EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOANG00000000817 (Gene tree)
Gene ID: -
Gene Symbol: SND1
Alias: -
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Plus strand
Length: 406542 bases
Position: chr10:3226907-3633448
Accession: 30646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000001266	TUDOR	PF00567.24	1.6e-27	1	1
ENSOANP00000001266	SNase	PF00565.17	4.5e-68	1	5
ENSOANP00000001266	SNase	PF00565.17	4.5e-68	2	5
ENSOANP00000001266	SNase	PF00565.17	4.5e-68	3	5
ENSOANP00000001266	SNase	PF00565.17	4.5e-68	4	5
ENSOANP00000001266	SNase	PF00565.17	4.5e-68	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000001267	SND1-201	2730	-	ENSOANP00000001266	909 (aa)	-	F6PLJ4

Gene Model

Click here to download ENSOANG00000000817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000000817's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000000817	SND1	99	93.534	ENSG00000197157	SND1	98	94.144	Homo_sapiens
ENSOANG00000000817	SND1	98	83.933	ENSAPOG00000017599	snd1	98	83.933	Acanthochromis_polyacanthus
ENSOANG00000000817	SND1	99	93.407	ENSAMEG00000004664	SND1	92	94.607	Ailuropoda_melanoleuca
ENSOANG00000000817	SND1	98	81.440	ENSACIG00000003551	snd1	98	81.440	Amphilophus_citrinellus
ENSOANG00000000817	SND1	98	83.708	ENSAOCG00000014166	snd1	98	83.708	Amphiprion_ocellaris
ENSOANG00000000817	SND1	98	83.708	ENSAPEG00000007067	snd1	98	83.708	Amphiprion_percula
ENSOANG00000000817	SND1	96	83.391	ENSATEG00000018475	snd1	87	83.391	Anabas_testudineus
ENSOANG00000000817	SND1	99	93.757	ENSANAG00000034463	SND1	99	94.683	Aotus_nancymaae
ENSOANG00000000817	SND1	98	83.596	ENSACLG00000022897	snd1	98	83.596	Astatotilapia_calliptera
ENSOANG00000000817	SND1	98	83.408	ENSAMXG00000016318	snd1	98	83.857	Astyanax_mexicanus
ENSOANG00000000817	SND1	99	93.757	ENSBTAG00000010692	SND1	98	94.369	Bos_taurus
ENSOANG00000000817	SND1	97	45.985	WBGene00006626	tsn-1	97	46.179	Caenorhabditis_elegans
ENSOANG00000000817	SND1	99	93.757	ENSCJAG00000017668	SND1	99	94.683	Callithrix_jacchus
ENSOANG00000000817	SND1	99	93.392	ENSCAFG00000001700	SND1	98	94.595	Canis_familiaris
ENSOANG00000000817	SND1	99	93.392	ENSCAFG00020021639	SND1	98	94.595	Canis_lupus_dingo
ENSOANG00000000817	SND1	99	93.980	ENSCHIG00000023390	SND1	98	94.802	Capra_hircus
ENSOANG00000000817	SND1	70	95.431	ENSTSYG00000004979	SND1	96	95.431	Carlito_syrichta
ENSOANG00000000817	SND1	99	82.000	ENSCAPG00000010677	SND1	97	81.320	Cavia_aperea
ENSOANG00000000817	SND1	99	93.311	ENSCPOG00000006251	SND1	98	93.919	Cavia_porcellus
ENSOANG00000000817	SND1	99	93.868	ENSCCAG00000036847	SND1	98	94.796	Cebus_capucinus
ENSOANG00000000817	SND1	99	93.868	ENSCATG00000035214	SND1	99	94.582	Cercocebus_atys
ENSOANG00000000817	SND1	99	93.868	ENSCLAG00000011796	SND1	98	94.482	Chinchilla_lanigera
ENSOANG00000000817	SND1	99	93.868	ENSCSAG00000010182	SND1	98	94.482	Chlorocebus_sabaeus
ENSOANG00000000817	SND1	78	84.314	ENSCHOG00000002218	SND1	86	84.314	Choloepus_hoffmanni
ENSOANG00000000817	SND1	98	93.806	ENSCPBG00000018094	SND1	98	93.806	Chrysemys_picta_bellii
ENSOANG00000000817	SND1	98	56.874	ENSCING00000000524	-	97	56.430	Ciona_intestinalis
ENSOANG00000000817	SND1	99	56.407	ENSCSAVG00000008807	-	97	56.887	Ciona_savignyi
