EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000032459 (Gene tree)
Gene ID: 100603506
Gene Symbol: -
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 62721 bases
Position: chr22a:28508678-28571398
Accession: 100603506
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000026221	RRM_1	PF00076.22	3e-12	1	1
ENSNLEP00000031773	RRM_1	PF00076.22	3.3e-12	1	1
ENSNLEP00000027372	RRM_1	PF00076.22	5.6e-12	1	1
ENSNLEP00000035969	RRM_1	PF00076.22	7.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000040682	-	414	XM_004091863	ENSNLEP00000027372	109 (aa)	XP_004091911	A0A2I3G7F3
ENSNLET00000046694	-	1091	XM_012498140	ENSNLEP00000035969	124 (aa)	XP_012353594	A0A2I3GX88
ENSNLET00000048094	-	279	XM_003260816	ENSNLEP00000031773	93 (aa)	XP_003260864	A0A2I3GKC7
ENSNLET00000036639	-	858	XM_004091864	ENSNLEP00000026221	98 (aa)	XP_004091912	A0A2I3G251

Gene Model

Click here to download ENSNLEG00000032459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000032459's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000032459	-	76	39.474	ENSNLEG00000008059	MSI2	65	35.065
ENSNLEG00000032459	-	85	33.333	ENSNLEG00000008636	HNRNPDL	65	33.333
ENSNLEG00000032459	-	92	98.000	ENSNLEG00000027238	-	96	98.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000032459	-	89	92.727	ENSG00000119705	SLIRP	100	91.935	Homo_sapiens
ENSNLEG00000032459	-	82	43.820	ENSAPOG00000001298	slirp	89	43.820	Acanthochromis_polyacanthus
ENSNLEG00000032459	-	95	79.545	ENSAMEG00000003975	SLIRP	100	76.923	Ailuropoda_melanoleuca
ENSNLEG00000032459	-	81	53.333	ENSACIG00000023083	slirp	89	53.333	Amphilophus_citrinellus
ENSNLEG00000032459	-	82	47.191	ENSAOCG00000006342	slirp	90	47.191	Amphiprion_ocellaris
ENSNLEG00000032459	-	82	47.191	ENSAPEG00000015917	slirp	90	47.191	Amphiprion_percula
ENSNLEG00000032459	-	82	47.191	ENSAPEG00000015719	-	91	47.191	Amphiprion_percula
ENSNLEG00000032459	-	73	51.471	ENSATEG00000013525	slirp	79	49.367	Anabas_testudineus
ENSNLEG00000032459	-	81	47.727	ENSAMXG00000018693	slirp	88	47.727	Astyanax_mexicanus
ENSNLEG00000032459	-	100	81.633	ENSCJAG00000016946	SLIRP	100	81.633	Callithrix_jacchus
ENSNLEG00000032459	-	95	72.727	ENSCAFG00020015876	-	100	67.568	Canis_lupus_dingo
ENSNLEG00000032459	-	100	79.839	ENSCCAG00000030130	SLIRP	100	79.839	Cebus_capucinus
ENSNLEG00000032459	-	99	84.783	ENSCATG00000036327	SLIRP	99	84.783	Cercocebus_atys
ENSNLEG00000032459	-	90	81.633	ENSCSAG00000011736	SLIRP	100	82.569	Chlorocebus_sabaeus
ENSNLEG00000032459	-	73	61.765	ENSCPBG00000026327	SLIRP	74	58.904	Chrysemys_picta_bellii
ENSNLEG00000032459	-	84	82.051	ENSCANG00000032892	SLIRP	100	80.612	Colobus_angolensis_palliatus
ENSNLEG00000032459	-	95	67.045	ENSCGRG00001024068	Slirp	100	58.559	Cricetulus_griseus_chok1gshd
