EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000031426 (Gene tree)
Gene ID: 100582453
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 27153 bases
Position: chr12:76663194-76690346
Accession: 100582453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000043275	RTC	PF01137.21	1.6e-86	1	1
ENSNLEP00000044625	RTC	PF01137.21	9e-81	1	1
ENSNLEP00000043275	RTC_insert	PF05189.13	1.8e-24	1	1
ENSNLEP00000044625	RTC_insert	PF05189.13	2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000041204	RTCA-202	1140	XM_003260115	ENSNLEP00000044625	379 (aa)	XP_003260163	A0A2I3HM88
ENSNLET00000041058	RTCA-201	2570	XM_003260114	ENSNLEP00000043275	366 (aa)	XP_003260162	A0A2I3HIC5

Gene Model

Click here to download ENSNLEG00000031426's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000031426's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000031426	RTCA	100	99.472	ENSG00000137996	RTCA	100	100.000	Homo_sapiens
ENSNLEG00000031426	RTCA	99	71.468	ENSAPOG00000001345	rtca	98	71.468	Acanthochromis_polyacanthus
ENSNLEG00000031426	RTCA	73	94.052	ENSAMEG00000008855	RTCA	100	94.052	Ailuropoda_melanoleuca
ENSNLEG00000031426	RTCA	99	72.022	ENSACIG00000019643	rtca	99	72.022	Amphilophus_citrinellus
ENSNLEG00000031426	RTCA	100	70.765	ENSAOCG00000014979	rtca	99	70.765	Amphiprion_ocellaris
ENSNLEG00000031426	RTCA	100	70.765	ENSAPEG00000006945	rtca	99	70.765	Amphiprion_percula
ENSNLEG00000031426	RTCA	96	71.510	ENSATEG00000006315	rtca	96	71.510	Anabas_testudineus
ENSNLEG00000031426	RTCA	96	80.226	ENSAPLG00000015430	RTCA	100	80.226	Anas_platyrhynchos
ENSNLEG00000031426	RTCA	100	97.268	ENSANAG00000025446	RTCA	100	97.268	Aotus_nancymaae
ENSNLEG00000031426	RTCA	100	70.219	ENSACLG00000020770	rtca	99	70.219	Astatotilapia_calliptera
ENSNLEG00000031426	RTCA	100	72.678	ENSAMXG00000043271	rtca	100	72.678	Astyanax_mexicanus
ENSNLEG00000031426	RTCA	100	95.628	ENSBTAG00000006321	RTCA	100	95.628	Bos_taurus
ENSNLEG00000031426	RTCA	100	97.814	ENSCJAG00000003398	RTCA	100	97.814	Callithrix_jacchus
ENSNLEG00000031426	RTCA	100	95.628	ENSCAFG00000020010	RTCA	68	95.628	Canis_familiaris
ENSNLEG00000031426	RTCA	100	95.628	ENSCAFG00020011528	RTCA	57	95.628	Canis_lupus_dingo
ENSNLEG00000031426	RTCA	100	95.355	ENSCHIG00000018937	RTCA	100	95.355	Capra_hircus
ENSNLEG00000031426	RTCA	100	92.896	ENSTSYG00000011305	RTCA	100	92.896	Carlito_syrichta
ENSNLEG00000031426	RTCA	100	97.541	ENSCCAG00000021844	RTCA	100	97.541	Cebus_capucinus
ENSNLEG00000031426	RTCA	100	98.681	ENSCATG00000019364	RTCA	100	98.681	Cercocebus_atys
ENSNLEG00000031426	RTCA	87	95.584	ENSCLAG00000006125	RTCA	100	95.584	Chinchilla_lanigera