ENSOANG00000000817	SND1	99	93.868	ENSCANG00000035119	SND1	98	94.482	Colobus_angolensis_palliatus
ENSOANG00000000817	SND1	99	92.865	ENSCGRG00001022514	Snd1	98	93.468	Cricetulus_griseus_chok1gshd
ENSOANG00000000817	SND1	97	93.778	ENSCGRG00000012277	Snd1	99	93.778	Cricetulus_griseus_crigri
ENSOANG00000000817	SND1	98	83.483	ENSCSEG00000008661	snd1	98	83.483	Cynoglossus_semilaevis
ENSOANG00000000817	SND1	99	82.967	ENSCVAG00000010316	snd1	100	83.103	Cyprinodon_variegatus
ENSOANG00000000817	SND1	98	84.287	ENSDARG00000006766	snd1	98	84.287	Danio_rerio
ENSOANG00000000817	SND1	97	91.874	ENSDNOG00000006795	SND1	99	91.874	Dasypus_novemcinctus
ENSOANG00000000817	SND1	99	93.645	ENSDORG00000000336	Snd1	98	94.257	Dipodomys_ordii
ENSOANG00000000817	SND1	98	50.595	FBgn0035121	Tudor-SN	97	50.710	Drosophila_melanogaster
ENSOANG00000000817	SND1	90	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSOANG00000000817	SND1	60	66.667	ENSEBUG00000014201	-	84	77.049	Eptatretus_burgeri
ENSOANG00000000817	SND1	99	92.442	ENSEASG00005008513	SND1	98	93.031	Equus_asinus_asinus
ENSOANG00000000817	SND1	99	93.980	ENSECAG00000011451	SND1	98	94.369	Equus_caballus
ENSOANG00000000817	SND1	99	83.166	ENSEEUG00000014737	SND1	91	93.345	Erinaceus_europaeus
ENSOANG00000000817	SND1	97	82.697	ENSELUG00000001805	snd1	94	82.697	Esox_lucius
ENSOANG00000000817	SND1	99	93.502	ENSFCAG00000008289	SND1	98	94.707	Felis_catus
ENSOANG00000000817	SND1	98	93.743	ENSFDAG00000015881	SND1	98	94.257	Fukomys_damarensis
ENSOANG00000000817	SND1	99	80.538	ENSFHEG00000004093	snd1	97	83.607	Fundulus_heteroclitus
ENSOANG00000000817	SND1	69	73.446	ENSGMOG00000018932	snd1	63	73.446	Gadus_morhua
ENSOANG00000000817	SND1	99	82.967	ENSGAFG00000008421	snd1	99	84.537	Gambusia_affinis
ENSOANG00000000817	SND1	99	53.362	ENSGACG00000019793	snd1	98	53.880	Gasterosteus_aculeatus
ENSOANG00000000817	SND1	99	93.757	ENSGGOG00000009614	SND1	99	94.683	Gorilla_gorilla
ENSOANG00000000817	SND1	99	82.269	ENSHBUG00000019135	snd1	98	83.596	Haplochromis_burtoni
ENSOANG00000000817	SND1	99	93.311	ENSHGLG00000003618	SND1	98	93.919	Heterocephalus_glaber_female
ENSOANG00000000817	SND1	99	93.245	ENSHGLG00100012449	SND1	98	93.919	Heterocephalus_glaber_male
ENSOANG00000000817	SND1	98	82.809	ENSHCOG00000005266	snd1	98	82.809	Hippocampus_comes
ENSOANG00000000817	SND1	98	82.314	ENSIPUG00000013279	snd1	98	82.848	Ictalurus_punctatus
ENSOANG00000000817	SND1	99	93.757	ENSSTOG00000002140	SND1	98	94.369	Ictidomys_tridecemlineatus
ENSOANG00000000817	SND1	99	93.980	ENSJJAG00000009561	Snd1	98	94.595	Jaculus_jaculus
ENSOANG00000000817	SND1	99	82.637	ENSKMAG00000016997	snd1	98	83.933	Kryptolebias_marmoratus
ENSOANG00000000817	SND1	99	84.041	ENSLBEG00000013563	snd1	98	82.584	Labrus_bergylta
ENSOANG00000000817	SND1	98	84.855	ENSLOCG00000015537	snd1	98	84.855	Lepisosteus_oculatus
ENSOANG00000000817	SND1	99	93.466	ENSLAFG00000009696	SND1	98	94.257	Loxodonta_africana
ENSOANG00000000817	SND1	99	93.868	ENSMFAG00000038114	SND1	99	94.582	Macaca_fascicularis
ENSOANG00000000817	SND1	99	93.868	ENSMMUG00000015432	SND1	98	94.482	Macaca_mulatta
ENSOANG00000000817	SND1	99	93.868	ENSMNEG00000039808	SND1	99	94.796	Macaca_nemestrina