ENSNLEG00000032459	-	95	67.045	ENSCGRG00000017440	Slirp	100	58.559	Cricetulus_griseus_crigri
ENSNLEG00000032459	-	92	48.837	ENSCSEG00000015766	slirp	85	46.739	Cynoglossus_semilaevis
ENSNLEG00000032459	-	73	58.824	ENSCVAG00000012504	slirp	69	57.143	Cyprinodon_variegatus
ENSNLEG00000032459	-	73	54.412	ENSDARG00000097753	slirp	90	48.485	Danio_rerio
ENSNLEG00000032459	-	81	67.416	ENSDNOG00000007721	SLIRP	100	62.727	Dasypus_novemcinctus
ENSNLEG00000032459	-	100	63.964	ENSDORG00000012379	Slirp	100	63.964	Dipodomys_ordii
ENSNLEG00000032459	-	90	67.347	ENSETEG00000010345	SLIRP	100	67.890	Echinops_telfairi
ENSNLEG00000032459	-	95	77.273	ENSEASG00005020193	SLIRP	100	72.072	Equus_asinus_asinus
ENSNLEG00000032459	-	92	59.406	ENSEEUG00000007257	SLIRP	100	59.406	Erinaceus_europaeus
ENSNLEG00000032459	-	72	49.254	ENSELUG00000016800	slirp	74	49.333	Esox_lucius
ENSNLEG00000032459	-	99	75.258	ENSFCAG00000036326	SLIRP	98	75.258	Felis_catus
ENSNLEG00000032459	-	73	55.882	ENSFALG00000012583	SLIRP	86	52.688	Ficedula_albicollis
ENSNLEG00000032459	-	95	63.441	ENSFDAG00000008347	SLIRP	100	60.177	Fukomys_damarensis
ENSNLEG00000032459	-	69	51.316	ENSFHEG00000004709	slirp	83	51.316	Fundulus_heteroclitus
ENSNLEG00000032459	-	81	44.318	ENSGMOG00000016948	slirp	84	44.318	Gadus_morhua
ENSNLEG00000032459	-	85	53.165	ENSGALG00000031238	SLIRP	89	54.023	Gallus_gallus
ENSNLEG00000032459	-	75	57.143	ENSGAFG00000010998	slirp	89	49.438	Gambusia_affinis
ENSNLEG00000032459	-	73	52.941	ENSGACG00000020137	slirp	98	46.429	Gasterosteus_aculeatus
ENSNLEG00000032459	-	82	57.143	ENSGAGG00000009953	SLIRP	63	57.143	Gopherus_agassizii
ENSNLEG00000032459	-	89	92.727	ENSGGOG00000011059	-	100	91.935	Gorilla_gorilla
ENSNLEG00000032459	-	100	56.757	ENSHGLG00000018491	SLIRP	100	56.757	Heterocephalus_glaber_female
ENSNLEG00000032459	-	100	56.757	ENSHGLG00100014153	SLIRP	100	56.757	Heterocephalus_glaber_male
ENSNLEG00000032459	-	81	52.809	ENSHCOG00000006795	slirp	90	52.809	Hippocampus_comes
ENSNLEG00000032459	-	81	46.591	ENSIPUG00000010214	SLIRP	88	46.591	Ictalurus_punctatus
ENSNLEG00000032459	-	90	64.000	ENSSTOG00000034316	SLIRP	100	66.667	Ictidomys_tridecemlineatus
ENSNLEG00000032459	-	78	41.111	ENSKMAG00000002038	slirp	87	41.111	Kryptolebias_marmoratus
ENSNLEG00000032459	-	82	43.820	ENSLBEG00000007564	slirp	89	43.820	Labrus_bergylta
ENSNLEG00000032459	-	82	47.778	ENSLACG00000013434	SLIRP	87	47.778	Latimeria_chalumnae
ENSNLEG00000032459	-	87	85.185	ENSMFAG00000042960	SLIRP	99	84.783	Macaca_fascicularis
ENSNLEG00000032459	-	87	85.185	ENSMMUG00000029256	SLIRP	99	85.870	Macaca_mulatta
ENSNLEG00000032459	-	87	85.185	ENSMNEG00000028921	SLIRP	99	84.783	Macaca_nemestrina
