EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000034172 (Gene tree)
Gene ID: 100586365
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 382745 bases
Position: chr21:21480981-21863725
Accession: 100586365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000034995	CMS1	PF14617.6	4.5e-33	1	1
ENSNLEP00000037486	CMS1	PF14617.6	5.7e-33	1	1
ENSNLEP00000034995	DEAD	PF00270.29	6.4e-06	1	1
ENSNLEP00000037486	DEAD	PF00270.29	7.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000041103	CMSS1-201	1084	XM_003261728	ENSNLEP00000034995	261 (aa)	XP_003261776	A0A2I3GUT9
ENSNLET00000041579	CMSS1-202	840	XM_003261727	ENSNLEP00000037486	279 (aa)	XP_003261775	A0A2I3H1R9

Gene Model

Click here to download ENSNLEG00000034172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000034172's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000034172	CMSS1	100	97.491	ENSG00000184220	CMSS1	100	100.000	Homo_sapiens
ENSNLEG00000034172	CMSS1	77	64.851	ENSAPOG00000010604	cmss1	98	59.504	Acanthochromis_polyacanthus
ENSNLEG00000034172	CMSS1	99	91.120	ENSAMEG00000004092	CMSS1	100	91.120	Ailuropoda_melanoleuca
ENSNLEG00000034172	CMSS1	77	54.455	ENSACIG00000021854	cmss1	74	54.000	Amphilophus_citrinellus
ENSNLEG00000034172	CMSS1	100	51.195	ENSAOCG00000013361	cmss1	100	53.512	Amphiprion_ocellaris
ENSNLEG00000034172	CMSS1	77	64.851	ENSAPEG00000005829	cmss1	100	53.000	Amphiprion_percula
ENSNLEG00000034172	CMSS1	100	53.535	ENSATEG00000008209	cmss1	100	53.767	Anabas_testudineus
ENSNLEG00000034172	CMSS1	88	70.000	ENSAPLG00000010542	CMSS1	100	70.000	Anas_platyrhynchos
ENSNLEG00000034172	CMSS1	99	62.687	ENSACAG00000011065	CMSS1	98	62.687	Anolis_carolinensis
ENSNLEG00000034172	CMSS1	100	94.643	ENSANAG00000023565	CMSS1	100	94.643	Aotus_nancymaae
ENSNLEG00000034172	CMSS1	100	49.342	ENSACLG00000027294	cmss1	100	50.000	Astatotilapia_calliptera
ENSNLEG00000034172	CMSS1	100	45.973	ENSAMXG00000002046	cmss1	100	47.297	Astyanax_mexicanus
ENSNLEG00000034172	CMSS1	100	88.889	ENSBTAG00000013663	CMSS1	100	88.889	Bos_taurus
ENSNLEG00000034172	CMSS1	100	94.643	ENSCJAG00000000610	CMSS1	100	94.643	Callithrix_jacchus
ENSNLEG00000034172	CMSS1	100	91.954	ENSCAFG00000009230	CMSS1	95	91.954	Canis_familiaris
ENSNLEG00000034172	CMSS1	98	92.607	ENSCAFG00020009464	-	95	92.278	Canis_lupus_dingo
ENSNLEG00000034172	CMSS1	89	85.776	ENSCAFG00020024156	-	76	82.041	Canis_lupus_dingo
ENSNLEG00000034172	CMSS1	98	90.272	ENSCHIG00000013003	CMSS1	93	90.272	Capra_hircus
ENSNLEG00000034172	CMSS1	99	91.120	ENSTSYG00000009266	CMSS1	99	91.120	Carlito_syrichta
ENSNLEG00000034172	CMSS1	85	73.799	ENSCAPG00000013584	CMSS1	100	74.236	Cavia_aperea
ENSNLEG00000034172	CMSS1	100	87.814	ENSCPOG00000014680	CMSS1	100	87.814	Cavia_porcellus
ENSNLEG00000034172	CMSS1	100	96.071	ENSCCAG00000034685	CMSS1	100	96.071	Cebus_capucinus
