EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000035811 (Gene tree)
Gene ID: 100585498
Gene Symbol: -
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3D
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 11085 bases
Position: chr7b:11584458-11595542
Accession: 100585498
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000028969	APOBEC_N	PF08210.11	1.8e-92	1	3
ENSNLEP00000028969	APOBEC_N	PF08210.11	1.8e-92	2	3
ENSNLEP00000028969	APOBEC_N	PF08210.11	1.8e-92	3	3
ENSNLEP00000028969	APOBEC_C	PF05240.14	5.6e-64	1	2
ENSNLEP00000028969	APOBEC_C	PF05240.14	5.6e-64	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000054018	-	1098	XM_003264769	ENSNLEP00000028969	365 (aa)	XP_003264817	A0A2I3GCB3

Gene Model

Click here to download ENSNLEG00000035811's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000035811's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000035811	-	95	36.207	ENSNLEG00000001917	AICDA	91	36.207
ENSNLEG00000035811	-	100	62.632	ENSNLEG00000028392	APOBEC3C	100	62.632
ENSNLEG00000035811	-	98	38.344	ENSNLEG00000018922	-	100	38.344
ENSNLEG00000035811	-	62	41.284	ENSNLEG00000015218	-	60	41.284
ENSNLEG00000035811	-	99	53.846	ENSNLEG00000015215	-	80	53.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000035811	-	100	77.720	ENSG00000243811	APOBEC3D	100	77.720	Homo_sapiens
ENSNLEG00000035811	-	100	71.762	ENSG00000128394	APOBEC3F	100	71.762	Homo_sapiens
ENSNLEG00000035811	-	100	64.211	ENSG00000244509	APOBEC3C	100	64.211	Homo_sapiens
ENSNLEG00000035811	-	100	66.494	ENSANAG00000030088	-	99	66.494	Aotus_nancymaae
ENSNLEG00000035811	-	65	59.091	ENSCJAG00000015317	-	100	59.091	Callithrix_jacchus
ENSNLEG00000035811	-	94	41.711	ENSCAFG00020002615	-	99	41.711	Canis_lupus_dingo
ENSNLEG00000035811	-	97	48.913	ENSTSYG00000028254	-	99	48.913	Carlito_syrichta
ENSNLEG00000035811	-	98	45.128	ENSTSYG00000030036	-	99	45.128	Carlito_syrichta
ENSNLEG00000035811	-	100	48.413	ENSTSYG00000034260	-	98	48.413	Carlito_syrichta
ENSNLEG00000035811	-	99	60.526	ENSCCAG00000030932	-	86	60.526	Cebus_capucinus
ENSNLEG00000035811	-	100	71.348	ENSCATG00000033502	-	100	69.792	Cercocebus_atys
ENSNLEG00000035811	-	100	60.000	ENSCATG00000043226	APOBEC3C	100	60.000	Cercocebus_atys
ENSNLEG00000035811	-	100	73.057	ENSCSAG00000006382	APOBEC3F	100	73.057	Chlorocebus_sabaeus
ENSNLEG00000035811	-	100	60.526	ENSCSAG00000006402	APOBEC3C	100	60.526	Chlorocebus_sabaeus
ENSNLEG00000035811	-	100	68.653	ENSCANG00000032904	-	100	68.653	Colobus_angolensis_palliatus
ENSNLEG00000035811	-	100	60.000	ENSCANG00000039177	APOBEC3C	100	60.000	Colobus_angolensis_palliatus
ENSNLEG00000035811	-	100	71.646	ENSCANG00000031957	-	100	71.646	Colobus_angolensis_palliatus
ENSNLEG00000035811	-	98	66.304	ENSCANG00000033269	-	99	66.304	Colobus_angolensis_palliatus
ENSNLEG00000035811	-	99	31.313	ENSDNOG00000044642	-	98	31.313	Dasypus_novemcinctus
ENSNLEG00000035811	-	100	41.951	ENSEASG00005018641	-	100	41.951	Equus_asinus_asinus
ENSNLEG00000035811	-	99	43.284	ENSECAG00000006071	-	100	41.463	Equus_caballus
ENSNLEG00000035811	-	100	65.263	ENSGGOG00000036587	-	100	65.263	Gorilla_gorilla