ENSOANG00000000817	SND1	99	93.757	ENSMLEG00000029040	SND1	99	94.683	Mandrillus_leucophaeus
ENSOANG00000000817	SND1	98	83.258	ENSMAMG00000011739	snd1	98	83.258	Mastacembelus_armatus
ENSOANG00000000817	SND1	98	83.596	ENSMZEG00005005681	snd1	98	83.596	Maylandia_zebra
ENSOANG00000000817	SND1	99	93.757	ENSMICG00000000097	SND1	98	94.369	Microcebus_murinus
ENSOANG00000000817	SND1	99	93.534	ENSMOCG00000005040	Snd1	98	94.144	Microtus_ochrogaster
ENSOANG00000000817	SND1	98	83.258	ENSMMOG00000001795	snd1	98	83.258	Mola_mola
ENSOANG00000000817	SND1	99	94.426	ENSMODG00000015182	SND1	98	95.158	Monodelphis_domestica
ENSOANG00000000817	SND1	98	83.146	ENSMALG00000012071	snd1	98	83.146	Monopterus_albus
ENSOANG00000000817	SND1	98	93.408	MGP_CAROLIEiJ_G0028159	Snd1	98	93.919	Mus_caroli
ENSOANG00000000817	SND1	98	93.296	ENSMUSG00000001424	Snd1	98	93.806	Mus_musculus
ENSOANG00000000817	SND1	98	93.296	MGP_PahariEiJ_G0021917	Snd1	98	93.806	Mus_pahari
ENSOANG00000000817	SND1	98	93.408	MGP_SPRETEiJ_G0029159	Snd1	98	93.919	Mus_spretus
ENSOANG00000000817	SND1	99	93.062	ENSMPUG00000006545	SND1	98	93.581	Mustela_putorius_furo
ENSOANG00000000817	SND1	97	93.184	ENSMLUG00000017130	SND1	99	93.184	Myotis_lucifugus
ENSOANG00000000817	SND1	99	93.423	ENSNGAG00000011186	Snd1	98	94.032	Nannospalax_galili
ENSOANG00000000817	SND1	98	83.483	ENSNBRG00000006681	snd1	98	83.483	Neolamprologus_brichardi
ENSOANG00000000817	SND1	99	93.282	ENSNLEG00000012263	SND1	99	94.683	Nomascus_leucogenys
ENSOANG00000000817	SND1	91	100.000	ENSOPRG00000013405	SND1	90	100.000	Ochotona_princeps
ENSOANG00000000817	SND1	99	94.091	ENSODEG00000011502	SND1	98	94.707	Octodon_degus
ENSOANG00000000817	SND1	98	83.483	ENSONIG00000011481	snd1	95	83.483	Oreochromis_niloticus
ENSOANG00000000817	SND1	99	92.731	ENSOCUG00000001620	SND1	98	93.919	Oryctolagus_cuniculus
ENSOANG00000000817	SND1	98	83.034	ENSORLG00000015201	snd1	98	83.034	Oryzias_latipes
ENSOANG00000000817	SND1	98	83.146	ENSORLG00020013991	snd1	98	83.146	Oryzias_latipes_hni
ENSOANG00000000817	SND1	98	83.146	ENSORLG00015012436	snd1	98	83.146	Oryzias_latipes_hsok
ENSOANG00000000817	SND1	98	83.596	ENSOMEG00000006406	snd1	98	83.596	Oryzias_melastigma
ENSOANG00000000817	SND1	99	93.437	ENSOGAG00000013356	SND1	92	94.045	Otolemur_garnettii
ENSOANG00000000817	SND1	97	92.308	ENSOARG00000002149	SND1	99	92.308	Ovis_aries
ENSOANG00000000817	SND1	99	93.645	ENSPPAG00000042947	SND1	99	94.570	Pan_paniscus
ENSOANG00000000817	SND1	99	93.502	ENSPPRG00000004494	SND1	98	94.707	Panthera_pardus
ENSOANG00000000817	SND1	99	93.392	ENSPTIG00000014214	SND1	98	94.595	Panthera_tigris_altaica
ENSOANG00000000817	SND1	99	93.645	ENSPTRG00000023911	SND1	99	94.570	Pan_troglodytes
ENSOANG00000000817	SND1	97	94.582	ENSPANG00000011997	SND1	99	94.582	Papio_anubis
ENSOANG00000000817	SND1	98	81.159	ENSPKIG00000023494	snd1	98	81.159	Paramormyrops_kingsleyae
ENSOANG00000000817	SND1	92	82.395	ENSPMGG00000003629	snd1	100	82.395	Periophthalmus_magnuspinnatus
ENSOANG00000000817	SND1	99	93.423	ENSPEMG00000010240	Snd1	98	94.032	Peromyscus_maniculatus_bairdii
ENSOANG00000000817	SND1	97	74.011	ENSPMAG00000007915	-	99	73.785	Petromyzon_marinus
