EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000034385 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A1 pseudogene
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 1093 bases
Position: chrX:89089778-89090870
Accession: 105738079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000046282	RRM_1	PF00076.22	5.9e-21	1	2
ENSNLEP00000046282	RRM_1	PF00076.22	5.9e-21	2	2
ENSNLEP00000026771	RRM_1	PF00076.22	6e-21	1	2
ENSNLEP00000026771	RRM_1	PF00076.22	6e-21	2	2
ENSNLEP00000026771	HnRNPA1	PF11627.8	8.4e-14	1	1
ENSNLEP00000046282	HnRNPA1	PF11627.8	4.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000056393	-	1047	-	ENSNLEP00000026771	348 (aa)	-	A0A2I3G3P9
ENSNLET00000040280	-	1041	-	ENSNLEP00000046282	346 (aa)	-	A0A2I3HRW3

Gene Model

Click here to download ENSNLEG00000034385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000034385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000034385	-	64	56.223	ENSNLEG00000034545	-	84	56.696
ENSNLEG00000034385	-	61	88.000	ENSNLEG00000031828	-	57	68.912
ENSNLEG00000034385	-	67	84.127	ENSNLEG00000017659	HNRNPA1	88	84.456
ENSNLEG00000034385	-	68	33.945	ENSNLEG00000008059	MSI2	73	37.821
ENSNLEG00000034385	-	51	70.370	ENSNLEG00000010858	-	81	52.351
ENSNLEG00000034385	-	63	56.303	ENSNLEG00000032894	-	65	60.428
ENSNLEG00000034385	-	64	45.575	ENSNLEG00000008518	HNRNPA0	59	50.543
ENSNLEG00000034385	-	57	63.942	ENSNLEG00000014918	HNRNPA2B1	77	67.039
ENSNLEG00000034385	-	70	74.104	ENSNLEG00000027980	-	65	77.049
ENSNLEG00000034385	-	91	65.732	ENSNLEG00000032512	-	95	65.075
ENSNLEG00000034385	-	52	77.778	ENSNLEG00000029989	-	99	74.095
ENSNLEG00000034385	-	64	33.197	ENSNLEG00000001563	DAZAP1	52	37.037
ENSNLEG00000034385	-	51	67.196	ENSNLEG00000015913	-	64	67.914

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000034385	-	99	54.201	ENSCAFG00000030783	-	59	60.417	Canis_familiaris
ENSNLEG00000034385	-	54	55.779	ENSCAFG00000017424	-	65	56.915	Canis_familiaris
ENSNLEG00000034385	-	99	72.237	ENSCSAG00000000148	-	95	72.316	Chlorocebus_sabaeus
ENSNLEG00000034385	-	100	68.534	ENSCSAG00000004770	-	88	75.648	Chlorocebus_sabaeus
ENSNLEG00000034385	-	57	70.213	ENSDNOG00000037420	-	83	69.767	Dasypus_novemcinctus
ENSNLEG00000034385	-	71	62.403	ENSDNOG00000036385	-	90	64.045	Dasypus_novemcinctus
ENSNLEG00000034385	-	66	65.854	ENSDNOG00000039025	-	81	63.542	Dasypus_novemcinctus
ENSNLEG00000034385	-	77	71.429	ENSETEG00000007429	-	86	71.053	Echinops_telfairi
ENSNLEG00000034385	-	74	69.767	ENSETEG00000013374	-	87	67.500	Echinops_telfairi
ENSNLEG00000034385	-	60	71.795	ENSETEG00000010614	-	88	71.795	Echinops_telfairi
ENSNLEG00000034385	-	90	73.846	ENSELUG00000020089	-	77	65.417	Esox_lucius
ENSNLEG00000034385	-	61	70.909	ENSFDAG00000009166	-	82	70.000	Fukomys_damarensis
ENSNLEG00000034385	-	68	64.777	ENSMPUG00000000096	-	75	66.839	Mustela_putorius_furo
ENSNLEG00000034385	-	52	81.250	ENSOCUG00000022668	-	56	81.250	Oryctolagus_cuniculus
ENSNLEG00000034385	-	66	59.677	ENSOARG00000010092	-	76	68.182	Ovis_aries
ENSNLEG00000034385	-	71	81.522	ENSPPRG00000018110	-	78	81.395	Panthera_pardus