EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOANG00000001043 (Gene tree)
Gene ID: 100075850
Gene Symbol: PRDM12
Alias: -
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Minus strand
Length: 12536 bases
Position: chr4:20628258-20640793
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000001663	zf-C2H2	PF00096.26	3.5e-13	1	2
ENSOANP00000001663	zf-C2H2	PF00096.26	3.5e-13	2	2
ENSOANP00000001663	zf-met	PF12874.7	9.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000001664	PRDM12-201	654	XM_007662380	ENSOANP00000001663	217 (aa)	XP_007660570	F6QCJ0

Gene Model

Click here to download ENSOANG00000001043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000001043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOANG00000001043	PRDM12	53	42.045	ENSOANG00000010666	-	71	42.045
ENSOANG00000001043	PRDM12	58	42.857	ENSOANG00000010668	-	98	42.857
ENSOANG00000001043	PRDM12	52	37.647	ENSOANG00000001250	OVOL2	88	37.647
ENSOANG00000001043	PRDM12	56	43.210	ENSOANG00000005971	-	64	43.210
ENSOANG00000001043	PRDM12	98	38.889	ENSOANG00000015109	PRDM5	86	38.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000001043	PRDM12	91	95.431	ENSG00000130711	PRDM12	63	87.391	Homo_sapiens
ENSOANG00000001043	PRDM12	100	72.764	ENSAPOG00000016051	prdm12b	64	73.171	Acanthochromis_polyacanthus
ENSOANG00000001043	PRDM12	76	73.889	ENSAPOG00000018234	-	58	75.138	Acanthochromis_polyacanthus
ENSOANG00000001043	PRDM12	87	89.894	ENSAMEG00000016234	PRDM12	58	89.894	Ailuropoda_melanoleuca
ENSOANG00000001043	PRDM12	100	79.565	ENSACIG00000005193	-	61	79.565	Amphilophus_citrinellus
ENSOANG00000001043	PRDM12	100	74.895	ENSACIG00000019578	prdm12b	63	75.314	Amphilophus_citrinellus
ENSOANG00000001043	PRDM12	100	74.380	ENSAOCG00000015040	prdm12b	63	75.207	Amphiprion_ocellaris
ENSOANG00000001043	PRDM12	100	72.034	ENSAPEG00000022849	-	60	73.729	Amphiprion_percula
ENSOANG00000001043	PRDM12	100	75.314	ENSAPEG00000015092	prdm12b	63	76.151	Amphiprion_percula
ENSOANG00000001043	PRDM12	100	73.790	ENSATEG00000014595	-	65	75.403	Anabas_testudineus
ENSOANG00000001043	PRDM12	94	95.567	ENSANAG00000020616	PRDM12	60	95.567	Aotus_nancymaae
ENSOANG00000001043	PRDM12	100	78.667	ENSACLG00000011876	prdm12b	61	78.667	Astatotilapia_calliptera
ENSOANG00000001043	PRDM12	100	74.194	ENSACLG00000007631	-	63	75.806	Astatotilapia_calliptera
ENSOANG00000001043	PRDM12	100	81.197	ENSAMXG00000033665	prdm12b	63	83.333	Astyanax_mexicanus
ENSOANG00000001043	PRDM12	100	78.125	ENSAMXG00000008540	PRDM12	62	78.125	Astyanax_mexicanus
ENSOANG00000001043	PRDM12	91	96.447	ENSBTAG00000023797	PRDM12	62	90.625	Bos_taurus
ENSOANG00000001043	PRDM12	91	95.939	ENSCJAG00000020540	PRDM12	62	90.583	Callithrix_jacchus
ENSOANG00000001043	PRDM12	91	96.954	ENSCAFG00000023076	PRDM12	70	89.868	Canis_familiaris
