EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000035917 (Gene tree)
Gene ID: 100580575
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 17344 bases
Position: chr12:76813060-76830403
Accession: 100580575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000042020	TRM13	PF05206.14	1.3e-91	1	1
ENSNLEP00000033617	zf-U11-48K	PF05253.12	7.2e-10	1	1
ENSNLEP00000042020	zf-U11-48K	PF05253.12	3.7e-09	1	1
ENSNLEP00000033617	zf-TRM13_CCCH	PF11722.8	4.7e-14	1	1
ENSNLEP00000042020	zf-TRM13_CCCH	PF11722.8	7.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000049048	TRMT13-202	330	-	ENSNLEP00000033617	109 (aa)	-	A0A2I3GQT3
ENSNLET00000035961	TRMT13-201	3212	XM_003260109	ENSNLEP00000042020	481 (aa)	XP_003260157	A0A2I3HEU0

Gene Model

Click here to download ENSNLEG00000035917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000035917's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000035917	TRMT13	100	100.000	ENSG00000122435	TRMT13	100	99.168	Homo_sapiens
ENSNLEG00000035917	TRMT13	86	60.638	ENSAPOG00000015131	trmt13	99	47.695	Acanthochromis_polyacanthus
ENSNLEG00000035917	TRMT13	100	90.826	ENSAMEG00000008917	TRMT13	100	90.021	Ailuropoda_melanoleuca
ENSNLEG00000035917	TRMT13	99	50.610	ENSACIG00000005804	trmt13	98	50.610	Amphilophus_citrinellus
ENSNLEG00000035917	TRMT13	87	60.000	ENSAOCG00000023585	trmt13	99	48.606	Amphiprion_ocellaris
ENSNLEG00000035917	TRMT13	87	60.000	ENSAPEG00000004025	trmt13	99	48.214	Amphiprion_percula
ENSNLEG00000035917	TRMT13	87	65.263	ENSATEG00000006597	trmt13	97	51.255	Anabas_testudineus
ENSNLEG00000035917	TRMT13	88	67.371	ENSAPLG00000014924	TRMT13	99	67.371	Anas_platyrhynchos
ENSNLEG00000035917	TRMT13	96	64.224	ENSACAG00000003498	TRMT13	98	64.224	Anolis_carolinensis
ENSNLEG00000035917	TRMT13	100	98.165	ENSANAG00000019525	TRMT13	100	98.165	Aotus_nancymaae
ENSNLEG00000035917	TRMT13	96	52.966	ENSACLG00000020018	trmt13	99	52.966	Astatotilapia_calliptera
ENSNLEG00000035917	TRMT13	83	66.667	ENSAMXG00000017963	trmt13	97	55.032	Astyanax_mexicanus
ENSNLEG00000035917	TRMT13	100	90.229	ENSBTAG00000015781	TRMT13	100	90.229	Bos_taurus
ENSNLEG00000035917	TRMT13	100	98.165	ENSCJAG00000000200	TRMT13	99	98.165	Callithrix_jacchus
ENSNLEG00000035917	TRMT13	65	91.401	ENSCAFG00000020021	TRMT13	99	91.401	Canis_familiaris
ENSNLEG00000035917	TRMT13	100	87.273	ENSCAFG00020011572	TRMT13	95	91.575	Canis_lupus_dingo
ENSNLEG00000035917	TRMT13	100	90.437	ENSCHIG00000015395	TRMT13	100	90.437	Capra_hircus
ENSNLEG00000035917	TRMT13	98	81.818	ENSTSYG00000010811	TRMT13	98	85.859	Carlito_syrichta
ENSNLEG00000035917	TRMT13	75	69.589	ENSCAPG00000009085	TRMT13	100	70.137	Cavia_aperea
ENSNLEG00000035917	TRMT13	100	88.991	ENSCPOG00000000694	TRMT13	100	88.981	Cavia_porcellus
