EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOANG00000001598 (Gene tree)
Gene ID: -
Gene Symbol: SMNDC1
Alias: -
Full Name: survival motor neuron domain containing 1
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Minus strand
Length: 10698 bases
Position: chrUltra272:3766825-3777522
Accession: 16900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000002552	SMN	PF06003.12	1.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000002553	SMNDC1-201	1891	XM_001512758	ENSOANP00000002552	238 (aa)	XP_001512808	F7F0X9

Gene Model

Click here to download ENSOANG00000001598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000001598's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000001598	SMNDC1	100	98.319	ENSG00000119953	SMNDC1	100	98.319	Homo_sapiens
ENSOANG00000001598	SMNDC1	100	75.630	ENSAPOG00000021772	smndc1	100	75.630	Acanthochromis_polyacanthus
ENSOANG00000001598	SMNDC1	100	97.899	ENSAMEG00000005251	SMNDC1	100	97.899	Ailuropoda_melanoleuca
ENSOANG00000001598	SMNDC1	100	76.471	ENSACIG00000004819	smndc1	100	76.471	Amphilophus_citrinellus
ENSOANG00000001598	SMNDC1	100	75.630	ENSAOCG00000017869	smndc1	100	75.630	Amphiprion_ocellaris
ENSOANG00000001598	SMNDC1	100	75.630	ENSAPEG00000007752	smndc1	100	75.630	Amphiprion_percula
ENSOANG00000001598	SMNDC1	100	76.891	ENSATEG00000006830	smndc1	100	76.891	Anabas_testudineus
ENSOANG00000001598	SMNDC1	83	96.970	ENSAPLG00000004322	SMNDC1	100	96.970	Anas_platyrhynchos
ENSOANG00000001598	SMNDC1	100	96.639	ENSACAG00000005983	SMNDC1	100	96.639	Anolis_carolinensis
ENSOANG00000001598	SMNDC1	100	97.899	ENSANAG00000032875	SMNDC1	100	97.899	Aotus_nancymaae
ENSOANG00000001598	SMNDC1	100	76.471	ENSACLG00000016360	smndc1	100	76.471	Astatotilapia_calliptera
ENSOANG00000001598	SMNDC1	100	76.471	ENSAMXG00000020310	smndc1	100	76.471	Astyanax_mexicanus
ENSOANG00000001598	SMNDC1	100	97.479	ENSBTAG00000000551	SMNDC1	100	97.479	Bos_taurus
ENSOANG00000001598	SMNDC1	100	97.899	ENSCJAG00000018624	SMNDC1	100	97.899	Callithrix_jacchus
ENSOANG00000001598	SMNDC1	100	97.899	ENSCAFG00000010720	SMNDC1	100	97.899	Canis_familiaris
ENSOANG00000001598	SMNDC1	100	97.899	ENSCAFG00020011913	SMNDC1	100	97.899	Canis_lupus_dingo
ENSOANG00000001598	SMNDC1	100	97.479	ENSCHIG00000010604	SMNDC1	100	97.479	Capra_hircus
ENSOANG00000001598	SMNDC1	100	98.319	ENSTSYG00000026454	SMNDC1	100	98.319	Carlito_syrichta
ENSOANG00000001598	SMNDC1	84	97.512	ENSCAPG00000009132	SMNDC1	100	97.512	Cavia_aperea