ENSOANG00000001043	PRDM12	91	96.954	ENSCAFG00020024046	PRDM12	62	89.868	Canis_lupus_dingo
ENSOANG00000001043	PRDM12	91	96.954	ENSCHIG00000025005	PRDM12	62	90.667	Capra_hircus
ENSOANG00000001043	PRDM12	81	96.591	ENSCPOG00000005901	PRDM12	53	96.591	Cavia_porcellus
ENSOANG00000001043	PRDM12	91	95.939	ENSCCAG00000037485	PRDM12	62	89.381	Cebus_capucinus
ENSOANG00000001043	PRDM12	91	95.939	ENSCATG00000020327	PRDM12	62	89.381	Cercocebus_atys
ENSOANG00000001043	PRDM12	91	96.447	ENSCLAG00000005499	PRDM12	54	96.447	Chinchilla_lanigera
ENSOANG00000001043	PRDM12	91	95.939	ENSCSAG00000014756	PRDM12	62	88.987	Chlorocebus_sabaeus
ENSOANG00000001043	PRDM12	100	95.392	ENSCPBG00000022628	PRDM12	61	95.392	Chrysemys_picta_bellii
ENSOANG00000001043	PRDM12	91	96.447	ENSCGRG00001015005	Prdm12	63	88.646	Cricetulus_griseus_chok1gshd
ENSOANG00000001043	PRDM12	100	72.177	ENSCVAG00000000944	-	64	73.387	Cyprinodon_variegatus
ENSOANG00000001043	PRDM12	100	75.745	ENSCVAG00000017166	prdm12b	63	76.596	Cyprinodon_variegatus
ENSOANG00000001043	PRDM12	100	85.217	ENSDARG00000007430	prdm12b	63	85.217	Danio_rerio
ENSOANG00000001043	PRDM12	91	96.447	ENSDNOG00000042302	PRDM12	62	91.071	Dasypus_novemcinctus
ENSOANG00000001043	PRDM12	100	63.745	ENSEBUG00000016780	prdm12b	56	63.745	Eptatretus_burgeri
ENSOANG00000001043	PRDM12	94	96.059	ENSEASG00005008472	PRDM12	62	90.222	Equus_asinus_asinus
ENSOANG00000001043	PRDM12	94	95.567	ENSECAG00000005933	PRDM12	62	89.778	Equus_caballus
ENSOANG00000001043	PRDM12	100	77.232	ENSELUG00000013674	PRDM12	64	73.750	Esox_lucius
ENSOANG00000001043	PRDM12	100	80.851	ENSELUG00000009905	prdm12b	64	80.851	Esox_lucius
ENSOANG00000001043	PRDM12	91	96.954	ENSFCAG00000043086	PRDM12	62	90.265	Felis_catus
ENSOANG00000001043	PRDM12	100	96.313	ENSFALG00000001445	PRDM12	55	96.313	Ficedula_albicollis
ENSOANG00000001043	PRDM12	100	78.390	ENSFHEG00000007746	-	61	78.390	Fundulus_heteroclitus
ENSOANG00000001043	PRDM12	100	75.319	ENSFHEG00000003944	prdm12b	63	77.021	Fundulus_heteroclitus
ENSOANG00000001043	PRDM12	100	79.358	ENSGMOG00000011797	prdm12b	61	79.358	Gadus_morhua
ENSOANG00000001043	PRDM12	100	96.313	ENSGALG00000003895	PRDM12	62	96.313	Gallus_gallus
ENSOANG00000001043	PRDM12	100	74.790	ENSGAFG00000010827	prdm12b	63	76.891	Gambusia_affinis
ENSOANG00000001043	PRDM12	100	76.596	ENSGACG00000016713	prdm12b	63	76.596	Gasterosteus_aculeatus
ENSOANG00000001043	PRDM12	100	95.392	ENSGAGG00000014083	PRDM12	61	95.392	Gopherus_agassizii
ENSOANG00000001043	PRDM12	91	94.924	ENSGGOG00000010568	PRDM12	63	87.336	Gorilla_gorilla
ENSOANG00000001043	PRDM12	100	76.695	ENSHBUG00000022878	prdm12b	63	76.695	Haplochromis_burtoni
ENSOANG00000001043	PRDM12	100	74.194	ENSHBUG00000022537	-	58	75.806	Haplochromis_burtoni