ENSNLEG00000035917	TRMT13	100	97.248	ENSCCAG00000023772	TRMT13	100	97.248	Cebus_capucinus
ENSNLEG00000035917	TRMT13	100	97.713	ENSCATG00000033556	TRMT13	100	97.713	Cercocebus_atys
ENSNLEG00000035917	TRMT13	89	84.075	ENSCLAG00000008220	TRMT13	100	85.012	Chinchilla_lanigera
ENSNLEG00000035917	TRMT13	100	98.337	ENSCSAG00000001506	TRMT13	100	98.337	Chlorocebus_sabaeus
ENSNLEG00000035917	TRMT13	99	68.750	ENSCPBG00000026671	TRMT13	99	68.750	Chrysemys_picta_bellii
ENSNLEG00000035917	TRMT13	100	98.545	ENSCANG00000034659	TRMT13	100	98.545	Colobus_angolensis_palliatus
ENSNLEG00000035917	TRMT13	99	85.535	ENSCGRG00001021601	Trmt13	99	85.535	Cricetulus_griseus_chok1gshd
ENSNLEG00000035917	TRMT13	53	82.879	ENSCGRG00000000093	-	99	82.879	Cricetulus_griseus_crigri
ENSNLEG00000035917	TRMT13	96	48.707	ENSCSEG00000000591	trmt13	98	48.707	Cynoglossus_semilaevis
ENSNLEG00000035917	TRMT13	95	48.434	ENSCVAG00000017342	trmt13	93	49.474	Cyprinodon_variegatus
ENSNLEG00000035917	TRMT13	95	57.543	ENSDARG00000102846	trmt13	96	57.543	Danio_rerio
ENSNLEG00000035917	TRMT13	100	82.301	ENSDNOG00000001710	TRMT13	84	87.681	Dasypus_novemcinctus
ENSNLEG00000035917	TRMT13	100	88.073	ENSDORG00000015808	Trmt13	99	87.526	Dipodomys_ordii
ENSNLEG00000035917	TRMT13	95	30.608	FBgn0037435	CG18048	94	30.608	Drosophila_melanogaster
ENSNLEG00000035917	TRMT13	99	83.929	ENSETEG00000005819	TRMT13	99	75.574	Echinops_telfairi
ENSNLEG00000035917	TRMT13	95	45.376	ENSEBUG00000014444	trmt13	97	45.376	Eptatretus_burgeri
ENSNLEG00000035917	TRMT13	100	93.578	ENSEASG00005015918	TRMT13	100	92.308	Equus_asinus_asinus
ENSNLEG00000035917	TRMT13	100	93.578	ENSECAG00000022626	TRMT13	100	92.723	Equus_caballus
ENSNLEG00000035917	TRMT13	96	84.762	ENSEEUG00000000294	TRMT13	80	80.696	Erinaceus_europaeus
ENSNLEG00000035917	TRMT13	96	55.769	ENSELUG00000003803	trmt13	98	56.223	Esox_lucius
ENSNLEG00000035917	TRMT13	100	90.852	ENSFCAG00000030618	TRMT13	100	90.852	Felis_catus
ENSNLEG00000035917	TRMT13	100	65.138	ENSFALG00000002424	TRMT13	99	64.017	Ficedula_albicollis
ENSNLEG00000035917	TRMT13	99	90.126	ENSFDAG00000006342	TRMT13	99	90.126	Fukomys_damarensis
ENSNLEG00000035917	TRMT13	83	57.778	ENSFHEG00000022954	trmt13	97	50.873	Fundulus_heteroclitus
ENSNLEG00000035917	TRMT13	95	48.791	ENSGMOG00000013223	trmt13	100	49.231	Gadus_morhua
ENSNLEG00000035917	TRMT13	95	65.275	ENSGALG00000005290	TRMT13	98	64.544	Gallus_gallus
ENSNLEG00000035917	TRMT13	85	56.383	ENSGAFG00000001577	trmt13	81	51.344	Gambusia_affinis
ENSNLEG00000035917	TRMT13	95	50.108	ENSGACG00000013428	trmt13	97	50.753	Gasterosteus_aculeatus
ENSNLEG00000035917	TRMT13	97	70.149	ENSGAGG00000023303	TRMT13	95	74.809	Gopherus_agassizii
ENSNLEG00000035917	TRMT13	100	99.083	ENSGGOG00000005616	TRMT13	100	98.545	Gorilla_gorilla