ENSNLEG00000035811	-	100	71.244	ENSGGOG00000038678	APOBEC3F	100	71.244	Gorilla_gorilla
ENSNLEG00000035811	-	99	41.667	ENSHGLG00000017315	-	92	41.667	Heterocephalus_glaber_female
ENSNLEG00000035811	-	99	41.667	ENSHGLG00100003105	-	95	41.667	Heterocephalus_glaber_male
ENSNLEG00000035811	-	100	59.474	ENSMFAG00000016792	APOBEC3C	100	59.474	Macaca_fascicularis
ENSNLEG00000035811	-	100	75.130	ENSMFAG00000002331	-	100	75.130	Macaca_fascicularis
ENSNLEG00000035811	-	100	69.430	ENSMFAG00000004037	APOBEC3F	100	69.430	Macaca_fascicularis
ENSNLEG00000035811	-	98	60.326	ENSMMUG00000004018	APOBEC3C	95	60.326	Macaca_mulatta
ENSNLEG00000035811	-	100	76.684	ENSMMUG00000004017	APOBEC3F	100	76.684	Macaca_mulatta
ENSNLEG00000035811	-	100	59.474	ENSMNEG00000045196	APOBEC3C	100	59.474	Macaca_nemestrina
ENSNLEG00000035811	-	100	75.443	ENSMNEG00000043316	APOBEC3D	100	75.443	Macaca_nemestrina
ENSNLEG00000035811	-	100	69.430	ENSMLEG00000029642	APOBEC3F	100	69.430	Mandrillus_leucophaeus
ENSNLEG00000035811	-	100	60.526	ENSMLEG00000036992	APOBEC3C	100	60.526	Mandrillus_leucophaeus
ENSNLEG00000035811	-	99	47.000	ENSMICG00000042615	-	89	47.000	Microcebus_murinus
ENSNLEG00000035811	-	99	41.872	ENSMLUG00000023676	-	99	41.872	Myotis_lucifugus
ENSNLEG00000035811	-	99	37.696	ENSOGAG00000030300	-	99	37.696	Otolemur_garnettii
ENSNLEG00000035811	-	99	44.670	ENSOGAG00000032498	-	99	44.670	Otolemur_garnettii
ENSNLEG00000035811	-	98	40.720	ENSOGAG00000033404	-	99	40.720	Otolemur_garnettii
ENSNLEG00000035811	-	100	63.684	ENSPPAG00000014118	APOBEC3C	100	63.684	Pan_paniscus
ENSNLEG00000035811	-	99	73.899	ENSPPAG00000028218	-	99	73.899	Pan_paniscus
ENSNLEG00000035811	-	99	43.784	ENSPPRG00000003726	-	98	43.784	Panthera_pardus
ENSNLEG00000035811	-	100	73.913	ENSPTRG00000014385	APOBEC3C	100	73.913	Pan_troglodytes
ENSNLEG00000035811	-	100	75.648	ENSPTRG00000041588	APOBEC3D	100	75.648	Pan_troglodytes
ENSNLEG00000035811	-	100	68.135	ENSPANG00000010775	APOBEC3F	100	68.267	Papio_anubis
ENSNLEG00000035811	-	100	60.000	ENSPPYG00000011832	APOBEC3C	100	60.000	Pongo_abelii
ENSNLEG00000035811	-	64	49.194	ENSPCOG00000022067	-	98	49.194	Propithecus_coquereli
ENSNLEG00000035811	-	63	49.206	ENSPCOG00000018072	-	95	49.206	Propithecus_coquereli
ENSNLEG00000035811	-	76	42.373	ENSPVAG00000009461	-	71	42.373	Pteropus_vampyrus
ENSNLEG00000035811	-	99	70.667	ENSRBIG00000030323	-	100	70.667	Rhinopithecus_bieti
ENSNLEG00000035811	-	100	63.990	ENSRBIG00000042297	-	99	67.516	Rhinopithecus_bieti
ENSNLEG00000035811	-	100	70.207	ENSRBIG00000030834	-	100	70.207	Rhinopithecus_bieti
ENSNLEG00000035811	-	100	69.689	ENSRROG00000029045	APOBEC3C	100	69.689	Rhinopithecus_roxellana
ENSNLEG00000035811	-	100	73.316	ENSRROG00000028557	-	100	73.316	Rhinopithecus_roxellana
ENSNLEG00000035811	-	100	63.990	ENSRROG00000029996	-	100	63.990	Rhinopithecus_roxellana
ENSNLEG00000035811	-	99	65.359	ENSSBOG00000032780	-	100	65.359	Saimiri_boliviensis_boliviensis
ENSNLEG00000035811	-	84	40.909	ENSUAMG00000004433	-	89	40.909	Ursus_americanus
ENSNLEG00000035811	-	85	41.899	ENSUMAG00000014441	-	76	41.899	Ursus_maritimus
ENSNLEG00000035811	-	77	43.836	ENSVVUG00000014628	-	88	46.610	Vulpes_vulpes