ENSNLEG00000031426	RTCA	100	98.907	ENSCSAG00000001509	RTCA	100	98.907	Chlorocebus_sabaeus
ENSNLEG00000031426	RTCA	100	93.443	ENSCHOG00000005211	RTCA	100	93.443	Choloepus_hoffmanni
ENSNLEG00000031426	RTCA	100	83.607	ENSCPBG00000026658	RTCA	100	83.607	Chrysemys_picta_bellii
ENSNLEG00000031426	RTCA	98	56.233	ENSCING00000007875	-	98	56.233	Ciona_intestinalis
ENSNLEG00000031426	RTCA	98	53.889	ENSCSAVG00000007269	-	98	53.889	Ciona_savignyi
ENSNLEG00000031426	RTCA	100	98.681	ENSCANG00000040106	RTCA	100	98.681	Colobus_angolensis_palliatus
ENSNLEG00000031426	RTCA	73	90.706	ENSCGRG00001013163	Rtca	85	90.706	Cricetulus_griseus_chok1gshd
ENSNLEG00000031426	RTCA	99	68.767	ENSCSEG00000000530	rtca	98	68.767	Cynoglossus_semilaevis
ENSNLEG00000031426	RTCA	100	58.743	ENSCVAG00000021809	rtca	100	58.743	Cyprinodon_variegatus
ENSNLEG00000031426	RTCA	100	74.044	ENSDARG00000002215	rtca	100	74.044	Danio_rerio
ENSNLEG00000031426	RTCA	100	94.262	ENSDNOG00000000456	RTCA	100	94.262	Dasypus_novemcinctus
ENSNLEG00000031426	RTCA	100	92.350	ENSDORG00000005448	Rtca	100	92.350	Dipodomys_ordii
ENSNLEG00000031426	RTCA	98	38.547	FBgn0025630	Rtca	98	38.547	Drosophila_melanogaster
ENSNLEG00000031426	RTCA	95	53.955	ENSEBUG00000008556	rtca	97	53.955	Eptatretus_burgeri
ENSNLEG00000031426	RTCA	100	94.536	ENSEASG00005015926	RTCA	100	94.536	Equus_asinus_asinus
ENSNLEG00000031426	RTCA	100	94.536	ENSECAG00000019831	RTCA	100	94.536	Equus_caballus
ENSNLEG00000031426	RTCA	91	82.948	ENSEEUG00000001165	RTCA	100	82.948	Erinaceus_europaeus
ENSNLEG00000031426	RTCA	99	71.745	ENSELUG00000003741	rtca	99	71.745	Esox_lucius
ENSNLEG00000031426	RTCA	100	95.082	ENSFCAG00000024460	RTCA	100	95.082	Felis_catus
ENSNLEG00000031426	RTCA	91	84.084	ENSFALG00000002443	RTCA	90	84.084	Ficedula_albicollis
ENSNLEG00000031426	RTCA	100	95.628	ENSFDAG00000012070	-	100	95.628	Fukomys_damarensis
ENSNLEG00000031426	RTCA	98	74.862	ENSFDAG00000016084	-	100	74.862	Fukomys_damarensis
ENSNLEG00000031426	RTCA	68	61.847	ENSFHEG00000002868	rtca	90	70.673	Fundulus_heteroclitus
ENSNLEG00000031426	RTCA	100	69.126	ENSGMOG00000013264	rtca	100	69.126	Gadus_morhua
ENSNLEG00000031426	RTCA	100	83.060	ENSGALG00000005277	RTCA	100	83.060	Gallus_gallus
ENSNLEG00000031426	RTCA	100	71.311	ENSGAFG00000011853	rtca	99	71.311	Gambusia_affinis
ENSNLEG00000031426	RTCA	100	69.126	ENSGACG00000013497	rtca	100	69.126	Gasterosteus_aculeatus
ENSNLEG00000031426	RTCA	80	84.642	ENSGAGG00000023306	RTCA	100	84.642	Gopherus_agassizii
ENSNLEG00000031426	RTCA	100	98.634	ENSGGOG00000044018	-	100	98.634	Gorilla_gorilla
ENSNLEG00000031426	RTCA	100	99.472	ENSGGOG00000009546	-	100	99.472	Gorilla_gorilla
ENSNLEG00000031426	RTCA	100	69.945	ENSHBUG00000002114	rtca	99	69.945	Haplochromis_burtoni
