EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000034397 (Gene tree)
Gene ID: 100607163
Gene Symbol: RPP40
Alias: RNASEP1|bA428J1.3
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 8603 bases
Position: chr8:55363869-55372471
Accession: 100607163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000035978	Ribonuc_P_40	PF08584.11	1.6e-94	1	1
ENSNLEP00000027151	Ribonuc_P_40	PF08584.11	7e-78	1	1
ENSNLEP00000027673	Ribonuc_P_40	PF08584.11	1.9e-74	1	2
ENSNLEP00000027673	Ribonuc_P_40	PF08584.11	1.9e-74	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000037986	RPP40-201	1178	XM_003272227	ENSNLEP00000035978	363 (aa)	XP_003272275	A0A2I3GX96
ENSNLET00000047655	RPP40-203	1052	XM_012508791	ENSNLEP00000027673	321 (aa)	XP_012364245	A0A2I3G8K5
ENSNLET00000049398	RPP40-202	1109	XM_012508790	ENSNLEP00000027151	340 (aa)	XP_012364244	A0A2I3G693

Gene Model

Click here to download ENSNLEG00000034397's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03008	Ribosome biogenesis in eukaryotes	KEGG
nle03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000034397's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000034397	RPP40	100	97.353	ENSG00000124787	RPP40	100	97.353	Homo_sapiens
ENSNLEG00000034397	RPP40	88	32.107	ENSAPOG00000008660	rpp40	92	32.107	Acanthochromis_polyacanthus
ENSNLEG00000034397	RPP40	100	86.226	ENSAMEG00000012938	RPP40	100	86.226	Ailuropoda_melanoleuca
ENSNLEG00000034397	RPP40	98	36.740	ENSACIG00000003617	rpp40	98	36.740	Amphilophus_citrinellus
ENSNLEG00000034397	RPP40	98	37.815	ENSAOCG00000011846	rpp40	99	37.815	Amphiprion_ocellaris
ENSNLEG00000034397	RPP40	98	37.815	ENSAPEG00000001322	rpp40	99	37.815	Amphiprion_percula
ENSNLEG00000034397	RPP40	98	38.440	ENSATEG00000006584	rpp40	99	38.440	Anabas_testudineus
ENSNLEG00000034397	RPP40	83	67.333	ENSAPLG00000005691	RPP40	99	67.333	Anas_platyrhynchos
ENSNLEG00000034397	RPP40	99	62.953	ENSACAG00000006550	RPP40	88	62.953	Anolis_carolinensis
ENSNLEG00000034397	RPP40	100	93.529	ENSANAG00000029246	RPP40	100	93.529	Aotus_nancymaae
ENSNLEG00000034397	RPP40	98	38.310	ENSACLG00000015883	rpp40	96	38.310	Astatotilapia_calliptera
ENSNLEG00000034397	RPP40	98	48.459	ENSAMXG00000001755	rpp40	99	48.459	Astyanax_mexicanus
ENSNLEG00000034397	RPP40	100	82.094	ENSBTAG00000003332	RPP40	100	82.094	Bos_taurus
ENSNLEG00000034397	RPP40	100	94.412	ENSCJAG00000021373	RPP40	100	94.412	Callithrix_jacchus
ENSNLEG00000034397	RPP40	100	85.950	ENSCAFG00000009435	RPP40	100	85.950	Canis_familiaris
ENSNLEG00000034397	RPP40	100	85.950	ENSCAFG00020013380	RPP40	100	85.950	Canis_lupus_dingo
ENSNLEG00000034397	RPP40	100	81.818	ENSCHIG00000016849	RPP40	100	81.818	Capra_hircus
ENSNLEG00000034397	RPP40	100	88.705	ENSTSYG00000032857	RPP40	100	89.439	Carlito_syrichta
ENSNLEG00000034397	RPP40	90	77.676	ENSCAPG00000004957	RPP40	98	77.676	Cavia_aperea
