EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOANG00000001556 (Gene tree)
Gene ID: -
Gene Symbol: TRUB1
Alias: -
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Plus strand
Length: 21654 bases
Position: chrUltra272:7158202-7179855
Accession: 16060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000002480	TruB_N	PF01509.18	4.1e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000002481	TRUB1-201	1270	XM_001513822	ENSOANP00000002480	303 (aa)	XP_001513872	F7GD04

Gene Model

Click here to download ENSOANG00000001556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000001556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000001556	TRUB1	96	75.685	ENSG00000165832	TRUB1	78	79.927	Homo_sapiens
ENSOANG00000001556	TRUB1	80	69.421	ENSAPOG00000020565	trub1	90	68.421	Acanthochromis_polyacanthus
ENSOANG00000001556	TRUB1	93	77.193	ENSAMEG00000014931	TRUB1	78	79.348	Ailuropoda_melanoleuca
ENSOANG00000001556	TRUB1	82	62.753	ENSACIG00000003060	trub1	82	62.753	Amphilophus_citrinellus
ENSOANG00000001556	TRUB1	80	69.421	ENSAOCG00000017188	trub1	90	68.421	Amphiprion_ocellaris
ENSOANG00000001556	TRUB1	82	68.000	ENSAPEG00000015209	trub1	90	68.016	Amphiprion_percula
ENSOANG00000001556	TRUB1	80	70.248	ENSATEG00000023291	trub1	87	70.248	Anabas_testudineus
ENSOANG00000001556	TRUB1	92	77.338	ENSAPLG00000006808	TRUB1	98	78.388	Anas_platyrhynchos
ENSOANG00000001556	TRUB1	89	67.159	ENSACAG00000009282	TRUB1	98	67.159	Anolis_carolinensis
ENSOANG00000001556	TRUB1	93	78.092	ENSANAG00000022870	TRUB1	78	80.292	Aotus_nancymaae
ENSOANG00000001556	TRUB1	85	66.279	ENSACLG00000000823	trub1	92	66.406	Astatotilapia_calliptera
ENSOANG00000001556	TRUB1	88	63.806	ENSAMXG00000015845	trub1	88	64.259	Astyanax_mexicanus
ENSOANG00000001556	TRUB1	93	78.445	ENSBTAG00000012955	TRUB1	78	80.657	Bos_taurus
ENSOANG00000001556	TRUB1	93	78.092	ENSCJAG00000047815	TRUB1	78	80.292	Callithrix_jacchus
ENSOANG00000001556	TRUB1	90	81.022	ENSCAFG00000011688	TRUB1	78	81.022	Canis_familiaris
ENSOANG00000001556	TRUB1	90	81.022	ENSCAFG00020013237	TRUB1	78	81.022	Canis_lupus_dingo
ENSOANG00000001556	TRUB1	93	78.092	ENSCHIG00000020884	TRUB1	82	80.292	Capra_hircus
ENSOANG00000001556	TRUB1	93	77.385	ENSTSYG00000000446	TRUB1	78	79.562	Carlito_syrichta
ENSOANG00000001556	TRUB1	78	70.042	ENSCAPG00000017088	TRUB1	93	70.042	Cavia_aperea
ENSOANG00000001556	TRUB1	67	76.733	ENSCPOG00000030129	-	73	80.214	Cavia_porcellus
ENSOANG00000001556	TRUB1	61	80.978	ENSCPOG00000040236	-	75	80.978	Cavia_porcellus
ENSOANG00000001556	TRUB1	93	78.092	ENSCCAG00000028842	TRUB1	78	80.292	Cebus_capucinus