ENSOANG00000001598	SMNDC1	100	97.899	ENSCPOG00000031666	SMNDC1	100	97.899	Cavia_porcellus
ENSOANG00000001598	SMNDC1	100	97.899	ENSCCAG00000021793	SMNDC1	100	97.899	Cebus_capucinus
ENSOANG00000001598	SMNDC1	100	97.479	ENSCATG00000035910	SMNDC1	100	97.479	Cercocebus_atys
ENSOANG00000001598	SMNDC1	100	97.899	ENSCLAG00000002838	SMNDC1	100	97.899	Chinchilla_lanigera
ENSOANG00000001598	SMNDC1	100	97.899	ENSCSAG00000005169	SMNDC1	100	97.899	Chlorocebus_sabaeus
ENSOANG00000001598	SMNDC1	81	96.891	ENSCHOG00000002936	SMNDC1	100	96.891	Choloepus_hoffmanni
ENSOANG00000001598	SMNDC1	100	98.319	ENSCPBG00000012837	SMNDC1	100	98.319	Chrysemys_picta_bellii
ENSOANG00000001598	SMNDC1	100	90.336	ENSCANG00000034620	-	100	90.336	Colobus_angolensis_palliatus
ENSOANG00000001598	SMNDC1	100	97.899	ENSCANG00000031720	-	100	97.899	Colobus_angolensis_palliatus
ENSOANG00000001598	SMNDC1	100	76.891	ENSCANG00000036994	-	100	76.891	Colobus_angolensis_palliatus
ENSOANG00000001598	SMNDC1	100	97.899	ENSCGRG00001012973	Smndc1	100	97.899	Cricetulus_griseus_chok1gshd
ENSOANG00000001598	SMNDC1	100	97.899	ENSCGRG00000012396	Smndc1	100	97.899	Cricetulus_griseus_crigri
ENSOANG00000001598	SMNDC1	100	76.050	ENSCSEG00000015621	smndc1	100	76.050	Cynoglossus_semilaevis
ENSOANG00000001598	SMNDC1	100	77.311	ENSCVAG00000020432	smndc1	100	77.311	Cyprinodon_variegatus
ENSOANG00000001598	SMNDC1	100	80.252	ENSDARG00000056235	smndc1	100	80.252	Danio_rerio
ENSOANG00000001598	SMNDC1	100	97.899	ENSDNOG00000016387	SMNDC1	83	97.899	Dasypus_novemcinctus
ENSOANG00000001598	SMNDC1	100	97.899	ENSDORG00000023715	Smndc1	100	97.899	Dipodomys_ordii
ENSOANG00000001598	SMNDC1	95	41.107	FBgn0039977	CG17454	98	43.373	Drosophila_melanogaster
ENSOANG00000001598	SMNDC1	100	71.784	ENSEBUG00000010929	smndc1	100	71.784	Eptatretus_burgeri
ENSOANG00000001598	SMNDC1	100	97.899	ENSEASG00005014930	SMNDC1	100	97.899	Equus_asinus_asinus
ENSOANG00000001598	SMNDC1	100	97.899	ENSECAG00000029973	SMNDC1	100	97.899	Equus_caballus
ENSOANG00000001598	SMNDC1	83	68.182	ENSEEUG00000013407	-	100	68.182	Erinaceus_europaeus
ENSOANG00000001598	SMNDC1	100	78.571	ENSELUG00000000227	smndc1	100	78.571	Esox_lucius
ENSOANG00000001598	SMNDC1	100	97.899	ENSFCAG00000027353	SMNDC1	100	97.899	Felis_catus
ENSOANG00000001598	SMNDC1	100	96.639	ENSFALG00000002306	SMNDC1	100	96.639	Ficedula_albicollis
ENSOANG00000001598	SMNDC1	100	98.319	ENSFDAG00000006468	SMNDC1	100	98.319	Fukomys_damarensis
ENSOANG00000001598	SMNDC1	100	76.891	ENSFHEG00000020150	smndc1	100	76.891	Fundulus_heteroclitus