ENSNLEG00000034397	RPP40	100	84.573	ENSCPOG00000005855	RPP40	100	84.573	Cavia_porcellus
ENSNLEG00000034397	RPP40	100	95.000	ENSCCAG00000019809	RPP40	100	95.000	Cebus_capucinus
ENSNLEG00000034397	RPP40	100	95.041	ENSCATG00000038787	RPP40	100	95.041	Cercocebus_atys
ENSNLEG00000034397	RPP40	100	84.573	ENSCLAG00000003235	RPP40	100	84.573	Chinchilla_lanigera
ENSNLEG00000034397	RPP40	100	95.317	ENSCSAG00000007307	RPP40	100	95.317	Chlorocebus_sabaeus
ENSNLEG00000034397	RPP40	74	68.400	ENSCHOG00000005856	-	100	68.400	Choloepus_hoffmanni
ENSNLEG00000034397	RPP40	99	69.444	ENSCPBG00000009003	RPP40	99	69.444	Chrysemys_picta_bellii
ENSNLEG00000034397	RPP40	100	95.882	ENSCANG00000033965	RPP40	100	95.882	Colobus_angolensis_palliatus
ENSNLEG00000034397	RPP40	100	79.063	ENSCGRG00001018328	Rpp40	100	79.063	Cricetulus_griseus_chok1gshd
ENSNLEG00000034397	RPP40	100	79.063	ENSCGRG00000011344	Rpp40	100	79.063	Cricetulus_griseus_crigri
ENSNLEG00000034397	RPP40	98	35.674	ENSCSEG00000015006	-	98	35.674	Cynoglossus_semilaevis
ENSNLEG00000034397	RPP40	74	32.841	ENSCVAG00000012169	rpp40	100	32.841	Cyprinodon_variegatus
ENSNLEG00000034397	RPP40	98	50.559	ENSDARG00000017605	rpp40	99	50.559	Danio_rerio
ENSNLEG00000034397	RPP40	82	81.145	ENSDNOG00000048136	RPP40	99	81.145	Dasypus_novemcinctus
ENSNLEG00000034397	RPP40	100	82.094	ENSDORG00000029944	-	100	82.094	Dipodomys_ordii
ENSNLEG00000034397	RPP40	100	62.428	ENSDORG00000011196	-	100	62.428	Dipodomys_ordii
ENSNLEG00000034397	RPP40	90	79.817	ENSETEG00000007458	RPP40	100	65.565	Echinops_telfairi
ENSNLEG00000034397	RPP40	98	43.380	ENSEBUG00000000386	rpp40	99	43.380	Eptatretus_burgeri
ENSNLEG00000034397	RPP40	100	87.603	ENSEASG00005012116	RPP40	80	87.603	Equus_asinus_asinus
ENSNLEG00000034397	RPP40	100	87.328	ENSECAG00000017247	RPP40	80	87.328	Equus_caballus
ENSNLEG00000034397	RPP40	68	80.488	ENSEEUG00000012087	RPP40	100	65.993	Erinaceus_europaeus
ENSNLEG00000034397	RPP40	98	48.603	ENSELUG00000017004	rpp40	99	48.603	Esox_lucius
ENSNLEG00000034397	RPP40	100	86.501	ENSFCAG00000009249	RPP40	100	86.501	Felis_catus
ENSNLEG00000034397	RPP40	86	65.443	ENSFALG00000013166	RPP40	100	65.443	Ficedula_albicollis
ENSNLEG00000034397	RPP40	100	85.675	ENSFDAG00000013001	-	100	85.675	Fukomys_damarensis
ENSNLEG00000034397	RPP40	80	69.759	ENSFDAG00000000265	-	99	69.759	Fukomys_damarensis
ENSNLEG00000034397	RPP40	98	39.776	ENSFHEG00000021429	rpp40	88	39.776	Fundulus_heteroclitus
ENSNLEG00000034397	RPP40	87	43.571	ENSGMOG00000018653	rpp40	100	43.571	Gadus_morhua
ENSNLEG00000034397	RPP40	99	65.833	ENSGALG00000036074	RPP40	99	65.833	Gallus_gallus
ENSNLEG00000034397	RPP40	82	34.564	ENSGAFG00000004189	-	98	34.564	Gambusia_affinis
ENSNLEG00000034397	RPP40	98	38.375	ENSGACG00000002472	rpp40	99	38.375	Gasterosteus_aculeatus