ENSOANG00000001556	TRUB1	93	77.739	ENSCATG00000033431	TRUB1	78	79.927	Cercocebus_atys
ENSOANG00000001556	TRUB1	64	75.897	ENSCLAG00000008664	TRUB1	76	79.032	Chinchilla_lanigera
ENSOANG00000001556	TRUB1	93	78.092	ENSCSAG00000004891	TRUB1	78	80.292	Chlorocebus_sabaeus
ENSOANG00000001556	TRUB1	93	67.491	ENSCHOG00000011931	TRUB1	79	69.343	Choloepus_hoffmanni
ENSOANG00000001556	TRUB1	97	75.510	ENSCPBG00000003051	TRUB1	94	79.197	Chrysemys_picta_bellii
ENSOANG00000001556	TRUB1	93	78.092	ENSCANG00000029445	TRUB1	78	80.292	Colobus_angolensis_palliatus
ENSOANG00000001556	TRUB1	87	69.697	ENSCGRG00001010322	-	74	69.708	Cricetulus_griseus_chok1gshd
ENSOANG00000001556	TRUB1	79	76.050	ENSCGRG00001016772	-	80	75.833	Cricetulus_griseus_chok1gshd
ENSOANG00000001556	TRUB1	87	77.273	ENSCGRG00000010806	Trub1	84	77.372	Cricetulus_griseus_crigri
ENSOANG00000001556	TRUB1	81	63.821	ENSCSEG00000011261	trub1	89	59.643	Cynoglossus_semilaevis
ENSOANG00000001556	TRUB1	86	65.385	ENSCVAG00000008791	trub1	78	66.142	Cyprinodon_variegatus
ENSOANG00000001556	TRUB1	83	65.882	ENSDARG00000053805	trub1	85	65.992	Danio_rerio
ENSOANG00000001556	TRUB1	93	76.325	ENSDNOG00000001069	TRUB1	78	78.467	Dasypus_novemcinctus
ENSOANG00000001556	TRUB1	87	79.545	ENSDORG00000010431	Trub1	79	79.562	Dipodomys_ordii
ENSOANG00000001556	TRUB1	68	76.812	ENSETEG00000009183	TRUB1	58	76.812	Echinops_telfairi
ENSOANG00000001556	TRUB1	93	78.445	ENSEASG00005014739	TRUB1	78	80.657	Equus_asinus_asinus
ENSOANG00000001556	TRUB1	93	78.445	ENSECAG00000007177	TRUB1	78	80.657	Equus_caballus
ENSOANG00000001556	TRUB1	92	71.223	ENSEEUG00000013993	TRUB1	76	71.898	Erinaceus_europaeus
ENSOANG00000001556	TRUB1	82	68.952	ENSELUG00000000502	trub1	87	68.952	Esox_lucius
ENSOANG00000001556	TRUB1	93	78.799	ENSFCAG00000031927	TRUB1	79	81.022	Felis_catus
ENSOANG00000001556	TRUB1	80	77.366	ENSFALG00000002232	TRUB1	93	77.366	Ficedula_albicollis
ENSOANG00000001556	TRUB1	61	80.645	ENSFDAG00000008140	TRUB1	76	80.645	Fukomys_damarensis
ENSOANG00000001556	TRUB1	86	63.602	ENSFHEG00000004016	trub1	86	65.600	Fundulus_heteroclitus
ENSOANG00000001556	TRUB1	91	75.636	ENSGALG00000009091	TRUB1	97	75.636	Gallus_gallus
ENSOANG00000001556	TRUB1	87	63.019	ENSGAFG00000009193	trub1	87	65.587	Gambusia_affinis
ENSOANG00000001556	TRUB1	63	68.750	ENSGACG00000015387	trub1	94	68.750	Gasterosteus_aculeatus
ENSOANG00000001556	TRUB1	97	75.085	ENSGAGG00000009758	TRUB1	79	77.978	Gopherus_agassizii
ENSOANG00000001556	TRUB1	93	78.092	ENSGGOG00000004583	TRUB1	78	80.292	Gorilla_gorilla
