EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000030884 (Gene tree)
Gene ID: 105737508
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 19
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 7234 bases
Position: chr2:126856649-126863882
Accession: 105737508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000047067	SRP19	PF01922.17	8.5e-26	1	1
ENSNLEP00000036268	SRP19	PF01922.17	2.2e-14	1	2
ENSNLEP00000036268	SRP19	PF01922.17	2.2e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000052459	-	1506	XM_003259832	ENSNLEP00000047067	110 (aa)	XP_003259880	A0A2I3HU51
ENSNLET00000041358	-	1402	XM_003259831	ENSNLEP00000036268	120 (aa)	XP_003259879	A0A2I3GY22

Gene Model

Click here to download ENSNLEG00000030884's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000030884's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000030884	-	96	79.245	ENSNLEG00000035364	-	94	70.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000030884	-	67	90.000	ENSCAFG00020008822	-	62	94.521	Canis_lupus_dingo
ENSNLEG00000030884	-	100	100.000	ENSCATG00000030502	-	100	100.000	Cercocebus_atys
ENSNLEG00000030884	-	93	95.495	ENSCLAG00000008943	-	93	95.495	Chinchilla_lanigera
ENSNLEG00000030884	-	100	100.000	ENSCANG00000041172	-	100	100.000	Colobus_angolensis_palliatus
ENSNLEG00000030884	-	61	91.781	ENSCGRG00001012009	-	66	91.781	Cricetulus_griseus_chok1gshd
ENSNLEG00000030884	-	68	96.296	ENSEEUG00000009240	-	100	96.296	Erinaceus_europaeus
ENSNLEG00000030884	-	93	72.414	ENSGGOG00000038737	-	93	72.414	Gorilla_gorilla
ENSNLEG00000030884	-	100	99.167	ENSGGOG00000027482	SRP19	100	99.167	Gorilla_gorilla
ENSNLEG00000030884	-	96	78.302	ENSHGLG00000006069	-	82	75.194	Heterocephalus_glaber_female
ENSNLEG00000030884	-	96	78.302	ENSHGLG00100006563	-	82	75.194	Heterocephalus_glaber_male
ENSNLEG00000030884	-	100	100.000	ENSMFAG00000040995	-	100	100.000	Macaca_fascicularis
ENSNLEG00000030884	-	100	99.167	ENSMMUG00000000331	-	100	99.167	Macaca_mulatta
ENSNLEG00000030884	-	100	99.167	ENSMLEG00000030461	-	100	99.167	Mandrillus_leucophaeus
ENSNLEG00000030884	-	96	67.925	ENSMOCG00000010964	-	94	66.929	Microtus_ochrogaster
ENSNLEG00000030884	-	93	96.396	ENSODEG00000003165	-	93	96.396	Octodon_degus
ENSNLEG00000030884	-	93	96.396	ENSODEG00000005033	-	93	96.396	Octodon_degus
ENSNLEG00000030884	-	82	88.776	ENSODEG00000000221	-	89	88.776	Octodon_degus
ENSNLEG00000030884	-	93	95.495	ENSODEG00000016828	-	93	95.495	Octodon_degus
ENSNLEG00000030884	-	93	69.828	ENSPPAG00000040638	-	93	69.828	Pan_paniscus
ENSNLEG00000030884	-	93	70.175	ENSPTRG00000045571	-	93	70.175	Pan_troglodytes
ENSNLEG00000030884	-	93	65.766	ENSPCOG00000019414	-	91	65.766	Propithecus_coquereli
ENSNLEG00000030884	-	100	100.000	ENSRROG00000033974	-	100	100.000	Rhinopithecus_roxellana
ENSNLEG00000030884	-	65	96.154	ENSSHAG00000009452	-	100	96.154	Sarcophilus_harrisii
ENSNLEG00000030884	-	59	74.648	ENSSPAG00000005240	-	57	74.648	Stegastes_partitus