ENSNLEG00000034397	RPP40	99	69.722	ENSGAGG00000012918	RPP40	99	69.722	Gopherus_agassizii
ENSNLEG00000034397	RPP40	100	96.765	ENSGGOG00000013764	RPP40	100	96.765	Gorilla_gorilla
ENSNLEG00000034397	RPP40	90	37.615	ENSHBUG00000009378	rpp40	93	37.615	Haplochromis_burtoni
ENSNLEG00000034397	RPP40	100	85.675	ENSHGLG00000004871	RPP40	100	85.675	Heterocephalus_glaber_female
ENSNLEG00000034397	RPP40	100	85.675	ENSHGLG00100002080	RPP40	100	85.675	Heterocephalus_glaber_male
ENSNLEG00000034397	RPP40	97	31.445	ENSHCOG00000013264	-	94	31.445	Hippocampus_comes
ENSNLEG00000034397	RPP40	99	47.778	ENSIPUG00000008951	RPP40	99	47.778	Ictalurus_punctatus
ENSNLEG00000034397	RPP40	100	84.848	ENSSTOG00000011199	RPP40	100	84.848	Ictidomys_tridecemlineatus
ENSNLEG00000034397	RPP40	100	79.063	ENSJJAG00000020629	Rpp40	100	79.063	Jaculus_jaculus
ENSNLEG00000034397	RPP40	98	36.975	ENSKMAG00000019358	rpp40	99	36.975	Kryptolebias_marmoratus
ENSNLEG00000034397	RPP40	98	39.776	ENSLBEG00000022724	rpp40	99	39.776	Labrus_bergylta
ENSNLEG00000034397	RPP40	99	59.167	ENSLACG00000014848	RPP40	99	59.167	Latimeria_chalumnae
ENSNLEG00000034397	RPP40	100	53.444	ENSLOCG00000011650	rpp40	100	53.444	Lepisosteus_oculatus
ENSNLEG00000034397	RPP40	83	83.828	ENSLAFG00000007530	RPP40	100	83.828	Loxodonta_africana
ENSNLEG00000034397	RPP40	100	95.294	ENSMFAG00000043100	RPP40	100	95.294	Macaca_fascicularis
ENSNLEG00000034397	RPP40	100	95.000	ENSMMUG00000004966	RPP40	100	95.000	Macaca_mulatta
ENSNLEG00000034397	RPP40	100	95.882	ENSMNEG00000041986	RPP40	100	95.882	Macaca_nemestrina
ENSNLEG00000034397	RPP40	98	85.970	ENSMLEG00000040851	RPP40	100	92.045	Mandrillus_leucophaeus
ENSNLEG00000034397	RPP40	98	38.655	ENSMAMG00000019551	rpp40	98	38.655	Mastacembelus_armatus
ENSNLEG00000034397	RPP40	99	38.781	ENSMZEG00005019475	rpp40	99	38.781	Maylandia_zebra
ENSNLEG00000034397	RPP40	99	61.667	ENSMGAG00000004009	RPP40	99	61.667	Meleagris_gallopavo
ENSNLEG00000034397	RPP40	100	82.645	ENSMAUG00000010268	Rpp40	100	82.645	Mesocricetus_auratus
ENSNLEG00000034397	RPP40	100	86.501	ENSMICG00000003297	RPP40	100	86.176	Microcebus_murinus
ENSNLEG00000034397	RPP40	100	82.647	ENSMOCG00000000305	Rpp40	100	82.647	Microtus_ochrogaster
ENSNLEG00000034397	RPP40	98	34.615	ENSMMOG00000020591	-	99	34.615	Mola_mola
ENSNLEG00000034397	RPP40	100	80.495	ENSMODG00000009826	RPP40	100	80.495	Monodelphis_domestica
ENSNLEG00000034397	RPP40	98	39.048	ENSMALG00000020133	rpp40	99	38.655	Monopterus_albus
ENSNLEG00000034397	RPP40	100	82.094	MGP_CAROLIEiJ_G0018429	Rpp40	100	82.094	Mus_caroli
ENSNLEG00000034397	RPP40	100	83.235	ENSMUSG00000021418	Rpp40	100	83.235	Mus_musculus
ENSNLEG00000034397	RPP40	100	81.471	MGP_PahariEiJ_G0019497	Rpp40	100	81.471	Mus_pahari
ENSNLEG00000034397	RPP40	100	82.647	MGP_SPRETEiJ_G0019309	Rpp40	100	82.647	Mus_spretus