ENSNLEG00000031426	RTCA	100	94.262	ENSHGLG00000002617	RTCA	100	94.262	Heterocephalus_glaber_female
ENSNLEG00000031426	RTCA	100	94.262	ENSHGLG00100006056	RTCA	100	94.262	Heterocephalus_glaber_male
ENSNLEG00000031426	RTCA	100	64.754	ENSHCOG00000020628	rtca	89	64.754	Hippocampus_comes
ENSNLEG00000031426	RTCA	100	72.951	ENSIPUG00000024803	rtca	100	72.951	Ictalurus_punctatus
ENSNLEG00000031426	RTCA	100	88.525	ENSSTOG00000013528	-	100	88.525	Ictidomys_tridecemlineatus
ENSNLEG00000031426	RTCA	100	83.379	ENSSTOG00000033099	-	100	83.379	Ictidomys_tridecemlineatus
ENSNLEG00000031426	RTCA	100	66.393	ENSJJAG00000016178	Rtca	100	66.393	Jaculus_jaculus
ENSNLEG00000031426	RTCA	99	71.745	ENSKMAG00000006651	rtca	98	71.745	Kryptolebias_marmoratus
ENSNLEG00000031426	RTCA	99	68.975	ENSLBEG00000028971	rtca	99	68.975	Labrus_bergylta
ENSNLEG00000031426	RTCA	88	68.224	ENSLBEG00000002448	-	99	68.224	Labrus_bergylta
ENSNLEG00000031426	RTCA	100	78.415	ENSLACG00000013666	RTCA	100	78.415	Latimeria_chalumnae
ENSNLEG00000031426	RTCA	100	73.224	ENSLOCG00000000093	rtca	99	73.224	Lepisosteus_oculatus
ENSNLEG00000031426	RTCA	100	93.716	ENSLAFG00000001473	RTCA	100	93.716	Loxodonta_africana
ENSNLEG00000031426	RTCA	100	98.945	ENSMFAG00000034132	RTCA	100	98.945	Macaca_fascicularis
ENSNLEG00000031426	RTCA	100	98.417	ENSMMUG00000019105	RTCA	100	98.417	Macaca_mulatta
ENSNLEG00000031426	RTCA	84	98.706	ENSMNEG00000037163	RTCA	100	98.706	Macaca_nemestrina
ENSNLEG00000031426	RTCA	100	81.530	ENSMLEG00000042151	RTCA	100	81.530	Mandrillus_leucophaeus
ENSNLEG00000031426	RTCA	100	72.951	ENSMAMG00000016536	rtca	100	72.951	Mastacembelus_armatus
ENSNLEG00000031426	RTCA	100	70.219	ENSMZEG00005017945	rtca	99	70.219	Maylandia_zebra
ENSNLEG00000031426	RTCA	87	81.505	ENSMGAG00000006892	RTCA	100	80.938	Meleagris_gallopavo
ENSNLEG00000031426	RTCA	100	91.530	ENSMAUG00000008488	Rtca	100	91.530	Mesocricetus_auratus
ENSNLEG00000031426	RTCA	84	96.117	ENSMICG00000008643	RTCA	100	96.117	Microcebus_murinus
ENSNLEG00000031426	RTCA	100	91.803	ENSMOCG00000016660	Rtca	100	91.803	Microtus_ochrogaster
ENSNLEG00000031426	RTCA	84	71.197	ENSMMOG00000007750	rtca	100	71.197	Mola_mola
ENSNLEG00000031426	RTCA	100	90.437	ENSMODG00000003557	RTCA	100	90.437	Monodelphis_domestica
ENSNLEG00000031426	RTCA	100	72.404	ENSMALG00000020844	rtca	100	72.404	Monopterus_albus
ENSNLEG00000031426	RTCA	100	91.257	MGP_CAROLIEiJ_G0025565	Rtca	100	91.257	Mus_caroli
ENSNLEG00000031426	RTCA	100	90.710	ENSMUSG00000000339	Rtca	100	90.845	Mus_musculus
ENSNLEG00000031426	RTCA	100	90.984	MGP_PahariEiJ_G0027011	Rtca	100	90.984	Mus_pahari