ENSOANG00000001043	PRDM12	91	95.939	ENSHGLG00000013939	PRDM12	62	88.158	Heterocephalus_glaber_female
ENSOANG00000001043	PRDM12	87	80.788	ENSHCOG00000003663	prdm12b	65	70.751	Hippocampus_comes
ENSOANG00000001043	PRDM12	100	76.959	ENSHCOG00000021167	-	59	76.959	Hippocampus_comes
ENSOANG00000001043	PRDM12	100	82.328	ENSIPUG00000017053	prdm12b	63	83.190	Ictalurus_punctatus
ENSOANG00000001043	PRDM12	100	77.632	ENSIPUG00000019544	PRDM12	65	77.632	Ictalurus_punctatus
ENSOANG00000001043	PRDM12	93	97.015	ENSSTOG00000005986	PRDM12	53	97.015	Ictidomys_tridecemlineatus
ENSOANG00000001043	PRDM12	89	97.409	ENSJJAG00000005424	Prdm12	58	97.409	Jaculus_jaculus
ENSOANG00000001043	PRDM12	100	82.110	ENSKMAG00000021205	-	59	82.110	Kryptolebias_marmoratus
ENSOANG00000001043	PRDM12	100	67.164	ENSKMAG00000016921	prdm12b	66	67.910	Kryptolebias_marmoratus
ENSOANG00000001043	PRDM12	100	73.554	ENSLBEG00000017769	prdm12b	64	74.793	Labrus_bergylta
ENSOANG00000001043	PRDM12	100	74.699	ENSLBEG00000007776	-	64	74.793	Labrus_bergylta
ENSOANG00000001043	PRDM12	100	90.783	ENSLACG00000017560	PRDM12	61	90.783	Latimeria_chalumnae
ENSOANG00000001043	PRDM12	100	85.463	ENSLOCG00000005429	prdm12b	62	85.903	Lepisosteus_oculatus
ENSOANG00000001043	PRDM12	94	93.810	ENSLAFG00000006979	PRDM12	56	93.810	Loxodonta_africana
ENSOANG00000001043	PRDM12	100	85.217	ENSMFAG00000040322	PRDM12	63	87.826	Macaca_fascicularis
ENSOANG00000001043	PRDM12	91	95.939	ENSMNEG00000037234	PRDM12	62	89.381	Macaca_nemestrina
ENSOANG00000001043	PRDM12	100	75.314	ENSMAMG00000013212	prdm12b	64	76.151	Mastacembelus_armatus
ENSOANG00000001043	PRDM12	100	74.583	ENSMAMG00000018988	-	61	75.833	Mastacembelus_armatus
ENSOANG00000001043	PRDM12	100	73.600	ENSMZEG00005000415	PRDM12	63	75.200	Maylandia_zebra
ENSOANG00000001043	PRDM12	97	96.209	ENSMGAG00000005438	PRDM12	60	96.209	Meleagris_gallopavo
ENSOANG00000001043	PRDM12	100	88.596	ENSMAUG00000013040	Prdm12	62	88.596	Mesocricetus_auratus
ENSOANG00000001043	PRDM12	94	96.078	ENSMICG00000015480	PRDM12	62	90.222	Microcebus_murinus
ENSOANG00000001043	PRDM12	99	92.093	ENSMOCG00000021026	Prdm12	56	96.078	Microtus_ochrogaster
ENSOANG00000001043	PRDM12	100	97.706	ENSMODG00000012108	PRDM12	61	97.706	Monodelphis_domestica
ENSOANG00000001043	PRDM12	100	77.021	ENSMALG00000021901	prdm12b	73	77.021	Monopterus_albus
ENSOANG00000001043	PRDM12	91	95.939	MGP_CAROLIEiJ_G0023414	Prdm12	62	88.596	Mus_caroli
ENSOANG00000001043	PRDM12	91	95.939	ENSMUSG00000079466	Prdm12	62	88.596	Mus_musculus
ENSOANG00000001043	PRDM12	91	95.939	MGP_PahariEiJ_G0024871	Prdm12	62	88.596	Mus_pahari
ENSOANG00000001043	PRDM12	91	95.939	MGP_SPRETEiJ_G0024331	Prdm12	62	88.596	Mus_spretus
ENSOANG00000001043	PRDM12	88	96.842	ENSNGAG00000018480	Prdm12	61	88.688	Nannospalax_galili