ENSNLEG00000034172	CMSS1	100	98.467	ENSCATG00000031980	CMSS1	100	98.467	Cercocebus_atys
ENSNLEG00000034172	CMSS1	88	95.197	ENSCLAG00000011241	CMSS1	98	95.197	Chinchilla_lanigera
ENSNLEG00000034172	CMSS1	94	98.367	ENSCSAG00000006024	CMSS1	100	98.367	Chlorocebus_sabaeus
ENSNLEG00000034172	CMSS1	100	70.251	ENSCHOG00000012098	CMSS1	100	70.251	Choloepus_hoffmanni
ENSNLEG00000034172	CMSS1	72	41.327	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSNLEG00000034172	CMSS1	100	97.491	ENSCANG00000031337	CMSS1	100	97.491	Colobus_angolensis_palliatus
ENSNLEG00000034172	CMSS1	100	82.437	ENSCGRG00001014305	Cmss1	100	82.437	Cricetulus_griseus_chok1gshd
ENSNLEG00000034172	CMSS1	98	83.203	ENSCGRG00000006722	Cmss1	99	83.203	Cricetulus_griseus_crigri
ENSNLEG00000034172	CMSS1	100	50.505	ENSCSEG00000004958	cmss1	100	51.316	Cynoglossus_semilaevis
ENSNLEG00000034172	CMSS1	100	51.557	ENSCVAG00000005039	cmss1	100	52.921	Cyprinodon_variegatus
ENSNLEG00000034172	CMSS1	100	46.465	ENSDARG00000112579	cmss1	100	47.260	Danio_rerio
ENSNLEG00000034172	CMSS1	100	86.641	ENSDNOG00000040418	CMSS1	92	87.645	Dasypus_novemcinctus
ENSNLEG00000034172	CMSS1	100	88.530	ENSDORG00000010461	Cmss1	100	88.530	Dipodomys_ordii
ENSNLEG00000034172	CMSS1	51	50.000	ENSEBUG00000002156	-	96	50.000	Eptatretus_burgeri
ENSNLEG00000034172	CMSS1	99	85.000	ENSEASG00005010966	CMSS1	99	94.064	Equus_asinus_asinus
ENSNLEG00000034172	CMSS1	98	91.051	ENSECAG00000015662	CMSS1	99	93.363	Equus_caballus
ENSNLEG00000034172	CMSS1	100	56.989	ENSEEUG00000007624	-	100	56.989	Erinaceus_europaeus
ENSNLEG00000034172	CMSS1	91	58.333	ENSELUG00000019459	cmss1	100	52.000	Esox_lucius
ENSNLEG00000034172	CMSS1	100	93.907	ENSFCAG00000044577	CMSS1	100	93.907	Felis_catus
ENSNLEG00000034172	CMSS1	91	64.979	ENSFALG00000005816	CMSS1	100	64.979	Ficedula_albicollis
ENSNLEG00000034172	CMSS1	87	92.105	ENSFDAG00000012577	CMSS1	100	92.105	Fukomys_damarensis
ENSNLEG00000034172	CMSS1	87	60.606	ENSFHEG00000012008	cmss1	95	60.606	Fundulus_heteroclitus
ENSNLEG00000034172	CMSS1	99	51.203	ENSGMOG00000016729	cmss1	100	52.778	Gadus_morhua
ENSNLEG00000034172	CMSS1	100	63.396	ENSGALG00000015267	CMSS1	100	63.740	Gallus_gallus
ENSNLEG00000034172	CMSS1	79	63.768	ENSGAFG00000021217	cmss1	76	63.500	Gambusia_affinis
ENSNLEG00000034172	CMSS1	99	48.227	ENSGACG00000002798	cmss1	100	49.104	Gasterosteus_aculeatus
ENSNLEG00000034172	CMSS1	100	63.441	ENSGAGG00000019861	CMSS1	100	63.441	Gopherus_agassizii
ENSNLEG00000034172	CMSS1	100	98.467	ENSGGOG00000014125	CMSS1	100	98.467	Gorilla_gorilla
ENSNLEG00000034172	CMSS1	100	49.505	ENSHBUG00000008431	cmss1	100	50.345	Haplochromis_burtoni
ENSNLEG00000034172	CMSS1	97	86.561	ENSHGLG00000019481	CMSS1	100	86.561	Heterocephalus_glaber_female