ENSNLEG00000034397	RPP40	100	85.675	ENSMPUG00000000530	RPP40	93	85.675	Mustela_putorius_furo
ENSNLEG00000034397	RPP40	100	84.298	ENSMLUG00000000501	RPP40	100	84.298	Myotis_lucifugus
ENSNLEG00000034397	RPP40	95	75.434	ENSNGAG00000022529	-	100	75.434	Nannospalax_galili
ENSNLEG00000034397	RPP40	100	84.298	ENSNGAG00000023955	-	100	84.298	Nannospalax_galili
ENSNLEG00000034397	RPP40	87	37.000	ENSNBRG00000017465	rpp40	86	37.171	Neolamprologus_brichardi
ENSNLEG00000034397	RPP40	100	73.829	ENSMEUG00000005300	RPP40	100	73.829	Notamacropus_eugenii
ENSNLEG00000034397	RPP40	100	77.961	ENSODEG00000018153	-	100	77.961	Octodon_degus
ENSNLEG00000034397	RPP40	88	82.274	ENSODEG00000006170	-	100	82.274	Octodon_degus
ENSNLEG00000034397	RPP40	100	82.369	ENSODEG00000007255	-	100	82.369	Octodon_degus
ENSNLEG00000034397	RPP40	99	38.781	ENSONIG00000014016	rpp40	99	38.781	Oreochromis_niloticus
ENSNLEG00000034397	RPP40	83	73.841	ENSOANG00000001200	RPP40	99	73.841	Ornithorhynchus_anatinus
ENSNLEG00000034397	RPP40	99	75.623	ENSOCUG00000000354	RPP40	99	75.623	Oryctolagus_cuniculus
ENSNLEG00000034397	RPP40	99	38.056	ENSORLG00000008242	-	100	38.056	Oryzias_latipes
ENSNLEG00000034397	RPP40	99	37.222	ENSORLG00020013745	-	91	37.222	Oryzias_latipes_hni
ENSNLEG00000034397	RPP40	99	37.778	ENSORLG00015000887	-	100	37.778	Oryzias_latipes_hsok
ENSNLEG00000034397	RPP40	99	38.504	ENSOMEG00000002747	rpp40	100	38.504	Oryzias_melastigma
ENSNLEG00000034397	RPP40	100	87.879	ENSOGAG00000006055	RPP40	100	87.879	Otolemur_garnettii
ENSNLEG00000034397	RPP40	91	79.279	ENSOARG00000018783	RPP40	100	80.858	Ovis_aries
ENSNLEG00000034397	RPP40	100	96.471	ENSPPAG00000023703	RPP40	100	96.471	Pan_paniscus
ENSNLEG00000034397	RPP40	100	86.226	ENSPPRG00000005612	RPP40	100	86.226	Panthera_pardus
ENSNLEG00000034397	RPP40	100	79.614	ENSPTIG00000018847	RPP40	100	79.614	Panthera_tigris_altaica
ENSNLEG00000034397	RPP40	100	96.176	ENSPTRG00000017690	RPP40	100	96.176	Pan_troglodytes
ENSNLEG00000034397	RPP40	100	95.317	ENSPANG00000017865	RPP40	100	95.317	Papio_anubis
ENSNLEG00000034397	RPP40	98	50.559	ENSPKIG00000006311	rpp40	99	50.559	Paramormyrops_kingsleyae
ENSNLEG00000034397	RPP40	65	70.270	ENSPSIG00000007854	RPP40	100	70.270	Pelodiscus_sinensis
ENSNLEG00000034397	RPP40	92	77.389	ENSPEMG00000020809	Rpp40	91	77.389	Peromyscus_maniculatus_bairdii
ENSNLEG00000034397	RPP40	75	46.350	ENSPMAG00000008412	rpp40	99	46.350	Petromyzon_marinus
ENSNLEG00000034397	RPP40	100	80.441	ENSPCIG00000010682	RPP40	100	80.441	Phascolarctos_cinereus
ENSNLEG00000034397	RPP40	98	35.655	ENSPFOG00000011460	rpp40	98	35.655	Poecilia_formosa
ENSNLEG00000034397	RPP40	98	36.134	ENSPLAG00000001334	rpp40	99	36.134	Poecilia_latipinna
ENSNLEG00000034397	RPP40	98	35.854	ENSPMEG00000007721	rpp40	99	35.854	Poecilia_mexicana
ENSNLEG00000034397	RPP40	98	36.975	ENSPREG00000009215	rpp40	99	36.975	Poecilia_reticulata
