLEG00000029067	SNRPB	100	99.583	ENSRBIG00000040505	SNRPB	100	99.583	Rhinopithecus_bieti
ENSNLEG00000029067	SNRPB	100	100.000	ENSRROG00000036094	SNRPB	100	100.000	Rhinopithecus_roxellana
ENSNLEG00000029067	SNRPB	100	100.000	ENSSBOG00000027310	SNRPB	100	100.000	Saimiri_boliviensis_boliviensis
ENSNLEG00000029067	SNRPB	100	98.333	ENSSHAG00000010394	SNRPB	100	98.333	Sarcophilus_harrisii
ENSNLEG00000029067	SNRPB	70	92.262	ENSSFOG00015002870	snrpb	70	93.452	Scleropages_formosus
ENSNLEG00000029067	SNRPB	77	91.758	ENSSMAG00000006766	snrpb	70	94.048	Scophthalmus_maximus
ENSNLEG00000029067	SNRPB	76	92.778	ENSSDUG00000018539	snrpb	69	94.643	Seriola_dumerili
ENSNLEG00000029067	SNRPB	76	92.778	ENSSLDG00000022391	snrpb	69	94.643	Seriola_lalandi_dorsalis
ENSNLEG00000029067	SNRPB	73	84.884	ENSSARG00000003084	SNRPB	74	84.884	Sorex_araneus
ENSNLEG00000029067	SNRPB	99	96.653	ENSSPUG00000015659	SNRPB	100	96.653	Sphenodon_punctatus
ENSNLEG00000029067	SNRPB	76	92.778	ENSSPAG00000021992	snrpb	69	94.643	Stegastes_partitus
ENSNLEG00000029067	SNRPB	97	99.127	ENSSSCG00000040857	-	99	99.563	Sus_scrofa
ENSNLEG00000029067	SNRPB	96	80.263	ENSSSCG00000011966	-	91	75.943	Sus_scrofa
ENSNLEG00000029067	SNRPB	75	79.661	ENSTGUG00000005684	SNRPB	59	96.429	Taeniopygia_guttata
ENSNLEG00000029067	SNRPB	77	91.758	ENSTRUG00000023094	snrpb	72	94.048	Takifugu_rubripes
ENSNLEG00000029067	SNRPB	77	91.758	ENSTNIG00000002991	snrpb	70	94.048	Tetraodon_nigroviridis
ENSNLEG00000029067	SNRPB	73	100.000	ENSUAMG00000005984	-	83	100.000	Ursus_americanus
ENSNLEG00000029067	SNRPB	58	99.270	ENSUMAG00000002123	-	63	99.270	Ursus_maritimus
ENSNLEG00000029067	SNRPB	100	99.583	ENSVVUG00000025654	-	100	99.583	Vulpes_vulpes
ENSNLEG00000029067	SNRPB	62	43.713	ENSVVUG00000018297	-	52	43.713	Vulpes_vulpes
ENSNLEG00000029067	SNRPB	100	76.667	ENSVVUG00000010086	-	85	81.122	Vulpes_vulpes
ENSNLEG00000029067	SNRPB	92	95.475	ENSXETG00000027266	snrpb	93	95.475	Xenopus_tropicalis
ENSNLEG00000029067	SNRPB	93	65.022	ENSXMAG00000028767	snrpb	58	95.556	Xiphophorus_maculatus