ENSNLEG00000032459	-	99	84.783	ENSMLEG00000043644	SLIRP	100	82.653	Mandrillus_leucophaeus
ENSNLEG00000032459	-	81	53.333	ENSMZEG00005004617	slirp	91	53.333	Maylandia_zebra
ENSNLEG00000032459	-	95	67.045	ENSMAUG00000003857	Slirp	100	60.360	Mesocricetus_auratus
ENSNLEG00000032459	-	95	76.136	ENSMICG00000012080	SLIRP	100	70.968	Microcebus_murinus
ENSNLEG00000032459	-	95	65.909	ENSMOCG00000016019	Slirp	96	62.963	Microtus_ochrogaster
ENSNLEG00000032459	-	79	50.000	ENSMMOG00000018268	slirp	88	50.000	Mola_mola
ENSNLEG00000032459	-	74	63.768	ENSMODG00000005207	-	100	61.972	Monodelphis_domestica
ENSNLEG00000032459	-	73	52.941	ENSMALG00000012581	slirp	77	53.333	Monopterus_albus
ENSNLEG00000032459	-	95	71.591	MGP_CAROLIEiJ_G0017995	Slirp	100	66.667	Mus_caroli
ENSNLEG00000032459	-	95	72.727	ENSMUSG00000021040	Slirp	96	67.593	Mus_musculus
ENSNLEG00000032459	-	95	72.727	MGP_SPRETEiJ_G0018840	Slirp	96	67.593	Mus_spretus
ENSNLEG00000032459	-	85	64.211	ENSMLUG00000024998	-	100	63.964	Myotis_lucifugus
ENSNLEG00000032459	-	90	62.000	ENSMLUG00000029544	-	100	62.162	Myotis_lucifugus
ENSNLEG00000032459	-	95	67.045	ENSNGAG00000016363	Slirp	100	65.741	Nannospalax_galili
ENSNLEG00000032459	-	96	73.034	ENSODEG00000012580	SLIRP	99	72.527	Octodon_degus
ENSNLEG00000032459	-	82	47.191	ENSONIG00000011692	slirp	90	47.191	Oreochromis_niloticus
ENSNLEG00000032459	-	95	60.227	ENSOANG00000022366	SLIRP	100	53.153	Ornithorhynchus_anatinus
ENSNLEG00000032459	-	81	48.889	ENSORLG00000010761	slirp	70	48.889	Oryzias_latipes
ENSNLEG00000032459	-	81	50.000	ENSORLG00020022188	slirp	90	50.000	Oryzias_latipes_hni
ENSNLEG00000032459	-	99	45.455	ENSORLG00015020171	slirp	100	45.455	Oryzias_latipes_hsok
ENSNLEG00000032459	-	81	50.000	ENSOMEG00000019321	slirp	90	50.000	Oryzias_melastigma
ENSNLEG00000032459	-	89	92.727	ENSPPAG00000040710	-	100	91.935	Pan_paniscus
ENSNLEG00000032459	-	99	76.289	ENSPPRG00000014350	SLIRP	98	76.289	Panthera_pardus
ENSNLEG00000032459	-	99	76.289	ENSPTIG00000014196	SLIRP	98	76.289	Panthera_tigris_altaica
ENSNLEG00000032459	-	89	92.727	ENSPTRG00000030691	SLIRP	100	91.935	Pan_troglodytes
ENSNLEG00000032459	-	99	84.783	ENSPANG00000026323	SLIRP	99	84.783	Papio_anubis
ENSNLEG00000032459	-	61	52.632	ENSPKIG00000008831	slirp	63	53.125	Paramormyrops_kingsleyae
ENSNLEG00000032459	-	73	63.235	ENSPMGG00000010541	slirp	89	57.143	Periophthalmus_magnuspinnatus
ENSNLEG00000032459	-	83	66.234	ENSPEMG00000013234	Slirp	97	57.576	Peromyscus_maniculatus_bairdii
ENSNLEG00000032459	-	65	50.000	ENSPMAG00000009355	slirp	76	48.529	Petromyzon_marinus
ENSNLEG00000032459	-	74	63.768	ENSPCIG00000026842	-	76	61.972	Phascolarctos_cinereus
