EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000033754 (Gene tree)
Gene ID: 100593035
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 372 bases
Position: chr12:5735297-5735668
Accession: 100593035
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000048118	LSM	PF01423.22	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000050546	LSM10-201	372	XM_003273279	ENSNLEP00000048118	123 (aa)	XP_003273327	A0A2I3HX03

Gene Model

Click here to download ENSNLEG00000033754's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000033754's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000033754	LSM10	55	30.000	ENSNLEG00000035542	LSM2	74	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000033754	LSM10	100	98.374	ENSG00000181817	LSM10	100	98.374	Homo_sapiens
ENSNLEG00000033754	LSM10	100	90.244	ENSAMEG00000019854	LSM10	100	90.244	Ailuropoda_melanoleuca
ENSNLEG00000033754	LSM10	95	66.667	ENSACIG00000015420	oscp1a	77	66.667	Amphilophus_citrinellus
ENSNLEG00000033754	LSM10	96	67.797	ENSAOCG00000014654	-	98	67.797	Amphiprion_ocellaris
ENSNLEG00000033754	LSM10	90	65.766	ENSAOCG00000015607	LSM10	86	65.766	Amphiprion_ocellaris
ENSNLEG00000033754	LSM10	96	67.797	ENSAOCG00000015618	LSM10	98	67.797	Amphiprion_ocellaris
ENSNLEG00000033754	LSM10	96	67.797	ENSAPEG00000021845	-	98	67.797	Amphiprion_percula
ENSNLEG00000033754	LSM10	90	65.766	ENSAPEG00000021851	LSM10	86	65.766	Amphiprion_percula
ENSNLEG00000033754	LSM10	99	60.656	ENSATEG00000006310	oscp1a	88	60.656	Anabas_testudineus
ENSNLEG00000033754	LSM10	100	67.480	ENSACAG00000001231	LSM10	100	67.480	Anolis_carolinensis
ENSNLEG00000033754	LSM10	100	97.561	ENSANAG00000018759	-	100	97.561	Aotus_nancymaae
ENSNLEG00000033754	LSM10	99	95.902	ENSANAG00000031489	-	100	95.902	Aotus_nancymaae
ENSNLEG00000033754	LSM10	96	66.102	ENSACLG00000004728	oscp1a	96	66.102	Astatotilapia_calliptera
ENSNLEG00000033754	LSM10	96	66.949	ENSAMXG00000025301	oscp1a	98	66.949	Astyanax_mexicanus
ENSNLEG00000033754	LSM10	99	91.803	ENSBTAG00000024096	LSM10	100	91.803	Bos_taurus
ENSNLEG00000033754	LSM10	100	96.748	ENSCJAG00000044880	LSM10	100	96.748	Callithrix_jacchus
ENSNLEG00000033754	LSM10	100	92.683	ENSCAFG00000003382	LSM10	100	92.683	Canis_familiaris
ENSNLEG00000033754	LSM10	100	92.683	ENSCAFG00020008920	LSM10	100	92.683	Canis_lupus_dingo
ENSNLEG00000033754	LSM10	99	91.803	ENSCHIG00000009398	LSM10	100	91.803	Capra_hircus
ENSNLEG00000033754	LSM10	100	92.683	ENSCAPG00000012567	LSM10	100	92.683	Cavia_aperea
ENSNLEG00000033754	LSM10	100	92.683	ENSCPOG00000039302	LSM10	100	92.683	Cavia_porcellus