ENSNLEG00000034172	CMSS1	98	86.770	ENSHGLG00100010314	CMSS1	100	86.770	Heterocephalus_glaber_male
ENSNLEG00000034172	CMSS1	100	53.378	ENSHCOG00000003222	cmss1	100	54.392	Hippocampus_comes
ENSNLEG00000034172	CMSS1	100	48.276	ENSIPUG00000011591	cmss1	100	48.630	Ictalurus_punctatus
ENSNLEG00000034172	CMSS1	100	91.398	ENSSTOG00000019366	CMSS1	100	91.398	Ictidomys_tridecemlineatus
ENSNLEG00000034172	CMSS1	100	84.588	ENSJJAG00000014894	Cmss1	100	84.588	Jaculus_jaculus
ENSNLEG00000034172	CMSS1	77	54.455	ENSKMAG00000002390	cmss1	80	54.000	Kryptolebias_marmoratus
ENSNLEG00000034172	CMSS1	85	53.333	ENSLBEG00000006298	cmss1	82	58.706	Labrus_bergylta
ENSNLEG00000034172	CMSS1	87	64.783	ENSLACG00000009293	CMSS1	100	64.783	Latimeria_chalumnae
ENSNLEG00000034172	CMSS1	100	51.056	ENSLOCG00000009391	cmss1	100	51.761	Lepisosteus_oculatus
ENSNLEG00000034172	CMSS1	87	92.105	ENSLAFG00000017509	CMSS1	100	92.105	Loxodonta_africana
ENSNLEG00000034172	CMSS1	100	98.851	ENSMFAG00000045006	CMSS1	100	98.851	Macaca_fascicularis
ENSNLEG00000034172	CMSS1	100	98.467	ENSMMUG00000002939	CMSS1	100	98.467	Macaca_mulatta
ENSNLEG00000034172	CMSS1	100	98.467	ENSMNEG00000031315	CMSS1	100	98.467	Macaca_nemestrina
ENSNLEG00000034172	CMSS1	100	98.084	ENSMLEG00000033660	CMSS1	100	98.084	Mandrillus_leucophaeus
ENSNLEG00000034172	CMSS1	100	52.303	ENSMAMG00000017176	cmss1	100	53.242	Mastacembelus_armatus
ENSNLEG00000034172	CMSS1	100	49.342	ENSMZEG00005021886	cmss1	100	50.000	Maylandia_zebra
ENSNLEG00000034172	CMSS1	87	68.421	ENSMGAG00000014360	CMSS1	100	68.421	Meleagris_gallopavo
ENSNLEG00000034172	CMSS1	100	60.573	ENSMAUG00000020609	Cmss1	100	60.573	Mesocricetus_auratus
ENSNLEG00000034172	CMSS1	100	93.190	ENSMICG00000048977	CMSS1	100	93.190	Microcebus_murinus
ENSNLEG00000034172	CMSS1	100	82.796	ENSMOCG00000021937	Cmss1	100	82.796	Microtus_ochrogaster
ENSNLEG00000034172	CMSS1	85	58.696	ENSMMOG00000019794	cmss1	95	57.940	Mola_mola
ENSNLEG00000034172	CMSS1	97	75.197	ENSMODG00000002275	CMSS1	98	73.282	Monodelphis_domestica
ENSNLEG00000034172	CMSS1	100	53.425	ENSMALG00000004250	cmss1	100	52.577	Monopterus_albus
ENSNLEG00000034172	CMSS1	100	82.857	MGP_CAROLIEiJ_G0020824	Cmss1	100	82.857	Mus_caroli
ENSNLEG00000034172	CMSS1	100	83.571	ENSMUSG00000022748	Cmss1	100	83.571	Mus_musculus
ENSNLEG00000034172	CMSS1	100	82.143	MGP_PahariEiJ_G0016524	Cmss1	100	82.143	Mus_pahari
ENSNLEG00000034172	CMSS1	100	82.857	MGP_SPRETEiJ_G0021724	Cmss1	100	82.857	Mus_spretus
ENSNLEG00000034172	CMSS1	99	93.846	ENSMPUG00000011324	CMSS1	100	93.846	Mustela_putorius_furo
ENSNLEG00000034172	CMSS1	99	92.720	ENSMLUG00000001131	CMSS1	99	93.077	Myotis_lucifugus
ENSNLEG00000034172	CMSS1	99	87.209	ENSNGAG00000020316	Cmss1	100	86.022	Nannospalax_galili
ENSNLEG00000034172	CMSS1	100	49.013	ENSNBRG00000003095	cmss1	100	50.515	Neolamprologus_brichardi