ENSOANG00000000817	SND1	99	94.537	ENSPCIG00000011561	SND1	98	95.270	Phascolarctos_cinereus
ENSOANG00000000817	SND1	99	82.418	ENSPFOG00000001557	snd1	98	83.708	Poecilia_formosa
ENSOANG00000000817	SND1	99	82.418	ENSPLAG00000018459	snd1	95	83.708	Poecilia_latipinna
ENSOANG00000000817	SND1	99	82.637	ENSPMEG00000006803	snd1	98	83.933	Poecilia_mexicana
ENSOANG00000000817	SND1	99	82.527	ENSPREG00000002189	snd1	98	83.820	Poecilia_reticulata
ENSOANG00000000817	SND1	92	93.190	ENSPPYG00000017972	SND1	97	93.878	Pongo_abelii
ENSOANG00000000817	SND1	99	82.609	ENSPCAG00000011305	SND1	98	83.108	Procavia_capensis
ENSOANG00000000817	SND1	99	93.645	ENSPCOG00000026791	SND1	99	94.570	Propithecus_coquereli
ENSOANG00000000817	SND1	99	91.862	ENSPVAG00000013945	SND1	98	92.455	Pteropus_vampyrus
ENSOANG00000000817	SND1	98	83.596	ENSPNYG00000000932	snd1	98	83.596	Pundamilia_nyererei
ENSOANG00000000817	SND1	99	83.000	ENSPNAG00000001206	snd1	98	83.632	Pygocentrus_nattereri
ENSOANG00000000817	SND1	98	93.184	ENSRNOG00000031173	Snd1	99	92.873	Rattus_norvegicus
ENSOANG00000000817	SND1	73	95.292	ENSRBIG00000027782	-	93	95.247	Rhinopithecus_bieti
ENSOANG00000000817	SND1	99	93.868	ENSRROG00000033020	SND1	98	94.482	Rhinopithecus_roxellana
ENSOANG00000000817	SND1	99	93.757	ENSSBOG00000032461	SND1	99	94.683	Saimiri_boliviensis_boliviensis
ENSOANG00000000817	SND1	98	92.230	ENSSHAG00000015359	SND1	100	92.230	Sarcophilus_harrisii
ENSOANG00000000817	SND1	98	82.832	ENSSFOG00015001103	snd1	98	82.832	Scleropages_formosus
ENSOANG00000000817	SND1	98	83.146	ENSSMAG00000001932	snd1	92	83.146	Scophthalmus_maximus
ENSOANG00000000817	SND1	98	84.045	ENSSDUG00000002699	snd1	91	84.045	Seriola_dumerili
ENSOANG00000000817	SND1	98	76.742	ENSSLDG00000001950	snd1	98	76.742	Seriola_lalandi_dorsalis
ENSOANG00000000817	SND1	86	96.226	ENSSARG00000004877	SND1	92	96.226	Sorex_araneus
ENSOANG00000000817	SND1	73	88.715	ENSSPUG00000017586	SND1	96	88.715	Sphenodon_punctatus
ENSOANG00000000817	SND1	70	86.116	ENSSPAG00000021398	snd1	95	86.116	Stegastes_partitus
ENSOANG00000000817	SND1	99	93.757	ENSSSCG00000016590	SND1	98	94.369	Sus_scrofa
ENSOANG00000000817	SND1	99	81.711	ENSTRUG00000014067	snd1	98	82.584	Takifugu_rubripes
ENSOANG00000000817	SND1	99	82.088	ENSTNIG00000011019	snd1	98	83.371	Tetraodon_nigroviridis
ENSOANG00000000817	SND1	93	88.443	ENSTBEG00000003999	SND1	100	88.443	Tupaia_belangeri
ENSOANG00000000817	SND1	99	89.521	ENSTTRG00000006059	SND1	98	90.090	Tursiops_truncatus
ENSOANG00000000817	SND1	91	95.437	ENSUAMG00000005604	-	93	95.437	Ursus_americanus
ENSOANG00000000817	SND1	70	80.779	ENSUAMG00000002820	-	84	83.014	Ursus_americanus
ENSOANG00000000817	SND1	99	93.282	ENSUMAG00000005960	SND1	98	94.482	Ursus_maritimus
ENSOANG00000000817	SND1	73	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSOANG00000000817	SND1	99	93.392	ENSVVUG00000007226	SND1	98	94.595	Vulpes_vulpes
ENSOANG00000000817	SND1	97	85.198	ENSXETG00000023043	snd1	100	85.126	Xenopus_tropicalis
ENSOANG00000000817	SND1	92	81.116	ENSXCOG00000013629	snd1	99	81.116	Xiphophorus_couchianus
ENSOANG00000000817	SND1	99	82.967	ENSXMAG00000011469	snd1	98	84.270	Xiphophorus_maculatus