ENSOANG00000001598	SMNDC1	100	77.731	ENSGMOG00000016585	smndc1	100	77.731	Gadus_morhua
ENSOANG00000001598	SMNDC1	100	96.639	ENSGALG00000008561	SMNDC1	100	96.639	Gallus_gallus
ENSOANG00000001598	SMNDC1	100	75.630	ENSGAFG00000011582	smndc1	100	75.630	Gambusia_affinis
ENSOANG00000001598	SMNDC1	100	76.471	ENSGACG00000009468	smndc1	100	76.471	Gasterosteus_aculeatus
ENSOANG00000001598	SMNDC1	100	98.319	ENSGAGG00000024547	SMNDC1	100	98.319	Gopherus_agassizii
ENSOANG00000001598	SMNDC1	100	97.899	ENSGGOG00000010071	SMNDC1	100	97.899	Gorilla_gorilla
ENSOANG00000001598	SMNDC1	100	76.471	ENSHBUG00000017596	smndc1	100	76.471	Haplochromis_burtoni
ENSOANG00000001598	SMNDC1	100	98.319	ENSHGLG00000013390	-	100	98.319	Heterocephalus_glaber_female
ENSOANG00000001598	SMNDC1	100	67.213	ENSHGLG00000001157	-	100	64.082	Heterocephalus_glaber_female
ENSOANG00000001598	SMNDC1	100	75.410	ENSHGLG00100004278	-	100	75.000	Heterocephalus_glaber_male
ENSOANG00000001598	SMNDC1	100	98.319	ENSHGLG00100004814	-	100	98.319	Heterocephalus_glaber_male
ENSOANG00000001598	SMNDC1	100	74.895	ENSHCOG00000000783	smndc1	100	74.895	Hippocampus_comes
ENSOANG00000001598	SMNDC1	100	78.151	ENSIPUG00000004217	smndc1	100	78.151	Ictalurus_punctatus
ENSOANG00000001598	SMNDC1	100	98.319	ENSSTOG00000006088	SMNDC1	100	98.319	Ictidomys_tridecemlineatus
ENSOANG00000001598	SMNDC1	100	98.319	ENSJJAG00000019974	Smndc1	100	98.319	Jaculus_jaculus
ENSOANG00000001598	SMNDC1	100	75.630	ENSKMAG00000020134	smndc1	100	75.630	Kryptolebias_marmoratus
ENSOANG00000001598	SMNDC1	100	74.790	ENSLBEG00000004598	smndc1	100	74.790	Labrus_bergylta
ENSOANG00000001598	SMNDC1	100	84.454	ENSLACG00000007784	SMNDC1	100	84.454	Latimeria_chalumnae
ENSOANG00000001598	SMNDC1	100	85.714	ENSLOCG00000012355	smndc1	100	85.714	Lepisosteus_oculatus
ENSOANG00000001598	SMNDC1	100	97.479	ENSLAFG00000014353	SMNDC1	100	97.479	Loxodonta_africana
ENSOANG00000001598	SMNDC1	100	80.252	ENSMFAG00000038381	-	100	80.252	Macaca_fascicularis
ENSOANG00000001598	SMNDC1	100	97.899	ENSMFAG00000002433	-	100	97.899	Macaca_fascicularis
ENSOANG00000001598	SMNDC1	100	97.899	ENSMMUG00000007775	SMNDC1	100	97.899	Macaca_mulatta
ENSOANG00000001598	SMNDC1	100	80.252	ENSMMUG00000045875	-	100	80.252	Macaca_mulatta
ENSOANG00000001598	SMNDC1	100	97.899	ENSMNEG00000042963	-	100	97.899	Macaca_nemestrina
ENSOANG00000001598	SMNDC1	100	86.555	ENSMNEG00000033853	-	100	86.555	Macaca_nemestrina
ENSOANG00000001598	SMNDC1	100	91.632	ENSMLEG00000040236	SMNDC1	100	91.213	Mandrillus_leucophaeus