ENSNLEG00000032459	-	82	49.438	ENSPFOG00000006758	slirp	89	49.438	Poecilia_formosa
ENSNLEG00000032459	-	82	49.438	ENSPLAG00000011140	slirp	89	49.438	Poecilia_latipinna
ENSNLEG00000032459	-	82	49.438	ENSPMEG00000019535	slirp	89	49.438	Poecilia_mexicana
ENSNLEG00000032459	-	82	49.438	ENSPREG00000011673	slirp	89	49.438	Poecilia_reticulata
ENSNLEG00000032459	-	90	80.612	ENSPPYG00000006030	SLIRP	100	80.734	Pongo_abelii
ENSNLEG00000032459	-	100	69.355	ENSPCOG00000015159	SLIRP	100	69.355	Propithecus_coquereli
ENSNLEG00000032459	-	81	52.809	ENSPNAG00000008633	slirp	90	52.809	Pygocentrus_nattereri
ENSNLEG00000032459	-	87	73.684	ENSRBIG00000035817	-	100	75.472	Rhinopithecus_bieti
ENSNLEG00000032459	-	87	76.744	ENSRBIG00000032998	-	90	78.351	Rhinopithecus_bieti
ENSNLEG00000032459	-	88	75.610	ENSRBIG00000031396	-	93	77.419	Rhinopithecus_bieti
ENSNLEG00000032459	-	87	83.951	ENSRBIG00000032222	-	99	84.783	Rhinopithecus_bieti
ENSNLEG00000032459	-	87	82.716	ENSRROG00000036656	-	99	83.696	Rhinopithecus_roxellana
ENSNLEG00000032459	-	87	79.762	ENSRROG00000017133	-	99	81.053	Rhinopithecus_roxellana
ENSNLEG00000032459	-	88	74.390	ENSRROG00000035604	-	93	76.344	Rhinopithecus_roxellana
ENSNLEG00000032459	-	83	80.519	ENSRROG00000041312	-	91	80.435	Rhinopithecus_roxellana
ENSNLEG00000032459	-	100	80.645	ENSSBOG00000020014	SLIRP	99	80.645	Saimiri_boliviensis_boliviensis
ENSNLEG00000032459	-	73	57.353	ENSSFOG00015011165	slirp	72	57.746	Scleropages_formosus
ENSNLEG00000032459	-	81	41.304	ENSSMAG00000012930	slirp	90	41.304	Scophthalmus_maximus
ENSNLEG00000032459	-	73	55.882	ENSSDUG00000021883	slirp	55	50.000	Seriola_dumerili
ENSNLEG00000032459	-	86	50.588	ENSSLDG00000023136	slirp	91	46.535	Seriola_lalandi_dorsalis
ENSNLEG00000032459	-	73	60.294	ENSSPUG00000009346	SLIRP	77	58.667	Sphenodon_punctatus
ENSNLEG00000032459	-	73	51.471	ENSSPAG00000013477	slirp	75	53.333	Stegastes_partitus
ENSNLEG00000032459	-	95	76.136	ENSSSCG00000028167	SLIRP	100	70.270	Sus_scrofa
ENSNLEG00000032459	-	73	57.353	ENSTGUG00000012337	SLIRP	86	53.763	Taeniopygia_guttata
ENSNLEG00000032459	-	92	42.529	ENSTRUG00000020127	slirp	75	50.000	Takifugu_rubripes
ENSNLEG00000032459	-	95	77.273	ENSUAMG00000022445	SLIRP	100	71.171	Ursus_americanus
ENSNLEG00000032459	-	95	77.273	ENSUMAG00000007166	SLIRP	100	72.072	Ursus_maritimus
ENSNLEG00000032459	-	100	68.807	ENSVPAG00000001781	SLIRP	100	68.807	Vicugna_pacos
ENSNLEG00000032459	-	84	73.077	ENSVVUG00000004436	SLIRP	100	68.468	Vulpes_vulpes
ENSNLEG00000032459	-	73	57.353	ENSXETG00000030343	SLIRP	81	55.556	Xenopus_tropicalis
ENSNLEG00000032459	-	75	57.143	ENSXCOG00000009422	slirp	89	49.438	Xiphophorus_couchianus
ENSNLEG00000032459	-	75	58.571	ENSXMAG00000015655	slirp	89	50.562	Xiphophorus_maculatus