ENSNLEG00000034172	CMSS1	87	67.544	ENSMEUG00000014505	CMSS1	100	67.544	Notamacropus_eugenii
ENSNLEG00000034172	CMSS1	100	92.115	ENSOPRG00000002986	CMSS1	100	92.115	Ochotona_princeps
ENSNLEG00000034172	CMSS1	100	87.097	ENSODEG00000005226	-	100	87.097	Octodon_degus
ENSNLEG00000034172	CMSS1	100	75.986	ENSODEG00000001853	-	100	75.986	Octodon_degus
ENSNLEG00000034172	CMSS1	100	71.326	ENSODEG00000009446	-	100	71.326	Octodon_degus
ENSNLEG00000034172	CMSS1	100	82.206	ENSODEG00000003558	-	100	82.206	Octodon_degus
ENSNLEG00000034172	CMSS1	77	61.386	ENSONIG00000006678	cmss1	77	61.000	Oreochromis_niloticus
ENSNLEG00000034172	CMSS1	98	72.692	ENSOANG00000007529	CMSS1	100	74.678	Ornithorhynchus_anatinus
ENSNLEG00000034172	CMSS1	100	91.954	ENSOCUG00000025366	CMSS1	95	91.954	Oryctolagus_cuniculus
ENSNLEG00000034172	CMSS1	100	53.082	ENSORLG00000020340	cmss1	100	53.082	Oryzias_latipes
ENSNLEG00000034172	CMSS1	88	55.459	ENSORLG00020012235	cmss1	99	54.936	Oryzias_latipes_hni
ENSNLEG00000034172	CMSS1	77	57.426	ENSORLG00015015551	cmss1	75	57.000	Oryzias_latipes_hsok
ENSNLEG00000034172	CMSS1	100	54.138	ENSOMEG00000012555	cmss1	100	54.671	Oryzias_melastigma
ENSNLEG00000034172	CMSS1	87	92.544	ENSOGAG00000002045	CMSS1	100	92.544	Otolemur_garnettii
ENSNLEG00000034172	CMSS1	98	90.310	ENSOARG00000017899	CMSS1	89	90.310	Ovis_aries
ENSNLEG00000034172	CMSS1	100	97.701	ENSPPAG00000038515	CMSS1	95	98.450	Pan_paniscus
ENSNLEG00000034172	CMSS1	100	93.907	ENSPPRG00000016767	CMSS1	100	93.907	Panthera_pardus
ENSNLEG00000034172	CMSS1	100	93.548	ENSPTIG00000018274	CMSS1	100	93.548	Panthera_tigris_altaica
ENSNLEG00000034172	CMSS1	100	97.849	ENSPTRG00000015157	CMSS1	100	97.959	Pan_troglodytes
ENSNLEG00000034172	CMSS1	100	93.103	ENSPANG00000019980	CMSS1	99	93.798	Papio_anubis
ENSNLEG00000034172	CMSS1	94	56.250	ENSPKIG00000012609	cmss1	97	56.818	Paramormyrops_kingsleyae
ENSNLEG00000034172	CMSS1	88	72.926	ENSPSIG00000003849	CMSS1	100	72.926	Pelodiscus_sinensis
ENSNLEG00000034172	CMSS1	90	57.203	ENSPMGG00000010286	cmss1	86	61.194	Periophthalmus_magnuspinnatus
ENSNLEG00000034172	CMSS1	100	84.286	ENSPEMG00000016384	Cmss1	100	84.286	Peromyscus_maniculatus_bairdii
ENSNLEG00000034172	CMSS1	78	52.451	ENSPMAG00000001146	cmss1	98	52.500	Petromyzon_marinus
ENSNLEG00000034172	CMSS1	100	73.485	ENSPCIG00000015656	CMSS1	100	73.485	Phascolarctos_cinereus
ENSNLEG00000034172	CMSS1	100	52.448	ENSPFOG00000016849	cmss1	100	52.797	Poecilia_formosa
ENSNLEG00000034172	CMSS1	100	52.098	ENSPLAG00000008323	cmss1	100	52.448	Poecilia_latipinna
ENSNLEG00000034172	CMSS1	100	50.492	ENSPMEG00000021020	cmss1	100	52.431	Poecilia_mexicana
ENSNLEG00000034172	CMSS1	89	59.322	ENSPREG00000007618	cmss1	68	62.500	Poecilia_reticulata