ENSOANG00000001598	SMNDC1	89	74.178	ENSMAMG00000018233	smndc1	87	74.178	Mastacembelus_armatus
ENSOANG00000001598	SMNDC1	100	76.471	ENSMZEG00005027510	smndc1	100	76.471	Maylandia_zebra
ENSOANG00000001598	SMNDC1	84	96.500	ENSMGAG00000010777	SMNDC1	84	96.500	Meleagris_gallopavo
ENSOANG00000001598	SMNDC1	99	78.903	ENSMAUG00000005459	-	93	78.903	Mesocricetus_auratus
ENSOANG00000001598	SMNDC1	100	97.899	ENSMAUG00000012243	-	100	97.899	Mesocricetus_auratus
ENSOANG00000001598	SMNDC1	100	97.899	ENSMICG00000027336	-	100	97.899	Microcebus_murinus
ENSOANG00000001598	SMNDC1	100	85.714	ENSMICG00000031640	-	100	85.714	Microcebus_murinus
ENSOANG00000001598	SMNDC1	100	97.479	ENSMOCG00000002458	Smndc1	100	97.479	Microtus_ochrogaster
ENSOANG00000001598	SMNDC1	100	76.891	ENSMMOG00000008856	smndc1	100	76.891	Mola_mola
ENSOANG00000001598	SMNDC1	100	98.739	ENSMODG00000010542	SMNDC1	100	98.739	Monodelphis_domestica
ENSOANG00000001598	SMNDC1	100	76.891	ENSMALG00000017598	smndc1	100	76.891	Monopterus_albus
ENSOANG00000001598	SMNDC1	100	98.319	MGP_CAROLIEiJ_G0023072	Smndc1	100	98.319	Mus_caroli
ENSOANG00000001598	SMNDC1	100	97.899	ENSMUSG00000025024	Smndc1	100	97.899	Mus_musculus
ENSOANG00000001598	SMNDC1	100	98.319	MGP_PahariEiJ_G0014560	Smndc1	100	98.319	Mus_pahari
ENSOANG00000001598	SMNDC1	100	97.899	MGP_SPRETEiJ_G0023993	Smndc1	100	97.899	Mus_spretus
ENSOANG00000001598	SMNDC1	100	97.899	ENSMPUG00000002089	SMNDC1	100	97.899	Mustela_putorius_furo
ENSOANG00000001598	SMNDC1	100	97.479	ENSMLUG00000016007	SMNDC1	100	97.479	Myotis_lucifugus
ENSOANG00000001598	SMNDC1	100	97.479	ENSNGAG00000006833	Smndc1	100	97.479	Nannospalax_galili
ENSOANG00000001598	SMNDC1	100	76.050	ENSNBRG00000017089	smndc1	100	76.050	Neolamprologus_brichardi
ENSOANG00000001598	SMNDC1	100	97.899	ENSNLEG00000015471	SMNDC1	100	97.899	Nomascus_leucogenys
ENSOANG00000001598	SMNDC1	82	58.500	ENSMEUG00000010120	-	99	59.000	Notamacropus_eugenii
ENSOANG00000001598	SMNDC1	100	97.899	ENSOPRG00000015348	SMNDC1	100	97.899	Ochotona_princeps
ENSOANG00000001598	SMNDC1	100	68.487	ENSODEG00000007594	-	100	65.546	Octodon_degus
ENSOANG00000001598	SMNDC1	100	76.050	ENSONIG00000000434	smndc1	100	76.050	Oreochromis_niloticus
ENSOANG00000001598	SMNDC1	100	97.899	ENSOCUG00000008145	-	100	97.899	Oryctolagus_cuniculus
ENSOANG00000001598	SMNDC1	100	74.370	ENSOCUG00000012274	-	100	76.050	Oryctolagus_cuniculus
ENSOANG00000001598	SMNDC1	100	76.050	ENSORLG00000005934	smndc1	95	76.050	Oryzias_latipes