ENSOANG00000001556	TRUB1	88	64.794	ENSHBUG00000016787	trub1	92	66.406	Haplochromis_burtoni
ENSOANG00000001556	TRUB1	94	75.789	ENSHGLG00000015314	TRUB1	79	77.899	Heterocephalus_glaber_female
ENSOANG00000001556	TRUB1	61	80.645	ENSHGLG00100009183	TRUB1	78	80.645	Heterocephalus_glaber_male
ENSOANG00000001556	TRUB1	84	65.234	ENSHCOG00000017877	trub1	89	66.397	Hippocampus_comes
ENSOANG00000001556	TRUB1	83	66.270	ENSIPUG00000017559	trub1	86	67.901	Ictalurus_punctatus
ENSOANG00000001556	TRUB1	90	78.832	ENSSTOG00000003641	TRUB1	82	78.832	Ictidomys_tridecemlineatus
ENSOANG00000001556	TRUB1	93	78.292	ENSJJAG00000011800	Trub1	80	79.487	Jaculus_jaculus
ENSOANG00000001556	TRUB1	85	65.504	ENSKMAG00000006232	trub1	89	67.611	Kryptolebias_marmoratus
ENSOANG00000001556	TRUB1	84	66.535	ENSLBEG00000026722	trub1	86	68.016	Labrus_bergylta
ENSOANG00000001556	TRUB1	98	69.024	ENSLACG00000014885	TRUB1	94	70.775	Latimeria_chalumnae
ENSOANG00000001556	TRUB1	97	65.529	ENSLOCG00000012979	trub1	93	68.864	Lepisosteus_oculatus
ENSOANG00000001556	TRUB1	85	79.537	ENSLAFG00000015452	TRUB1	81	76.596	Loxodonta_africana
ENSOANG00000001556	TRUB1	93	78.092	ENSMFAG00000031767	TRUB1	78	80.292	Macaca_fascicularis
ENSOANG00000001556	TRUB1	93	78.092	ENSMMUG00000001902	TRUB1	78	80.292	Macaca_mulatta
ENSOANG00000001556	TRUB1	93	73.498	ENSMNEG00000044646	TRUB1	78	75.547	Macaca_nemestrina
ENSOANG00000001556	TRUB1	93	78.092	ENSMLEG00000042655	TRUB1	78	80.292	Mandrillus_leucophaeus
ENSOANG00000001556	TRUB1	85	66.279	ENSMZEG00005024095	trub1	92	66.406	Maylandia_zebra
ENSOANG00000001556	TRUB1	90	76.190	ENSMGAG00000011135	TRUB1	94	76.190	Meleagris_gallopavo
ENSOANG00000001556	TRUB1	87	74.621	ENSMAUG00000011101	Trub1	81	74.818	Mesocricetus_auratus
ENSOANG00000001556	TRUB1	93	78.445	ENSMICG00000016324	TRUB1	79	80.657	Microcebus_murinus
ENSOANG00000001556	TRUB1	87	76.136	ENSMOCG00000017759	Trub1	83	76.277	Microtus_ochrogaster
ENSOANG00000001556	TRUB1	92	84.588	ENSMODG00000009676	TRUB1	78	84.155	Monodelphis_domestica
ENSOANG00000001556	TRUB1	88	77.154	MGP_CAROLIEiJ_G0023100	Trub1	81	76.923	Mus_caroli
ENSOANG00000001556	TRUB1	88	77.154	ENSMUSG00000025086	Trub1	81	76.923	Mus_musculus
ENSOANG00000001556	TRUB1	93	75.801	MGP_PahariEiJ_G0014588	Trub1	81	76.923	Mus_pahari
ENSOANG00000001556	TRUB1	88	76.404	MGP_SPRETEiJ_G0024021	Trub1	81	76.190	Mus_spretus
ENSOANG00000001556	TRUB1	93	79.152	ENSMPUG00000003556	TRUB1	78	81.387	Mustela_putorius_furo
ENSOANG00000001556	TRUB1	93	79.859	ENSMLUG00000017686	TRUB1	81	81.387	Myotis_lucifugus