ENSNLEG00000035917	TRMT13	96	53.178	ENSHBUG00000007754	trmt13	99	53.178	Haplochromis_burtoni
ENSNLEG00000035917	TRMT13	100	90.826	ENSHGLG00000002164	TRMT13	99	90.966	Heterocephalus_glaber_female
ENSNLEG00000035917	TRMT13	100	90.826	ENSHGLG00100001618	TRMT13	99	90.966	Heterocephalus_glaber_male
ENSNLEG00000035917	TRMT13	98	47.569	ENSHCOG00000020553	trmt13	99	47.146	Hippocampus_comes
ENSNLEG00000035917	TRMT13	95	57.050	ENSIPUG00000024787	trmt13	98	58.009	Ictalurus_punctatus
ENSNLEG00000035917	TRMT13	100	93.347	ENSSTOG00000013483	TRMT13	100	93.347	Ictidomys_tridecemlineatus
ENSNLEG00000035917	TRMT13	99	88.235	ENSJJAG00000018012	Trmt13	100	87.708	Jaculus_jaculus
ENSNLEG00000035917	TRMT13	64	50.160	ENSKMAG00000007639	trmt13	92	50.160	Kryptolebias_marmoratus
ENSNLEG00000035917	TRMT13	87	64.211	ENSLBEG00000020238	trmt13	99	50.939	Labrus_bergylta
ENSNLEG00000035917	TRMT13	96	62.500	ENSLACG00000013153	TRMT13	100	61.443	Latimeria_chalumnae
ENSNLEG00000035917	TRMT13	86	69.149	ENSLOCG00000000418	trmt13	97	58.952	Lepisosteus_oculatus
ENSNLEG00000035917	TRMT13	77	88.378	ENSLAFG00000002383	TRMT13	100	88.378	Loxodonta_africana
ENSNLEG00000035917	TRMT13	100	97.921	ENSMFAG00000034681	TRMT13	100	97.921	Macaca_fascicularis
ENSNLEG00000035917	TRMT13	100	97.921	ENSMMUG00000004243	TRMT13	100	97.921	Macaca_mulatta
ENSNLEG00000035917	TRMT13	100	97.921	ENSMNEG00000036102	TRMT13	100	97.921	Macaca_nemestrina
ENSNLEG00000035917	TRMT13	100	97.713	ENSMLEG00000034258	TRMT13	100	97.713	Mandrillus_leucophaeus
ENSNLEG00000035917	TRMT13	96	51.266	ENSMAMG00000016597	trmt13	98	51.266	Mastacembelus_armatus
ENSNLEG00000035917	TRMT13	96	52.754	ENSMZEG00005020959	trmt13	99	52.754	Maylandia_zebra
ENSNLEG00000035917	TRMT13	89	66.042	ENSMGAG00000006970	TRMT13	100	66.042	Meleagris_gallopavo
ENSNLEG00000035917	TRMT13	100	83.486	ENSMAUG00000010448	Trmt13	99	83.958	Mesocricetus_auratus
ENSNLEG00000035917	TRMT13	100	93.347	ENSMICG00000005283	TRMT13	100	93.347	Microcebus_murinus
ENSNLEG00000035917	TRMT13	100	82.569	ENSMOCG00000019914	Trmt13	99	81.250	Microtus_ochrogaster
ENSNLEG00000035917	TRMT13	72	53.165	ENSMMOG00000007762	trmt13	89	50.566	Mola_mola
ENSNLEG00000035917	TRMT13	100	76.106	ENSMODG00000003646	TRMT13	100	75.464	Monodelphis_domestica
ENSNLEG00000035917	TRMT13	88	60.417	ENSMALG00000020965	trmt13	97	50.756	Monopterus_albus
ENSNLEG00000035917	TRMT13	99	87.963	MGP_CAROLIEiJ_G0025568	Trmt13	99	86.164	Mus_caroli
ENSNLEG00000035917	TRMT13	99	86.164	ENSMUSG00000033439	Trmt13	99	86.164	Mus_musculus
ENSNLEG00000035917	TRMT13	99	87.037	MGP_PahariEiJ_G0027014	Trmt13	99	87.002	Mus_pahari
ENSNLEG00000035917	TRMT13	99	87.037	MGP_SPRETEiJ_G0026518	Trmt13	99	86.164	Mus_spretus
ENSNLEG00000035917	TRMT13	100	88.991	ENSMPUG00000012169	-	98	87.970	Mustela_putorius_furo