ENSNLEG00000033754	LSM10	99	94.262	ENSCCAG00000008378	-	99	94.262	Cebus_capucinus
ENSNLEG00000033754	LSM10	100	97.561	ENSCCAG00000018913	-	100	97.561	Cebus_capucinus
ENSNLEG00000033754	LSM10	100	97.561	ENSCATG00000006589	LSM10	100	97.561	Cercocebus_atys
ENSNLEG00000033754	LSM10	100	94.309	ENSCLAG00000008633	LSM10	100	94.309	Chinchilla_lanigera
ENSNLEG00000033754	LSM10	100	97.561	ENSCSAG00000000134	LSM10	100	97.561	Chlorocebus_sabaeus
ENSNLEG00000033754	LSM10	100	93.600	ENSCHOG00000008615	LSM10	100	93.600	Choloepus_hoffmanni
ENSNLEG00000033754	LSM10	83	32.353	ENSCSAVG00000001896	-	87	32.353	Ciona_savignyi
ENSNLEG00000033754	LSM10	100	97.561	ENSCANG00000019928	LSM10	100	97.561	Colobus_angolensis_palliatus
ENSNLEG00000033754	LSM10	93	82.759	ENSCGRG00001022673	-	93	82.759	Cricetulus_griseus_chok1gshd
ENSNLEG00000033754	LSM10	99	90.984	ENSCGRG00001004317	-	100	90.984	Cricetulus_griseus_chok1gshd
ENSNLEG00000033754	LSM10	93	82.759	ENSCGRG00000015514	-	93	82.759	Cricetulus_griseus_crigri
ENSNLEG00000033754	LSM10	99	90.984	ENSCGRG00000014935	-	100	90.984	Cricetulus_griseus_crigri
ENSNLEG00000033754	LSM10	98	61.983	ENSCSEG00000010374	oscp1a	81	61.983	Cynoglossus_semilaevis
ENSNLEG00000033754	LSM10	98	64.167	ENSCVAG00000001536	oscp1a	91	64.167	Cyprinodon_variegatus
ENSNLEG00000033754	LSM10	98	70.000	ENSDARG00000101222	oscp1a	99	70.000	Danio_rerio
ENSNLEG00000033754	LSM10	69	69.412	ENSDARG00000109563	CABZ01074453.1	99	69.412	Danio_rerio
ENSNLEG00000033754	LSM10	98	94.215	ENSDNOG00000036662	LSM10	98	94.215	Dasypus_novemcinctus
ENSNLEG00000033754	LSM10	100	92.683	ENSDORG00000007579	Lsm10	100	92.683	Dipodomys_ordii
ENSNLEG00000033754	LSM10	85	31.193	FBgn0033554	Lsm10	77	31.193	Drosophila_melanogaster
ENSNLEG00000033754	LSM10	100	88.618	ENSETEG00000005703	LSM10	100	88.618	Echinops_telfairi
ENSNLEG00000033754	LSM10	95	52.991	ENSEBUG00000001312	oscp1a	96	52.991	Eptatretus_burgeri
ENSNLEG00000033754	LSM10	100	92.683	ENSEASG00005012194	LSM10	100	92.683	Equus_asinus_asinus
ENSNLEG00000033754	LSM10	100	93.496	ENSECAG00000005071	LSM10	100	93.496	Equus_caballus
ENSNLEG00000033754	LSM10	100	91.057	ENSEEUG00000012032	LSM10	100	91.057	Erinaceus_europaeus
ENSNLEG00000033754	LSM10	98	67.500	ENSELUG00000007452	oscp1a	98	67.500	Esox_lucius
ENSNLEG00000033754	LSM10	95	72.650	ENSFALG00000000851	LSM10	95	72.650	Ficedula_albicollis
ENSNLEG00000033754	LSM10	100	90.244	ENSFDAG00000021056	LSM10	100	90.244	Fukomys_damarensis
ENSNLEG00000033754	LSM10	89	66.364	ENSFHEG00000001058	oscp1a	95	66.364	Fundulus_heteroclitus
ENSNLEG00000033754	LSM10	87	64.486	ENSGMOG00000019832	oscp1a	90	64.486	Gadus_morhua