ENSOANG00000001556	TRUB1	93	77.739	ENSNGAG00000018682	Trub1	79	79.927	Nannospalax_galili
ENSOANG00000001556	TRUB1	82	68.421	ENSNBRG00000023393	trub1	88	68.421	Neolamprologus_brichardi
ENSOANG00000001556	TRUB1	93	78.092	ENSNLEG00000016345	TRUB1	78	80.292	Nomascus_leucogenys
ENSOANG00000001556	TRUB1	66	89.552	ENSMEUG00000006603	TRUB1	76	88.835	Notamacropus_eugenii
ENSOANG00000001556	TRUB1	90	77.007	ENSOPRG00000009371	TRUB1	80	77.007	Ochotona_princeps
ENSOANG00000001556	TRUB1	91	77.455	ENSODEG00000010854	TRUB1	79	77.455	Octodon_degus
ENSOANG00000001556	TRUB1	82	67.068	ENSONIG00000007249	trub1	90	67.206	Oreochromis_niloticus
ENSOANG00000001556	TRUB1	93	76.241	ENSOCUG00000009456	TRUB1	79	78.388	Oryctolagus_cuniculus
ENSOANG00000001556	TRUB1	80	69.295	ENSORLG00000029719	trub1	86	69.295	Oryzias_latipes
ENSOANG00000001556	TRUB1	80	68.880	ENSORLG00020016767	trub1	85	68.880	Oryzias_latipes_hni
ENSOANG00000001556	TRUB1	80	68.880	ENSORLG00015014728	trub1	86	68.880	Oryzias_latipes_hsok
ENSOANG00000001556	TRUB1	87	63.704	ENSOMEG00000014556	trub1	90	64.844	Oryzias_melastigma
ENSOANG00000001556	TRUB1	93	78.092	ENSOGAG00000015895	TRUB1	78	80.292	Otolemur_garnettii
ENSOANG00000001556	TRUB1	90	77.936	ENSOARG00000015591	TRUB1	80	77.936	Ovis_aries
ENSOANG00000001556	TRUB1	93	78.092	ENSPPAG00000043645	TRUB1	78	80.292	Pan_paniscus
ENSOANG00000001556	TRUB1	93	78.092	ENSPPRG00000007096	TRUB1	79	80.292	Panthera_pardus
ENSOANG00000001556	TRUB1	93	78.445	ENSPTIG00000006378	TRUB1	79	80.657	Panthera_tigris_altaica
ENSOANG00000001556	TRUB1	93	78.092	ENSPTRG00000002964	TRUB1	78	80.292	Pan_troglodytes
ENSOANG00000001556	TRUB1	93	78.092	ENSPANG00000020712	TRUB1	78	80.292	Papio_anubis
ENSOANG00000001556	TRUB1	67	58.685	ENSPKIG00000003852	trub1	91	58.685	Paramormyrops_kingsleyae
ENSOANG00000001556	TRUB1	92	76.950	ENSPSIG00000012877	TRUB1	95	77.536	Pelodiscus_sinensis
ENSOANG00000001556	TRUB1	83	64.427	ENSPMGG00000000075	trub1	89	64.777	Periophthalmus_magnuspinnatus
ENSOANG00000001556	TRUB1	90	75.547	ENSPEMG00000011156	Trub1	81	75.547	Peromyscus_maniculatus_bairdii
ENSOANG00000001556	TRUB1	90	85.662	ENSPCIG00000009729	TRUB1	75	85.199	Phascolarctos_cinereus
ENSOANG00000001556	TRUB1	83	66.135	ENSPFOG00000009950	trub1	91	66.532	Poecilia_formosa
ENSOANG00000001556	TRUB1	87	64.015	ENSPLAG00000013855	trub1	87	66.129	Poecilia_latipinna
ENSOANG00000001556	TRUB1	87	64.394	ENSPMEG00000009064	trub1	90	66.532	Poecilia_mexicana
ENSOANG00000001556	TRUB1	85	66.537	ENSPREG00000003343	trub1	90	67.742	Poecilia_reticulata
ENSOANG00000001556	TRUB1	93	77.739	ENSPPYG00000002676	TRUB1	78	79.927	Pongo_abelii
