EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000030787 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 1030 bases
Position: chr19:65955777-65956806
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000029805	RRM_1	PF00076.22	1.2e-27	1	2
ENSNLEP00000029805	RRM_1	PF00076.22	1.2e-27	2	2
ENSNLEP00000027393	RRM_1	PF00076.22	1.6e-27	1	2
ENSNLEP00000027393	RRM_1	PF00076.22	1.6e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000032997	-	927	-	ENSNLEP00000027393	308 (aa)	-	A0A2I3G7L2
ENSNLET00000044071	-	843	-	ENSNLEP00000029805	280 (aa)	-	A0A2I3GER1

Gene Model

Click here to download ENSNLEG00000030787's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000030787's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000030787	-	57	39.759	ENSNLEG00000008088	-	77	46.429
ENSNLEG00000030787	-	73	36.207	ENSNLEG00000015661	SRSF9	85	36.364
ENSNLEG00000030787	-	64	82.888	ENSNLEG00000006524	SRSF6	94	67.385
ENSNLEG00000030787	-	80	47.368	ENSNLEG00000001615	SRSF5	94	50.735
ENSNLEG00000030787	-	57	38.323	ENSNLEG00000033316	-	85	33.628

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000030787	-	62	76.667	ENSAPOG00000023399	-	61	76.374	Acanthochromis_polyacanthus
ENSNLEG00000030787	-	62	70.857	ENSACIG00000018649	srsf4	90	66.942	Amphilophus_citrinellus
ENSNLEG00000030787	-	57	68.750	ENSAOCG00000005997	srsf4	92	69.325	Amphiprion_ocellaris
ENSNLEG00000030787	-	61	67.582	ENSATEG00000005680	srsf4	60	67.935	Anabas_testudineus
ENSNLEG00000030787	-	62	70.286	ENSACLG00000003395	srsf4	97	53.906	Astatotilapia_calliptera
ENSNLEG00000030787	-	62	78.022	ENSACLG00000021269	-	51	79.235	Astatotilapia_calliptera
ENSNLEG00000030787	-	95	45.149	ENSAMXG00000034811	srsf4	92	56.897	Astyanax_mexicanus
ENSNLEG00000030787	-	98	43.607	WBGene00004698	rsp-1	97	44.755	Caenorhabditis_elegans
ENSNLEG00000030787	-	61	47.340	ENSCING00000011362	-	65	47.568	Ciona_intestinalis
ENSNLEG00000030787	-	61	51.562	ENSCING00000020631	-	79	52.083	Ciona_intestinalis
ENSNLEG00000030787	-	61	52.261	ENSCING00000012370	-	67	53.266	Ciona_intestinalis
ENSNLEG00000030787	-	61	50.262	ENSCING00000024718	-	57	50.256	Ciona_intestinalis
ENSNLEG00000030787	-	61	58.989	ENSCSAVG00000002581	-	70	58.011	Ciona_savignyi
ENSNLEG00000030787	-	62	65.946	ENSCSEG00000010058	srsf4	75	65.323	Cynoglossus_semilaevis
ENSNLEG00000030787	-	62	65.385	ENSDARG00000105293	srsf4	80	62.353	Danio_rerio
ENSNLEG00000030787	-	62	74.157	ENSDNOG00000047961	SRSF4	51	59.924	Dasypus_novemcinctus
ENSNLEG00000030787	-	61	57.065	FBgn0004587	B52	96	52.308	Drosophila_melanogaster
ENSNLEG00000030787	-	75	52.752	ENSEBUG00000001681	srsf4	67	58.011	Eptatretus_burgeri
ENSNLEG00000030787	-	55	55.625	ENSEBUG00000003129	srsf4	69	55.625	Eptatretus_burgeri
ENSNLEG00000030787	-	99	50.331	ENSELUG00000017551	srsf4	95	52.672	Esox_lucius