ENSOANG00000001043	PRDM12	100	75.314	ENSNBRG00000006727	prdm12b	63	75.732	Neolamprologus_brichardi
ENSOANG00000001043	PRDM12	100	83.028	ENSNBRG00000024312	-	62	83.028	Neolamprologus_brichardi
ENSOANG00000001043	PRDM12	100	80.275	ENSMEUG00000003828	PRDM12	61	80.275	Notamacropus_eugenii
ENSOANG00000001043	PRDM12	89	96.373	ENSOPRG00000008680	PRDM12	58	96.373	Ochotona_princeps
ENSOANG00000001043	PRDM12	92	92.965	ENSOCUG00000008241	PRDM12	64	92.965	Oryctolagus_cuniculus
ENSOANG00000001043	PRDM12	100	72.691	ENSORLG00000017558	-	64	74.699	Oryzias_latipes
ENSOANG00000001043	PRDM12	100	73.859	ENSORLG00000007114	prdm12b	64	74.274	Oryzias_latipes
ENSOANG00000001043	PRDM12	100	72.400	ENSORLG00020013167	-	64	74.400	Oryzias_latipes_hni
ENSOANG00000001043	PRDM12	100	71.605	ENSORLG00020019565	prdm12b	64	74.590	Oryzias_latipes_hni
ENSOANG00000001043	PRDM12	100	72.691	ENSORLG00015003435	-	64	74.699	Oryzias_latipes_hsok
ENSOANG00000001043	PRDM12	100	72.500	ENSORLG00015007621	prdm12b	63	74.583	Oryzias_latipes_hsok
ENSOANG00000001043	PRDM12	100	80.519	ENSOMEG00000007762	-	61	80.519	Oryzias_melastigma
ENSOANG00000001043	PRDM12	100	72.541	ENSOMEG00000004134	prdm12b	64	74.390	Oryzias_melastigma
ENSOANG00000001043	PRDM12	90	96.939	ENSOGAG00000007557	PRDM12	59	96.939	Otolemur_garnettii
ENSOANG00000001043	PRDM12	69	95.333	ENSPPAG00000031506	-	51	95.333	Pan_paniscus
ENSOANG00000001043	PRDM12	100	78.829	ENSPPRG00000023024	PRDM12	56	78.829	Panthera_pardus
ENSOANG00000001043	PRDM12	91	95.431	ENSPTRG00000021475	PRDM12	63	87.773	Pan_troglodytes
ENSOANG00000001043	PRDM12	91	95.431	ENSPTRG00000043324	-	63	87.773	Pan_troglodytes
ENSOANG00000001043	PRDM12	91	95.939	ENSPANG00000025967	PRDM12	62	89.381	Papio_anubis
ENSOANG00000001043	PRDM12	100	81.780	ENSPKIG00000007228	prdm12b	63	82.203	Paramormyrops_kingsleyae
ENSOANG00000001043	PRDM12	94	75.701	ENSPKIG00000004305	PRDM12	60	75.234	Paramormyrops_kingsleyae
ENSOANG00000001043	PRDM12	100	95.392	ENSPSIG00000006739	PRDM12	61	95.392	Pelodiscus_sinensis
ENSOANG00000001043	PRDM12	100	72.314	ENSPMGG00000002356	-	63	73.554	Periophthalmus_magnuspinnatus
ENSOANG00000001043	PRDM12	100	76.496	ENSPMGG00000008867	prdm12b	63	77.778	Periophthalmus_magnuspinnatus
ENSOANG00000001043	PRDM12	90	96.410	ENSPEMG00000009969	Prdm12	54	96.410	Peromyscus_maniculatus_bairdii
ENSOANG00000001043	PRDM12	100	97.706	ENSPCIG00000024119	PRDM12	61	97.706	Phascolarctos_cinereus
ENSOANG00000001043	PRDM12	100	77.682	ENSPFOG00000019841	prdm12b	63	77.682	Poecilia_formosa
ENSOANG00000001043	PRDM12	100	73.444	ENSPLAG00000016626	prdm12b	64	75.519	Poecilia_latipinna
ENSOANG00000001043	PRDM12	100	73.859	ENSPMEG00000016698	prdm12b	65	75.519	Poecilia_mexicana