ENSNLEG00000033754	LSM10	100	72.358	ENSGALG00000002127	LSM10	100	72.358	Gallus_gallus
ENSNLEG00000033754	LSM10	96	57.851	ENSGAFG00000016445	oscp1a	95	57.851	Gambusia_affinis
ENSNLEG00000033754	LSM10	96	63.559	ENSGACG00000002329	oscp1a	97	63.559	Gasterosteus_aculeatus
ENSNLEG00000033754	LSM10	100	72.358	ENSGAGG00000024848	LSM10	100	72.358	Gopherus_agassizii
ENSNLEG00000033754	LSM10	100	98.374	ENSGGOG00000003556	LSM10	100	98.374	Gorilla_gorilla
ENSNLEG00000033754	LSM10	96	66.102	ENSHBUG00000001722	oscp1a	96	66.102	Haplochromis_burtoni
ENSNLEG00000033754	LSM10	100	91.870	ENSHGLG00000011625	LSM10	100	91.870	Heterocephalus_glaber_female
ENSNLEG00000033754	LSM10	100	91.870	ENSHGLG00100001769	LSM10	100	91.870	Heterocephalus_glaber_male
ENSNLEG00000033754	LSM10	85	67.619	ENSIPUG00000005808	oscp1a	91	67.619	Ictalurus_punctatus
ENSNLEG00000033754	LSM10	100	91.870	ENSSTOG00000000606	LSM10	100	91.870	Ictidomys_tridecemlineatus
ENSNLEG00000033754	LSM10	96	63.559	ENSKMAG00000012143	oscp1a	98	63.559	Kryptolebias_marmoratus
ENSNLEG00000033754	LSM10	98	62.500	ENSLBEG00000017764	oscp1a	98	62.500	Labrus_bergylta
ENSNLEG00000033754	LSM10	100	73.171	ENSLACG00000015904	LSM10	95	73.171	Latimeria_chalumnae
ENSNLEG00000033754	LSM10	98	70.833	ENSLOCG00000018277	oscp1a	98	70.833	Lepisosteus_oculatus
ENSNLEG00000033754	LSM10	100	92.683	ENSLAFG00000009600	LSM10	100	92.683	Loxodonta_africana
ENSNLEG00000033754	LSM10	100	97.561	ENSMFAG00000009115	LSM10	100	97.561	Macaca_fascicularis
ENSNLEG00000033754	LSM10	100	97.561	ENSMMUG00000017338	LSM10	100	97.561	Macaca_mulatta
ENSNLEG00000033754	LSM10	100	97.561	ENSMNEG00000020023	LSM10	100	97.561	Macaca_nemestrina
ENSNLEG00000033754	LSM10	100	97.561	ENSMLEG00000025150	LSM10	100	97.561	Mandrillus_leucophaeus
ENSNLEG00000033754	LSM10	98	64.463	ENSMAMG00000004427	oscp1a	99	64.463	Mastacembelus_armatus
ENSNLEG00000033754	LSM10	96	66.102	ENSMZEG00005026307	oscp1a	96	66.102	Maylandia_zebra
ENSNLEG00000033754	LSM10	100	71.545	ENSMGAG00000015707	LSM10	100	71.545	Meleagris_gallopavo
ENSNLEG00000033754	LSM10	98	92.500	ENSMAUG00000016624	Lsm10	98	92.500	Mesocricetus_auratus
ENSNLEG00000033754	LSM10	98	92.500	ENSMOCG00000021943	Lsm10	98	92.500	Microtus_ochrogaster
ENSNLEG00000033754	LSM10	90	66.667	ENSMMOG00000013597	oscp1a	83	66.667	Mola_mola
ENSNLEG00000033754	LSM10	100	81.301	ENSMODG00000023328	LSM10	100	81.301	Monodelphis_domestica
ENSNLEG00000033754	LSM10	58	57.895	ENSMALG00000012661	oscp1a	60	57.895	Monopterus_albus
ENSNLEG00000033754	LSM10	98	91.667	MGP_CAROLIEiJ_G0026467	Lsm10	100	90.323	Mus_caroli
ENSNLEG00000033754	LSM10	98	92.500	ENSMUSG00000050188	Lsm10	100	91.398	Mus_musculus