ENSNLEG00000031426	RTCA	100	90.984	MGP_SPRETEiJ_G0026515	Rtca	100	90.984	Mus_spretus
ENSNLEG00000031426	RTCA	100	95.355	ENSMPUG00000012119	RTCA	100	95.355	Mustela_putorius_furo
ENSNLEG00000031426	RTCA	100	86.921	ENSMLUG00000009922	RTCA	100	86.921	Myotis_lucifugus
ENSNLEG00000031426	RTCA	100	91.803	ENSNGAG00000011540	Rtca	99	91.803	Nannospalax_galili
ENSNLEG00000031426	RTCA	100	70.219	ENSNBRG00000003062	rtca	99	70.219	Neolamprologus_brichardi
ENSNLEG00000031426	RTCA	59	96.341	ENSMEUG00000010030	-	77	72.727	Notamacropus_eugenii
ENSNLEG00000031426	RTCA	73	87.361	ENSOPRG00000012092	RTCA	71	87.361	Ochotona_princeps
ENSNLEG00000031426	RTCA	95	94.828	ENSODEG00000006990	RTCA	96	94.872	Octodon_degus
ENSNLEG00000031426	RTCA	100	70.219	ENSONIG00000007753	rtca	99	70.219	Oreochromis_niloticus
ENSNLEG00000031426	RTCA	87	87.382	ENSOANG00000012055	RTCA	98	87.382	Ornithorhynchus_anatinus
ENSNLEG00000031426	RTCA	100	95.628	ENSOCUG00000014247	RTCA	100	95.628	Oryctolagus_cuniculus
ENSNLEG00000031426	RTCA	100	70.219	ENSORLG00000013605	rtca	100	70.219	Oryzias_latipes
ENSNLEG00000031426	RTCA	100	70.219	ENSORLG00020001904	rtca	100	70.219	Oryzias_latipes_hni
ENSNLEG00000031426	RTCA	100	70.219	ENSORLG00015021064	rtca	100	70.219	Oryzias_latipes_hsok
ENSNLEG00000031426	RTCA	100	71.038	ENSOMEG00000000756	rtca	100	71.038	Oryzias_melastigma
ENSNLEG00000031426	RTCA	100	85.519	ENSOGAG00000005627	RTCA	100	85.519	Otolemur_garnettii
ENSNLEG00000031426	RTCA	87	94.340	ENSOARG00000018122	RTCA	100	94.340	Ovis_aries
ENSNLEG00000031426	RTCA	100	98.945	ENSPPAG00000035119	RTCA	100	99.029	Pan_paniscus
ENSNLEG00000031426	RTCA	100	95.082	ENSPPRG00000000350	RTCA	100	95.082	Panthera_pardus
ENSNLEG00000031426	RTCA	100	94.809	ENSPTIG00000012816	RTCA	100	94.809	Panthera_tigris_altaica
ENSNLEG00000031426	RTCA	100	98.945	ENSPTRG00000001004	RTCA	100	99.029	Pan_troglodytes
ENSNLEG00000031426	RTCA	100	98.087	ENSPANG00000000346	RTCA	100	98.087	Papio_anubis
ENSNLEG00000031426	RTCA	100	74.044	ENSPKIG00000001653	rtca	100	74.044	Paramormyrops_kingsleyae
ENSNLEG00000031426	RTCA	100	84.153	ENSPSIG00000011408	RTCA	100	84.153	Pelodiscus_sinensis
ENSNLEG00000031426	RTCA	100	90.984	ENSPEMG00000018582	Rtca	100	90.984	Peromyscus_maniculatus_bairdii
ENSNLEG00000031426	RTCA	99	59.116	ENSPMAG00000009110	rtca	99	58.904	Petromyzon_marinus
ENSNLEG00000031426	RTCA	100	90.710	ENSPCIG00000007684	RTCA	100	90.710	Phascolarctos_cinereus
ENSNLEG00000031426	RTCA	100	71.662	ENSPFOG00000004824	rtca	100	71.662	Poecilia_formosa
ENSNLEG00000031426	RTCA	100	71.858	ENSPLAG00000011753	rtca	99	71.858	Poecilia_latipinna
ENSNLEG00000031426	RTCA	100	71.858	ENSPMEG00000020469	rtca	99	71.858	Poecilia_mexicana