ENSOANG00000001043	PRDM12	100	79.724	ENSPREG00000003211	-	58	79.724	Poecilia_reticulata
ENSOANG00000001043	PRDM12	100	73.140	ENSPREG00000015073	prdm12b	64	75.207	Poecilia_reticulata
ENSOANG00000001043	PRDM12	95	93.237	ENSPPYG00000019694	PRDM12	59	93.237	Pongo_abelii
ENSOANG00000001043	PRDM12	91	96.954	ENSPCOG00000022255	PRDM12	63	89.520	Propithecus_coquereli
ENSOANG00000001043	PRDM12	91	96.954	ENSPVAG00000001511	PRDM12	63	89.520	Pteropus_vampyrus
ENSOANG00000001043	PRDM12	100	76.050	ENSPNYG00000009607	prdm12b	63	76.050	Pundamilia_nyererei
ENSOANG00000001043	PRDM12	100	73.600	ENSPNYG00000013589	-	63	75.200	Pundamilia_nyererei
ENSOANG00000001043	PRDM12	100	74.026	ENSPNAG00000013396	PRDM12	61	74.783	Pygocentrus_nattereri
ENSOANG00000001043	PRDM12	100	82.328	ENSPNAG00000024532	prdm12b	63	84.914	Pygocentrus_nattereri
ENSOANG00000001043	PRDM12	91	95.939	ENSRNOG00000009218	Prdm12	62	88.596	Rattus_norvegicus
ENSOANG00000001043	PRDM12	83	96.667	ENSRBIG00000042712	PRDM12	61	84.091	Rhinopithecus_bieti
ENSOANG00000001043	PRDM12	85	96.739	ENSRROG00000043554	PRDM12	57	96.739	Rhinopithecus_roxellana
ENSOANG00000001043	PRDM12	100	96.789	ENSSHAG00000015972	PRDM12	61	96.789	Sarcophilus_harrisii
ENSOANG00000001043	PRDM12	100	70.120	ENSSMAG00000003754	prdm12b	65	70.916	Scophthalmus_maximus
ENSOANG00000001043	PRDM12	94	81.863	ENSSDUG00000019071	-	66	75.610	Seriola_dumerili
ENSOANG00000001043	PRDM12	100	74.694	ENSSDUG00000023498	prdm12b	64	75.102	Seriola_dumerili
ENSOANG00000001043	PRDM12	100	75.207	ENSSLDG00000009557	prdm12b	64	75.620	Seriola_lalandi_dorsalis
ENSOANG00000001043	PRDM12	100	82.192	ENSSLDG00000013562	-	61	82.192	Seriola_lalandi_dorsalis
ENSOANG00000001043	PRDM12	100	95.392	ENSSPUG00000013424	PRDM12	61	95.392	Sphenodon_punctatus
ENSOANG00000001043	PRDM12	100	61.044	ENSSPAG00000022420	-	64	65.532	Stegastes_partitus
ENSOANG00000001043	PRDM12	100	74.486	ENSSPAG00000018824	prdm12b	63	75.309	Stegastes_partitus
ENSOANG00000001043	PRDM12	91	96.954	ENSSSCG00000005703	PRDM12	62	89.868	Sus_scrofa
ENSOANG00000001043	PRDM12	100	78.448	ENSTRUG00000018659	prdm12b	63	78.448	Takifugu_rubripes
ENSOANG00000001043	PRDM12	100	79.279	ENSTRUG00000013239	-	61	79.279	Takifugu_rubripes
ENSOANG00000001043	PRDM12	100	76.724	ENSTNIG00000009020	prdm12b	62	77.155	Tetraodon_nigroviridis
ENSOANG00000001043	PRDM12	100	77.880	ENSTNIG00000005859	-	59	77.880	Tetraodon_nigroviridis
ENSOANG00000001043	PRDM12	91	96.954	ENSUAMG00000009653	PRDM12	57	95.588	Ursus_americanus
ENSOANG00000001043	PRDM12	100	75.000	ENSXCOG00000002836	prdm12b	63	76.695	Xiphophorus_couchianus
ENSOANG00000001043	PRDM12	100	74.059	ENSXMAG00000005537	prdm12b	64	75.732	Xiphophorus_maculatus
ENSOANG00000001043	PRDM12	100	74.684	ENSXMAG00000028012	-	62	75.949	Xiphophorus_maculatus