ENSNLEG00000033754	LSM10	98	92.500	MGP_PahariEiJ_G0028798	Lsm10	100	91.398	Mus_pahari
ENSNLEG00000033754	LSM10	98	92.500	MGP_SPRETEiJ_G0027446	Lsm10	100	91.398	Mus_spretus
ENSNLEG00000033754	LSM10	100	92.683	ENSMPUG00000018593	LSM10	100	92.683	Mustela_putorius_furo
ENSNLEG00000033754	LSM10	100	89.431	ENSMLUG00000023895	LSM10	100	89.431	Myotis_lucifugus
ENSNLEG00000033754	LSM10	100	92.683	ENSNGAG00000015011	Lsm10	100	92.683	Nannospalax_galili
ENSNLEG00000033754	LSM10	96	66.949	ENSNBRG00000014306	oscp1a	96	66.949	Neolamprologus_brichardi
ENSNLEG00000033754	LSM10	100	81.301	ENSMEUG00000006313	LSM10	100	81.301	Notamacropus_eugenii
ENSNLEG00000033754	LSM10	100	91.870	ENSOPRG00000001699	LSM10	100	91.870	Ochotona_princeps
ENSNLEG00000033754	LSM10	100	94.309	ENSODEG00000019161	LSM10	100	94.309	Octodon_degus
ENSNLEG00000033754	LSM10	96	66.949	ENSONIG00000020904	oscp1a	97	66.949	Oreochromis_niloticus
ENSNLEG00000033754	LSM10	100	73.984	ENSOANG00000002066	LSM10	100	73.984	Ornithorhynchus_anatinus
ENSNLEG00000033754	LSM10	100	91.057	ENSOCUG00000005333	LSM10	100	91.057	Oryctolagus_cuniculus
ENSNLEG00000033754	LSM10	96	65.254	ENSORLG00000009504	oscp1a	98	65.254	Oryzias_latipes
ENSNLEG00000033754	LSM10	96	65.254	ENSORLG00020016201	oscp1a	98	65.254	Oryzias_latipes_hni
ENSNLEG00000033754	LSM10	96	65.254	ENSORLG00015007794	oscp1a	97	65.254	Oryzias_latipes_hsok
ENSNLEG00000033754	LSM10	100	91.057	ENSOGAG00000002653	LSM10	100	91.057	Otolemur_garnettii
ENSNLEG00000033754	LSM10	99	91.803	ENSOARG00000009596	LSM10	100	91.803	Ovis_aries
ENSNLEG00000033754	LSM10	100	98.374	ENSPPAG00000023465	LSM10	100	98.374	Pan_paniscus
ENSNLEG00000033754	LSM10	100	93.496	ENSPPRG00000014619	LSM10	100	93.496	Panthera_pardus
ENSNLEG00000033754	LSM10	100	93.496	ENSPTIG00000004613	LSM10	100	93.496	Panthera_tigris_altaica
ENSNLEG00000033754	LSM10	100	98.374	ENSPTRG00000000539	LSM10	100	98.374	Pan_troglodytes
ENSNLEG00000033754	LSM10	100	97.561	ENSPANG00000023172	LSM10	100	97.561	Papio_anubis
ENSNLEG00000033754	LSM10	100	63.415	ENSPKIG00000003728	oscp1a	99	63.415	Paramormyrops_kingsleyae
ENSNLEG00000033754	LSM10	100	70.732	ENSPSIG00000000590	LSM10	100	70.732	Pelodiscus_sinensis
ENSNLEG00000033754	LSM10	62	64.474	ENSPMGG00000015718	oscp1a	99	64.474	Periophthalmus_magnuspinnatus
ENSNLEG00000033754	LSM10	84	85.437	ENSPCIG00000014865	LSM10	76	85.437	Phascolarctos_cinereus
ENSNLEG00000033754	LSM10	91	66.071	ENSPFOG00000020490	oscp1a	95	66.071	Poecilia_formosa
ENSNLEG00000033754	LSM10	96	64.407	ENSPLAG00000016537	oscp1a	89	64.407	Poecilia_latipinna