ENSNLEG00000035917	TRMT13	79	88.451	ENSMPUG00000002078	-	100	88.451	Mustela_putorius_furo
ENSNLEG00000035917	TRMT13	100	89.908	ENSMLUG00000002124	TRMT13	100	79.002	Myotis_lucifugus
ENSNLEG00000035917	TRMT13	96	48.305	ENSNBRG00000006783	trmt13	95	49.784	Neolamprologus_brichardi
ENSNLEG00000035917	TRMT13	100	58.182	ENSMEUG00000013346	-	100	73.387	Notamacropus_eugenii
ENSNLEG00000035917	TRMT13	100	87.156	ENSOPRG00000012048	TRMT13	67	89.706	Ochotona_princeps
ENSNLEG00000035917	TRMT13	100	89.908	ENSODEG00000006075	-	95	90.419	Octodon_degus
ENSNLEG00000035917	TRMT13	96	53.178	ENSONIG00000004574	trmt13	99	53.178	Oreochromis_niloticus
ENSNLEG00000035917	TRMT13	89	74.246	ENSOANG00000012057	TRMT13	99	74.246	Ornithorhynchus_anatinus
ENSNLEG00000035917	TRMT13	100	91.476	ENSOCUG00000023095	TRMT13	100	91.476	Oryctolagus_cuniculus
ENSNLEG00000035917	TRMT13	96	48.517	ENSORLG00000003320	trmt13	99	49.153	Oryzias_latipes
ENSNLEG00000035917	TRMT13	95	48.180	ENSORLG00020005972	trmt13	97	48.428	Oryzias_latipes_hni
ENSNLEG00000035917	TRMT13	96	52.442	ENSORLG00015002270	trmt13	99	52.442	Oryzias_latipes_hsok
ENSNLEG00000035917	TRMT13	97	51.163	ENSOMEG00000006724	trmt13	95	51.797	Oryzias_melastigma
ENSNLEG00000035917	TRMT13	100	90.826	ENSOGAG00000005618	TRMT13	97	91.476	Otolemur_garnettii
ENSNLEG00000035917	TRMT13	100	90.437	ENSOARG00000017983	TRMT13	100	90.437	Ovis_aries
ENSNLEG00000035917	TRMT13	100	100.000	ENSPPAG00000043736	TRMT13	100	99.083	Pan_paniscus
ENSNLEG00000035917	TRMT13	100	91.268	ENSPPRG00000003424	TRMT13	100	91.268	Panthera_pardus
ENSNLEG00000035917	TRMT13	100	91.268	ENSPTIG00000018598	TRMT13	100	91.268	Panthera_tigris_altaica
ENSNLEG00000035917	TRMT13	100	100.000	ENSPTRG00000001001	TRMT13	100	99.083	Pan_troglodytes
ENSNLEG00000035917	TRMT13	100	98.337	ENSPANG00000007598	TRMT13	100	98.337	Papio_anubis
ENSNLEG00000035917	TRMT13	96	56.304	ENSPKIG00000001514	trmt13	98	56.304	Paramormyrops_kingsleyae
ENSNLEG00000035917	TRMT13	86	68.585	ENSPSIG00000012703	TRMT13	99	68.585	Pelodiscus_sinensis
ENSNLEG00000035917	TRMT13	85	64.516	ENSPMGG00000013298	trmt13	94	51.606	Periophthalmus_magnuspinnatus
ENSNLEG00000035917	TRMT13	100	82.569	ENSPEMG00000000275	Trmt13	99	83.125	Peromyscus_maniculatus_bairdii
ENSNLEG00000035917	TRMT13	88	55.000	ENSPMAG00000000823	trmt13	97	45.607	Petromyzon_marinus
ENSNLEG00000035917	TRMT13	99	75.468	ENSPCIG00000007699	TRMT13	99	76.091	Phascolarctos_cinereus
ENSNLEG00000035917	TRMT13	99	49.167	ENSPFOG00000008675	trmt13	99	49.167	Poecilia_formosa
ENSNLEG00000035917	TRMT13	95	49.257	ENSPLAG00000009709	trmt13	99	49.257	Poecilia_latipinna
ENSNLEG00000035917	TRMT13	95	47.650	ENSPMEG00000022954	trmt13	99	47.650	Poecilia_mexicana
ENSNLEG00000035917	TRMT13	88	56.000	ENSPREG00000005645	trmt13	91	50.360	Poecilia_reticulata