ENSOANG00000001556	TRUB1	93	69.258	ENSPCAG00000008427	TRUB1	78	70.909	Procavia_capensis
ENSOANG00000001556	TRUB1	93	73.145	ENSPCOG00000024360	TRUB1	77	75.182	Propithecus_coquereli
ENSOANG00000001556	TRUB1	69	81.340	ENSPVAG00000007575	TRUB1	78	82.439	Pteropus_vampyrus
ENSOANG00000001556	TRUB1	85	66.279	ENSPNYG00000018614	trub1	92	66.406	Pundamilia_nyererei
ENSOANG00000001556	TRUB1	83	57.540	ENSPNAG00000006881	trub1	78	59.091	Pygocentrus_nattereri
ENSOANG00000001556	TRUB1	93	74.468	ENSRNOG00000017321	Trub1	80	76.190	Rattus_norvegicus
ENSOANG00000001556	TRUB1	93	68.198	ENSRBIG00000033423	TRUB1	77	70.073	Rhinopithecus_bieti
ENSOANG00000001556	TRUB1	93	78.092	ENSRROG00000033902	TRUB1	78	80.292	Rhinopithecus_roxellana
ENSOANG00000001556	TRUB1	89	38.220	YNL292W	-	75	38.220	Saccharomyces_cerevisiae
ENSOANG00000001556	TRUB1	96	76.289	ENSSBOG00000024237	TRUB1	78	80.292	Saimiri_boliviensis_boliviensis
ENSOANG00000001556	TRUB1	79	83.884	ENSSHAG00000009346	TRUB1	81	83.884	Sarcophilus_harrisii
ENSOANG00000001556	TRUB1	93	65.125	ENSSFOG00015022124	trub1	87	68.846	Scleropages_formosus
ENSOANG00000001556	TRUB1	85	65.769	ENSSMAG00000001020	trub1	88	68.016	Scophthalmus_maximus
ENSOANG00000001556	TRUB1	78	67.932	ENSSDUG00000016414	trub1	89	67.206	Seriola_dumerili
ENSOANG00000001556	TRUB1	78	68.354	ENSSLDG00000015486	trub1	89	67.611	Seriola_lalandi_dorsalis
ENSOANG00000001556	TRUB1	92	78.853	ENSSPUG00000001642	TRUB1	95	79.061	Sphenodon_punctatus
ENSOANG00000001556	TRUB1	82	69.636	ENSSPAG00000001217	trub1	89	69.636	Stegastes_partitus
ENSOANG00000001556	TRUB1	90	79.779	ENSSSCG00000010653	TRUB1	79	79.630	Sus_scrofa
ENSOANG00000001556	TRUB1	89	77.778	ENSTGUG00000010971	TRUB1	97	77.656	Taeniopygia_guttata
ENSOANG00000001556	TRUB1	78	65.401	ENSTBEG00000002880	TRUB1	93	65.401	Tupaia_belangeri
ENSOANG00000001556	TRUB1	68	82.439	ENSTTRG00000005767	TRUB1	78	82.439	Tursiops_truncatus
ENSOANG00000001556	TRUB1	93	78.799	ENSUAMG00000024876	TRUB1	78	81.022	Ursus_americanus
ENSOANG00000001556	TRUB1	90	81.022	ENSUMAG00000002411	TRUB1	81	81.022	Ursus_maritimus
ENSOANG00000001556	TRUB1	90	81.387	ENSVPAG00000005507	TRUB1	79	81.387	Vicugna_pacos
ENSOANG00000001556	TRUB1	90	81.022	ENSVVUG00000010085	TRUB1	66	81.022	Vulpes_vulpes
ENSOANG00000001556	TRUB1	90	66.788	ENSXETG00000023828	trub1	99	66.788	Xenopus_tropicalis
ENSOANG00000001556	TRUB1	85	64.591	ENSXCOG00000017847	trub1	88	64.919	Xiphophorus_couchianus
ENSOANG00000001556	TRUB1	87	63.636	ENSXMAG00000014701	trub1	90	65.726	Xiphophorus_maculatus