ENSNLEG00000034172	CMSS1	100	96.774	ENSPPYG00000013606	CMSS1	100	96.774	Pongo_abelii
ENSNLEG00000034172	CMSS1	100	92.473	ENSPCOG00000020035	CMSS1	100	92.473	Propithecus_coquereli
ENSNLEG00000034172	CMSS1	100	79.211	ENSPVAG00000017031	CMSS1	100	79.211	Pteropus_vampyrus
ENSNLEG00000034172	CMSS1	91	49.281	ENSPNYG00000013428	cmss1	97	50.000	Pundamilia_nyererei
ENSNLEG00000034172	CMSS1	100	47.841	ENSPNAG00000007912	cmss1	100	48.505	Pygocentrus_nattereri
ENSNLEG00000034172	CMSS1	99	82.692	ENSRNOG00000027888	Cmss1	100	82.692	Rattus_norvegicus
ENSNLEG00000034172	CMSS1	100	96.935	ENSRBIG00000037931	CMSS1	100	96.935	Rhinopithecus_bieti
ENSNLEG00000034172	CMSS1	100	96.935	ENSRROG00000042910	CMSS1	100	96.935	Rhinopithecus_roxellana
ENSNLEG00000034172	CMSS1	100	95.038	ENSSBOG00000030980	CMSS1	100	95.038	Saimiri_boliviensis_boliviensis
ENSNLEG00000034172	CMSS1	95	75.000	ENSSHAG00000009321	CMSS1	99	75.000	Sarcophilus_harrisii
ENSNLEG00000034172	CMSS1	100	53.535	ENSSFOG00015001509	cmss1	100	55.782	Scleropages_formosus
ENSNLEG00000034172	CMSS1	100	51.546	ENSSMAG00000001653	cmss1	100	52.508	Scophthalmus_maximus
ENSNLEG00000034172	CMSS1	100	52.234	ENSSDUG00000007719	cmss1	100	54.452	Seriola_dumerili
ENSNLEG00000034172	CMSS1	79	63.768	ENSSLDG00000012300	cmss1	75	58.889	Seriola_lalandi_dorsalis
ENSNLEG00000034172	CMSS1	100	75.357	ENSSARG00000003584	CMSS1	100	75.357	Sorex_araneus
ENSNLEG00000034172	CMSS1	87	69.912	ENSSPUG00000003865	CMSS1	100	69.912	Sphenodon_punctatus
ENSNLEG00000034172	CMSS1	93	55.431	ENSSPAG00000019182	cmss1	82	55.431	Stegastes_partitus
ENSNLEG00000034172	CMSS1	100	93.907	ENSSSCG00000011970	CMSS1	100	93.907	Sus_scrofa
ENSNLEG00000034172	CMSS1	88	65.939	ENSTGUG00000013635	CMSS1	100	65.939	Taeniopygia_guttata
ENSNLEG00000034172	CMSS1	100	51.408	ENSTRUG00000015265	cmss1	100	52.113	Takifugu_rubripes
ENSNLEG00000034172	CMSS1	77	56.436	ENSTNIG00000002880	cmss1	88	51.440	Tetraodon_nigroviridis
ENSNLEG00000034172	CMSS1	100	61.071	ENSTBEG00000016722	CMSS1	100	61.071	Tupaia_belangeri
ENSNLEG00000034172	CMSS1	100	88.530	ENSTTRG00000001562	CMSS1	100	88.530	Tursiops_truncatus
ENSNLEG00000034172	CMSS1	99	92.664	ENSUAMG00000024209	CMSS1	100	95.516	Ursus_americanus
ENSNLEG00000034172	CMSS1	99	92.636	ENSUMAG00000001983	CMSS1	99	92.248	Ursus_maritimus
ENSNLEG00000034172	CMSS1	100	69.176	ENSVPAG00000000263	CMSS1	100	69.176	Vicugna_pacos
ENSNLEG00000034172	CMSS1	94	91.870	ENSVVUG00000021647	-	100	91.870	Vulpes_vulpes
ENSNLEG00000034172	CMSS1	83	93.981	ENSVVUG00000007776	-	85	93.981	Vulpes_vulpes
ENSNLEG00000034172	CMSS1	100	54.480	ENSXETG00000011858	cmss1	100	54.480	Xenopus_tropicalis
ENSNLEG00000034172	CMSS1	80	62.981	ENSXCOG00000018724	cmss1	68	63.000	Xiphophorus_couchianus
ENSNLEG00000034172	CMSS1	80	62.981	ENSXMAG00000011243	cmss1	75	63.000	Xiphophorus_maculatus