ENSNLEG00000034397	RPP40	100	96.694	ENSPPYG00000016194	RPP40	100	96.694	Pongo_abelii
ENSNLEG00000034397	RPP40	51	83.152	ENSPCAG00000002700	-	99	83.152	Procavia_capensis
ENSNLEG00000034397	RPP40	100	87.879	ENSPCOG00000003907	RPP40	100	87.879	Propithecus_coquereli
ENSNLEG00000034397	RPP40	100	87.328	ENSPVAG00000011325	RPP40	100	87.328	Pteropus_vampyrus
ENSNLEG00000034397	RPP40	82	38.255	ENSPNYG00000004432	rpp40	98	38.255	Pundamilia_nyererei
ENSNLEG00000034397	RPP40	98	47.207	ENSPNAG00000019125	rpp40	99	47.207	Pygocentrus_nattereri
ENSNLEG00000034397	RPP40	100	82.369	ENSRNOG00000016226	Rpp40	100	82.369	Rattus_norvegicus
ENSNLEG00000034397	RPP40	100	96.176	ENSRBIG00000035800	RPP40	100	96.176	Rhinopithecus_bieti
ENSNLEG00000034397	RPP40	100	96.176	ENSRROG00000039116	RPP40	100	96.176	Rhinopithecus_roxellana
ENSNLEG00000034397	RPP40	100	94.412	ENSSBOG00000020297	RPP40	100	94.412	Saimiri_boliviensis_boliviensis
ENSNLEG00000034397	RPP40	77	79.496	ENSSHAG00000002102	RPP40	100	79.496	Sarcophilus_harrisii
ENSNLEG00000034397	RPP40	99	49.036	ENSSFOG00015001142	rpp40	81	49.036	Scleropages_formosus
ENSNLEG00000034397	RPP40	98	37.255	ENSSDUG00000007202	rpp40	99	37.255	Seriola_dumerili
ENSNLEG00000034397	RPP40	98	37.535	ENSSLDG00000017563	rpp40	99	37.535	Seriola_lalandi_dorsalis
ENSNLEG00000034397	RPP40	99	66.981	ENSSPUG00000017487	-	99	66.981	Sphenodon_punctatus
ENSNLEG00000034397	RPP40	81	65.424	ENSSPUG00000018950	-	100	65.424	Sphenodon_punctatus
ENSNLEG00000034397	RPP40	98	39.216	ENSSPAG00000022716	rpp40	99	39.216	Stegastes_partitus
ENSNLEG00000034397	RPP40	100	80.685	ENSSSCG00000000998	RPP40	100	80.685	Sus_scrofa
ENSNLEG00000034397	RPP40	99	65.642	ENSTGUG00000002258	-	100	65.642	Taeniopygia_guttata
ENSNLEG00000034397	RPP40	55	70.056	ENSTGUG00000015246	-	100	70.621	Taeniopygia_guttata
ENSNLEG00000034397	RPP40	97	39.093	ENSTRUG00000003755	rpp40	98	39.093	Takifugu_rubripes
ENSNLEG00000034397	RPP40	97	37.110	ENSTNIG00000003077	rpp40	98	37.110	Tetraodon_nigroviridis
ENSNLEG00000034397	RPP40	74	60.800	ENSTBEG00000014467	-	73	60.800	Tupaia_belangeri
ENSNLEG00000034397	RPP40	99	76.519	ENSTTRG00000007319	RPP40	100	76.519	Tursiops_truncatus
ENSNLEG00000034397	RPP40	100	85.950	ENSUAMG00000002159	RPP40	100	85.950	Ursus_americanus
ENSNLEG00000034397	RPP40	100	85.950	ENSUMAG00000018639	RPP40	94	85.950	Ursus_maritimus
ENSNLEG00000034397	RPP40	81	61.565	ENSVPAG00000004652	-	99	61.565	Vicugna_pacos
ENSNLEG00000034397	RPP40	100	85.399	ENSVVUG00000005451	RPP40	100	85.399	Vulpes_vulpes
ENSNLEG00000034397	RPP40	99	56.438	ENSXETG00000017617	rpp40	100	56.438	Xenopus_tropicalis
ENSNLEG00000034397	RPP40	63	44.094	ENSXCOG00000019991	-	93	30.925	Xiphophorus_couchianus
ENSNLEG00000034397	RPP40	98	31.214	ENSXMAG00000024940	rpp40	98	31.214	Xiphophorus_maculatus