ENSOANG00000001598	SMNDC1	100	76.050	ENSORLG00020008796	smndc1	95	76.050	Oryzias_latipes_hni
ENSOANG00000001598	SMNDC1	100	76.050	ENSORLG00015013666	smndc1	100	76.050	Oryzias_latipes_hsok
ENSOANG00000001598	SMNDC1	100	78.151	ENSOMEG00000007590	smndc1	100	78.151	Oryzias_melastigma
ENSOANG00000001598	SMNDC1	100	97.479	ENSOGAG00000000571	SMNDC1	100	97.479	Otolemur_garnettii
ENSOANG00000001598	SMNDC1	100	97.479	ENSOARG00000009500	SMNDC1	100	97.479	Ovis_aries
ENSOANG00000001598	SMNDC1	100	97.899	ENSPPAG00000027815	SMNDC1	100	97.899	Pan_paniscus
ENSOANG00000001598	SMNDC1	100	97.899	ENSPPRG00000013749	SMNDC1	100	97.899	Panthera_pardus
ENSOANG00000001598	SMNDC1	100	97.899	ENSPTIG00000011451	SMNDC1	100	97.899	Panthera_tigris_altaica
ENSOANG00000001598	SMNDC1	100	97.899	ENSPTRG00000002937	SMNDC1	100	97.899	Pan_troglodytes
ENSOANG00000001598	SMNDC1	100	97.899	ENSPANG00000020805	-	100	97.899	Papio_anubis
ENSOANG00000001598	SMNDC1	100	92.017	ENSPANG00000031346	-	100	92.017	Papio_anubis
ENSOANG00000001598	SMNDC1	100	81.513	ENSPKIG00000017164	smndc1	100	81.513	Paramormyrops_kingsleyae
ENSOANG00000001598	SMNDC1	100	98.739	ENSPSIG00000012257	SMNDC1	100	98.739	Pelodiscus_sinensis
ENSOANG00000001598	SMNDC1	100	73.859	ENSPMGG00000015651	smndc1	100	73.859	Periophthalmus_magnuspinnatus
ENSOANG00000001598	SMNDC1	100	97.899	ENSPEMG00000022058	Smndc1	100	97.899	Peromyscus_maniculatus_bairdii
ENSOANG00000001598	SMNDC1	100	68.033	ENSPMAG00000007705	smndc1	100	68.033	Petromyzon_marinus
ENSOANG00000001598	SMNDC1	97	62.609	ENSPCIG00000009693	-	100	62.609	Phascolarctos_cinereus
ENSOANG00000001598	SMNDC1	100	98.739	ENSPCIG00000018419	SMNDC1	100	98.739	Phascolarctos_cinereus
ENSOANG00000001598	SMNDC1	100	76.050	ENSPFOG00000017113	smndc1	100	76.050	Poecilia_formosa
ENSOANG00000001598	SMNDC1	100	76.471	ENSPLAG00000010372	smndc1	100	76.471	Poecilia_latipinna
ENSOANG00000001598	SMNDC1	100	76.471	ENSPMEG00000012288	smndc1	100	76.471	Poecilia_mexicana
ENSOANG00000001598	SMNDC1	100	75.630	ENSPREG00000012279	smndc1	100	75.630	Poecilia_reticulata
ENSOANG00000001598	SMNDC1	100	97.899	ENSPPYG00000002643	SMNDC1	100	97.899	Pongo_abelii
ENSOANG00000001598	SMNDC1	81	96.891	ENSPCAG00000016183	SMNDC1	100	96.891	Procavia_capensis
ENSOANG00000001598	SMNDC1	100	97.479	ENSPCOG00000024343	SMNDC1	100	97.479	Propithecus_coquereli
ENSOANG00000001598	SMNDC1	100	75.630	ENSPVAG00000004368	SMNDC1	100	75.630	Pteropus_vampyrus
ENSOANG00000001598	SMNDC1	92	70.222	ENSPNYG00000024093	smndc1	86	76.263	Pundamilia_nyererei