ENSNLEG00000030787	-	62	70.225	ENSFHEG00000007472	srsf4	87	69.512	Fundulus_heteroclitus
ENSNLEG00000030787	-	62	64.246	ENSGMOG00000012906	srsf4	75	60.166	Gadus_morhua
ENSNLEG00000030787	-	90	51.527	ENSGAFG00000018496	srsf4	65	62.295	Gambusia_affinis
ENSNLEG00000030787	-	56	69.444	ENSGACG00000002389	srsf4	55	69.780	Gasterosteus_aculeatus
ENSNLEG00000030787	-	62	67.391	ENSHCOG00000012540	srsf4	68	67.391	Hippocampus_comes
ENSNLEG00000030787	-	62	72.000	ENSKMAG00000013631	srsf4	81	60.766	Kryptolebias_marmoratus
ENSNLEG00000030787	-	61	74.586	ENSLOCG00000001442	-	50	79.459	Lepisosteus_oculatus
ENSNLEG00000030787	-	62	70.056	ENSMAMG00000004888	srsf4	68	72.000	Mastacembelus_armatus
ENSNLEG00000030787	-	62	70.286	ENSMZEG00005026275	srsf4	97	53.906	Maylandia_zebra
ENSNLEG00000030787	-	100	55.369	ENSMMOG00000013653	srsf4	98	48.495	Mola_mola
ENSNLEG00000030787	-	56	73.596	ENSMODG00000011052	SRSF4	55	73.596	Monodelphis_domestica
ENSNLEG00000030787	-	85	62.762	ENSMALG00000013392	srsf4	66	73.143	Monopterus_albus
ENSNLEG00000030787	-	56	74.157	ENSOCUG00000001837	SRSF4	53	59.615	Oryctolagus_cuniculus
ENSNLEG00000030787	-	62	68.927	ENSORLG00020016052	srsf4	66	71.508	Oryzias_latipes_hni
ENSNLEG00000030787	-	96	54.212	ENSORLG00015007566	srsf4	70	71.508	Oryzias_latipes_hsok
ENSNLEG00000030787	-	62	68.927	ENSOMEG00000005541	srsf4	51	71.508	Oryzias_melastigma
ENSNLEG00000030787	-	62	64.921	ENSPMGG00000013436	srsf4	95	62.205	Periophthalmus_magnuspinnatus
ENSNLEG00000030787	-	56	56.354	ENSPMAG00000009397	srsf4	68	56.593	Petromyzon_marinus
ENSNLEG00000030787	-	62	71.910	ENSPFOG00000001306	srsf4	75	56.159	Poecilia_formosa
ENSNLEG00000030787	-	62	71.910	ENSPLAG00000008812	srsf4	64	61.749	Poecilia_latipinna
ENSNLEG00000030787	-	62	69.565	ENSPMEG00000023638	srsf4	53	69.565	Poecilia_mexicana
ENSNLEG00000030787	-	62	73.143	ENSPREG00000009639	srsf4	50	71.910	Poecilia_reticulata
ENSNLEG00000030787	-	62	67.222	ENSPNYG00000003796	srsf4	95	54.114	Pundamilia_nyererei
ENSNLEG00000030787	-	61	71.264	ENSPNAG00000023844	srsf4	53	71.023	Pygocentrus_nattereri
ENSNLEG00000030787	-	51	73.469	ENSSHAG00000012407	SRSF4	50	73.469	Sarcophilus_harrisii
ENSNLEG00000030787	-	62	68.966	ENSSFOG00015020292	srsf4	81	64.865	Scleropages_formosus
ENSNLEG00000030787	-	62	68.649	ENSSMAG00000001707	srsf4	50	69.189	Scophthalmus_maximus
ENSNLEG00000030787	-	62	70.056	ENSSDUG00000007387	srsf4	70	56.134	Seriola_dumerili
ENSNLEG00000030787	-	76	61.472	ENSSPAG00000014538	srsf4	83	68.908	Stegastes_partitus
ENSNLEG00000030787	-	84	58.779	ENSTRUG00000011891	srsf4	62	65.464	Takifugu_rubripes
ENSNLEG00000030787	-	62	72.571	ENSXCOG00000018826	srsf4	89	63.333	Xiphophorus_couchianus
ENSNLEG00000030787	-	62	71.809	ENSXCOG00000003212	-	55	74.603	Xiphophorus_couchianus