ENSNLEG00000031426	RTCA	100	72.678	ENSPREG00000001365	rtca	99	72.678	Poecilia_reticulata
ENSNLEG00000031426	RTCA	100	99.180	ENSPPYG00000001115	RTCA	100	99.180	Pongo_abelii
ENSNLEG00000031426	RTCA	100	90.710	ENSPCAG00000005076	RTCA	100	90.710	Procavia_capensis
ENSNLEG00000031426	RTCA	100	96.721	ENSPCOG00000005603	RTCA	100	96.721	Propithecus_coquereli
ENSNLEG00000031426	RTCA	100	92.876	ENSPVAG00000009478	RTCA	100	92.876	Pteropus_vampyrus
ENSNLEG00000031426	RTCA	100	70.219	ENSPNYG00000004722	rtca	99	70.219	Pundamilia_nyererei
ENSNLEG00000031426	RTCA	100	72.678	ENSPNAG00000022270	rtca	100	72.678	Pygocentrus_nattereri
ENSNLEG00000031426	RTCA	100	90.984	ENSRNOG00000014575	Rtca	100	90.984	Rattus_norvegicus
ENSNLEG00000031426	RTCA	100	98.153	ENSRBIG00000041180	RTCA	100	98.153	Rhinopithecus_bieti
ENSNLEG00000031426	RTCA	100	98.153	ENSRROG00000024929	RTCA	100	98.153	Rhinopithecus_roxellana
ENSNLEG00000031426	RTCA	100	96.995	ENSSBOG00000028626	RTCA	100	96.995	Saimiri_boliviensis_boliviensis
ENSNLEG00000031426	RTCA	100	90.437	ENSSHAG00000001758	RTCA	100	90.437	Sarcophilus_harrisii
ENSNLEG00000031426	RTCA	98	68.889	ENSSMAG00000014680	rtca	97	68.889	Scophthalmus_maximus
ENSNLEG00000031426	RTCA	98	71.389	ENSSDUG00000015585	rtca	97	71.389	Seriola_dumerili
ENSNLEG00000031426	RTCA	96	71.510	ENSSLDG00000018985	rtca	95	71.510	Seriola_lalandi_dorsalis
ENSNLEG00000031426	RTCA	87	85.804	ENSSARG00000013993	RTCA	100	85.804	Sorex_araneus
ENSNLEG00000031426	RTCA	100	70.219	ENSSPAG00000011938	rtca	99	70.219	Stegastes_partitus
ENSNLEG00000031426	RTCA	100	94.809	ENSSSCG00000006865	RTCA	100	94.809	Sus_scrofa
ENSNLEG00000031426	RTCA	100	83.607	ENSTGUG00000005154	RTCA	100	83.607	Taeniopygia_guttata
ENSNLEG00000031426	RTCA	100	70.765	ENSTRUG00000008799	rtca	100	70.765	Takifugu_rubripes
ENSNLEG00000031426	RTCA	100	71.311	ENSTNIG00000004725	rtca	100	71.311	Tetraodon_nigroviridis
ENSNLEG00000031426	RTCA	60	90.909	ENSTBEG00000000943	RTCA	82	66.387	Tupaia_belangeri
ENSNLEG00000031426	RTCA	100	93.668	ENSTTRG00000015327	RTCA	100	93.668	Tursiops_truncatus
ENSNLEG00000031426	RTCA	94	92.711	ENSUAMG00000017265	RTCA	96	92.711	Ursus_americanus
ENSNLEG00000031426	RTCA	100	94.262	ENSUMAG00000007881	RTCA	100	94.262	Ursus_maritimus
ENSNLEG00000031426	RTCA	87	85.174	ENSVPAG00000001039	RTCA	87	85.152	Vicugna_pacos
ENSNLEG00000031426	RTCA	100	95.355	ENSVVUG00000022041	RTCA	68	95.355	Vulpes_vulpes
ENSNLEG00000031426	RTCA	99	65.123	ENSXETG00000031661	RTCA	99	65.123	Xenopus_tropicalis
ENSNLEG00000031426	RTCA	100	62.295	ENSXCOG00000008002	rtca	100	62.295	Xiphophorus_couchianus
ENSNLEG00000031426	RTCA	100	71.585	ENSXMAG00000005482	rtca	99	71.585	Xiphophorus_maculatus