ENSOANG00000001598	SMNDC1	100	77.311	ENSPNAG00000025285	smndc1	100	77.311	Pygocentrus_nattereri
ENSOANG00000001598	SMNDC1	100	98.319	ENSRNOG00000014833	Smndc1	100	98.319	Rattus_norvegicus
ENSOANG00000001598	SMNDC1	100	81.513	ENSRBIG00000032452	-	100	81.513	Rhinopithecus_bieti
ENSOANG00000001598	SMNDC1	100	97.479	ENSRBIG00000000224	-	100	97.479	Rhinopithecus_bieti
ENSOANG00000001598	SMNDC1	100	81.933	ENSRROG00000039125	-	100	81.933	Rhinopithecus_roxellana
ENSOANG00000001598	SMNDC1	100	97.899	ENSRROG00000044992	-	100	97.899	Rhinopithecus_roxellana
ENSOANG00000001598	SMNDC1	100	97.899	ENSSBOG00000026789	SMNDC1	100	97.899	Saimiri_boliviensis_boliviensis
ENSOANG00000001598	SMNDC1	100	98.739	ENSSHAG00000015189	SMNDC1	100	98.739	Sarcophilus_harrisii
ENSOANG00000001598	SMNDC1	100	81.513	ENSSFOG00015008311	smndc1	100	81.513	Scleropages_formosus
ENSOANG00000001598	SMNDC1	100	76.050	ENSSMAG00000020118	smndc1	100	76.050	Scophthalmus_maximus
ENSOANG00000001598	SMNDC1	100	77.311	ENSSDUG00000015330	smndc1	100	77.311	Seriola_dumerili
ENSOANG00000001598	SMNDC1	100	77.311	ENSSLDG00000017325	smndc1	100	77.311	Seriola_lalandi_dorsalis
ENSOANG00000001598	SMNDC1	100	97.899	ENSSARG00000006063	SMNDC1	100	97.899	Sorex_araneus
ENSOANG00000001598	SMNDC1	100	97.059	ENSSPUG00000004574	SMNDC1	100	97.059	Sphenodon_punctatus
ENSOANG00000001598	SMNDC1	100	75.210	ENSSPAG00000000338	smndc1	100	75.210	Stegastes_partitus
ENSOANG00000001598	SMNDC1	100	97.479	ENSSSCG00000030507	SMNDC1	100	97.479	Sus_scrofa
ENSOANG00000001598	SMNDC1	100	96.639	ENSTGUG00000010599	SMNDC1	100	96.639	Taeniopygia_guttata
ENSOANG00000001598	SMNDC1	100	74.790	ENSTRUG00000023281	smndc1	100	74.790	Takifugu_rubripes
ENSOANG00000001598	SMNDC1	100	75.630	ENSTNIG00000013331	smndc1	100	75.630	Tetraodon_nigroviridis
ENSOANG00000001598	SMNDC1	100	98.319	ENSTBEG00000014337	SMNDC1	100	98.319	Tupaia_belangeri
ENSOANG00000001598	SMNDC1	100	97.899	ENSUAMG00000008142	SMNDC1	100	97.899	Ursus_americanus
ENSOANG00000001598	SMNDC1	100	97.899	ENSUMAG00000023722	SMNDC1	100	97.899	Ursus_maritimus
ENSOANG00000001598	SMNDC1	83	97.980	ENSVPAG00000003402	SMNDC1	100	97.980	Vicugna_pacos
ENSOANG00000001598	SMNDC1	100	97.899	ENSVVUG00000007820	SMNDC1	100	97.899	Vulpes_vulpes
ENSOANG00000001598	SMNDC1	60	83.803	ENSXETG00000015415	SMNDC1	100	83.803	Xenopus_tropicalis
ENSOANG00000001598	SMNDC1	100	75.630	ENSXCOG00000009159	smndc1	100	75.630	Xiphophorus_couchianus
ENSOANG00000001598	SMNDC1	100	75.210	ENSXMAG00000012755	smndc1	100	75.210	Xiphophorus_maculatus