ENSNLEG00000035917	TRMT13	100	98.545	ENSPPYG00000001120	TRMT13	100	98.545	Pongo_abelii
ENSNLEG00000035917	TRMT13	100	87.734	ENSPCAG00000002340	TRMT13	100	87.734	Procavia_capensis
ENSNLEG00000035917	TRMT13	100	92.723	ENSPCOG00000017984	TRMT13	100	92.723	Propithecus_coquereli
ENSNLEG00000035917	TRMT13	100	91.476	ENSPVAG00000017430	TRMT13	100	91.476	Pteropus_vampyrus
ENSNLEG00000035917	TRMT13	96	51.483	ENSPNYG00000013690	trmt13	99	51.483	Pundamilia_nyererei
ENSNLEG00000035917	TRMT13	94	64.078	ENSPNAG00000022130	trmt13	99	55.180	Pygocentrus_nattereri
ENSNLEG00000035917	TRMT13	99	86.111	ENSRNOG00000015140	Trmt13	96	85.954	Rattus_norvegicus
ENSNLEG00000035917	TRMT13	100	98.545	ENSRBIG00000037686	TRMT13	100	98.545	Rhinopithecus_bieti
ENSNLEG00000035917	TRMT13	100	98.545	ENSRROG00000044057	TRMT13	100	98.545	Rhinopithecus_roxellana
ENSNLEG00000035917	TRMT13	100	98.165	ENSSBOG00000026541	TRMT13	100	98.165	Saimiri_boliviensis_boliviensis
ENSNLEG00000035917	TRMT13	91	76.888	ENSSHAG00000005213	TRMT13	97	76.888	Sarcophilus_harrisii
ENSNLEG00000035917	TRMT13	96	54.624	ENSSFOG00015017560	trmt13	98	54.624	Scleropages_formosus
ENSNLEG00000035917	TRMT13	83	64.444	ENSSMAG00000014592	trmt13	97	50.943	Scophthalmus_maximus
ENSNLEG00000035917	TRMT13	98	55.556	ENSSDUG00000015508	trmt13	99	50.101	Seriola_dumerili
ENSNLEG00000035917	TRMT13	98	55.556	ENSSLDG00000019060	trmt13	98	50.103	Seriola_lalandi_dorsalis
ENSNLEG00000035917	TRMT13	85	91.398	ENSSARG00000010344	TRMT13	97	76.840	Sorex_araneus
ENSNLEG00000035917	TRMT13	96	66.955	ENSSPUG00000016339	TRMT13	100	66.955	Sphenodon_punctatus
ENSNLEG00000035917	TRMT13	95	52.043	ENSSPAG00000011922	trmt13	98	52.128	Stegastes_partitus
ENSNLEG00000035917	TRMT13	100	90.852	ENSSSCG00000006869	TRMT13	100	90.852	Sus_scrofa
ENSNLEG00000035917	TRMT13	97	65.598	ENSTGUG00000005253	TRMT13	100	65.598	Taeniopygia_guttata
ENSNLEG00000035917	TRMT13	95	49.356	ENSTRUG00000008400	trmt13	99	49.367	Takifugu_rubripes
ENSNLEG00000035917	TRMT13	86	75.721	ENSTBEG00000008911	TRMT13	100	75.721	Tupaia_belangeri
ENSNLEG00000035917	TRMT13	70	98.684	ENSTTRG00000015302	-	60	98.684	Tursiops_truncatus
ENSNLEG00000035917	TRMT13	100	88.073	ENSUAMG00000017251	TRMT13	100	84.615	Ursus_americanus
ENSNLEG00000035917	TRMT13	100	89.908	ENSUMAG00000007901	TRMT13	100	89.813	Ursus_maritimus
ENSNLEG00000035917	TRMT13	90	73.148	ENSVPAG00000001034	TRMT13	100	73.148	Vicugna_pacos
ENSNLEG00000035917	TRMT13	99	91.060	ENSVVUG00000021996	TRMT13	99	91.060	Vulpes_vulpes
ENSNLEG00000035917	TRMT13	88	66.667	ENSXETG00000013204	trmt13	96	55.940	Xenopus_tropicalis
ENSNLEG00000035917	TRMT13	87	56.250	ENSXCOG00000008120	-	88	56.250	Xiphophorus_couchianus
ENSNLEG00000035917	TRMT13	95	48.305	ENSXMAG00000010765	trmt13	99	48.305	Xiphophorus_maculatus