ENSNLEG00000033754	LSM10	93	65.789	ENSPMEG00000000174	oscp1a	98	65.789	Poecilia_mexicana
ENSNLEG00000033754	LSM10	96	64.407	ENSPREG00000009899	oscp1a	89	64.407	Poecilia_reticulata
ENSNLEG00000033754	LSM10	100	99.187	ENSPPYG00000001539	LSM10	100	99.187	Pongo_abelii
ENSNLEG00000033754	LSM10	100	91.870	ENSPCAG00000002520	LSM10	100	91.870	Procavia_capensis
ENSNLEG00000033754	LSM10	100	91.870	ENSPVAG00000008644	LSM10	100	91.870	Pteropus_vampyrus
ENSNLEG00000033754	LSM10	96	66.102	ENSPNYG00000003138	oscp1a	96	66.102	Pundamilia_nyererei
ENSNLEG00000033754	LSM10	95	65.812	ENSPNAG00000028829	oscp1a	97	65.812	Pygocentrus_nattereri
ENSNLEG00000033754	LSM10	98	93.333	ENSRNOG00000025716	Lsm10	98	93.333	Rattus_norvegicus
ENSNLEG00000033754	LSM10	100	97.561	ENSRBIG00000001561	LSM10	100	97.561	Rhinopithecus_bieti
ENSNLEG00000033754	LSM10	100	97.561	ENSRROG00000011414	LSM10	100	97.561	Rhinopithecus_roxellana
ENSNLEG00000033754	LSM10	100	97.561	ENSSBOG00000036413	-	100	97.561	Saimiri_boliviensis_boliviensis
ENSNLEG00000033754	LSM10	100	80.488	ENSSHAG00000018056	LSM10	100	80.488	Sarcophilus_harrisii
ENSNLEG00000033754	LSM10	99	63.934	ENSSFOG00015019954	lsm10	100	63.934	Scleropages_formosus
ENSNLEG00000033754	LSM10	93	65.217	ENSSMAG00000001297	oscp1a	98	65.217	Scophthalmus_maximus
ENSNLEG00000033754	LSM10	98	63.115	ENSSDUG00000007090	oscp1a	99	63.115	Seriola_dumerili
ENSNLEG00000033754	LSM10	95	64.103	ENSSLDG00000000800	oscp1a	97	64.103	Seriola_lalandi_dorsalis
ENSNLEG00000033754	LSM10	100	89.600	ENSSARG00000004211	LSM10	100	91.200	Sorex_araneus
ENSNLEG00000033754	LSM10	94	65.517	ENSSPAG00000009229	oscp1a	96	65.517	Stegastes_partitus
ENSNLEG00000033754	LSM10	100	90.244	ENSSSCG00000038916	LSM10	100	90.244	Sus_scrofa
ENSNLEG00000033754	LSM10	96	72.881	ENSTGUG00000001600	-	97	72.881	Taeniopygia_guttata
ENSNLEG00000033754	LSM10	96	72.881	ENSTGUG00000001602	-	97	72.881	Taeniopygia_guttata
ENSNLEG00000033754	LSM10	96	66.102	ENSTRUG00000010531	oscp1a	95	66.102	Takifugu_rubripes
ENSNLEG00000033754	LSM10	100	93.496	ENSTBEG00000016674	LSM10	100	93.496	Tupaia_belangeri
ENSNLEG00000033754	LSM10	100	90.244	ENSUAMG00000020265	LSM10	100	90.244	Ursus_americanus
ENSNLEG00000033754	LSM10	100	90.244	ENSUMAG00000001438	LSM10	57	90.244	Ursus_maritimus
ENSNLEG00000033754	LSM10	100	92.683	ENSVVUG00000023209	LSM10	100	92.683	Vulpes_vulpes
ENSNLEG00000033754	LSM10	100	70.732	ENSXETG00000027631	lsm10	100	70.732	Xenopus_tropicalis
ENSNLEG00000033754	LSM10	97	61.345	ENSXCOG00000018776	oscp1a	75	61.345	Xiphophorus_couchianus
ENSNLEG00000033754	LSM10	100	60.317	ENSXMAG00000019963	oscp1a	98	60.317	Xiphophorus_maculatus