EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOANG00000002066 (Gene tree)
Gene ID: -
Gene Symbol: LSM10
Alias: -
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Minus strand
Length: 372 bases
Position: chrUltra472:483263-483634
Accession: 17562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000003273	LSM	PF01423.22	4.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000003274	LSM10-201	372	-	ENSOANP00000003273	123 (aa)	XP_007668717	F6ZWR5

Gene Model

Click here to download ENSOANG00000002066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000002066's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOANG00000002066	LSM10	57	30.137	ENSOANG00000005398	LSM2	78	30.137
ENSOANG00000002066	LSM10	58	30.986	ENSOANG00000004638	-	60	30.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000002066	LSM10	100	73.984	ENSG00000181817	LSM10	100	73.984	Homo_sapiens
ENSOANG00000002066	LSM10	100	78.862	ENSAMEG00000019854	LSM10	100	78.862	Ailuropoda_melanoleuca
ENSOANG00000002066	LSM10	97	69.748	ENSACIG00000015420	oscp1a	78	69.748	Amphilophus_citrinellus
ENSOANG00000002066	LSM10	86	68.519	ENSAOCG00000015607	LSM10	84	68.519	Amphiprion_ocellaris
ENSOANG00000002066	LSM10	98	67.769	ENSAOCG00000014654	-	99	67.769	Amphiprion_ocellaris
ENSOANG00000002066	LSM10	98	67.769	ENSAOCG00000015618	LSM10	99	67.769	Amphiprion_ocellaris
ENSOANG00000002066	LSM10	86	68.519	ENSAPEG00000021851	LSM10	84	68.519	Amphiprion_percula
ENSOANG00000002066	LSM10	98	67.769	ENSAPEG00000021845	-	99	67.769	Amphiprion_percula
ENSOANG00000002066	LSM10	94	63.793	ENSATEG00000006310	oscp1a	86	63.793	Anabas_testudineus
ENSOANG00000002066	LSM10	100	73.984	ENSACAG00000001231	LSM10	100	73.984	Anolis_carolinensis
ENSOANG00000002066	LSM10	99	72.951	ENSANAG00000031489	-	100	72.951	Aotus_nancymaae
ENSOANG00000002066	LSM10	100	74.797	ENSANAG00000018759	-	100	74.797	Aotus_nancymaae
ENSOANG00000002066	LSM10	98	68.595	ENSACLG00000004728	oscp1a	98	68.595	Astatotilapia_calliptera
ENSOANG00000002066	LSM10	96	67.797	ENSAMXG00000025301	oscp1a	98	67.797	Astyanax_mexicanus
ENSOANG00000002066	LSM10	99	77.869	ENSBTAG00000024096	LSM10	100	77.869	Bos_taurus
ENSOANG00000002066	LSM10	100	73.984	ENSCJAG00000044880	LSM10	100	73.984	Callithrix_jacchus
ENSOANG00000002066	LSM10	100	78.862	ENSCAFG00000003382	LSM10	100	78.862	Canis_familiaris
ENSOANG00000002066	LSM10	100	78.862	ENSCAFG00020008920	LSM10	100	78.862	Canis_lupus_dingo
ENSOANG00000002066	LSM10	99	77.869	ENSCHIG00000009398	LSM10	100	77.869	Capra_hircus
ENSOANG00000002066	LSM10	100	76.423	ENSCAPG00000012567	LSM10	100	76.423	Cavia_aperea
ENSOANG00000002066	LSM10	100	76.423	ENSCPOG00000039302	LSM10	100	76.423	Cavia_porcellus
ENSOANG00000002066	LSM10	100	74.797	ENSCCAG00000018913	-	100	74.797	Cebus_capucinus
ENSOANG00000002066	LSM10	99	72.951	ENSCCAG00000008378	-	99	72.951	Cebus_capucinus
ENSOANG00000002066	LSM10	100	73.171	ENSCATG00000006589	LSM10	100	73.171	Cercocebus_atys
ENSOANG00000002066	LSM10	100	78.049	ENSCLAG00000008633	LSM10	100	78.049	Chinchilla_lanigera
ENSOANG00000002066	LSM10	100	73.171	ENSCSAG00000000134	LSM10	100	73.171	Chlorocebus_sabaeus
ENSOANG00000002066	LSM10	100	74.400	ENSCHOG00000008615	LSM10	100	74.400	Choloepus_hoffmanni
ENSOANG00000002066	LSM10	78	30.208	ENSCING00000024984	-	83	30.208	Ciona_intestinalis
ENSOANG00000002066	LSM10	80	34.343	ENSCSAVG00000001896	-	85	34.343	Ciona_savignyi
ENSOANG00000002066	LSM10	100	73.171	ENSCANG00000019928	LSM10	100	73.171	Colobus_angolensis_palliatus
ENSOANG00000002066	LSM10	98	77.686	ENSCGRG00001004317	-	99	77.686	Cricetulus_griseus_chok1gshd
ENSOANG00000002066	LSM10	93	69.231	ENSCGRG00001022673	-	94	69.231	Cricetulus_griseus_chok1gshd
ENSOANG00000002066	LSM10	98	77.686	ENSCGRG00000014935	-	99	77.686	Cricetulus_griseus_crigri
ENSOANG00000002066	LSM10	93	69.231	ENSCGRG00000015514	-	94	69.231	Cricetulus_griseus_crigri
ENSOANG00000002066	LSM10	98	66.942	ENSCSEG00000010374	oscp1a	81	66.942	Cynoglossus_semilaevis
ENSOANG00000002066	LSM10	96	63.559	ENSCVAG00000001536	oscp1a	89	63.559	Cyprinodon_variegatus
ENSOANG00000002066	LSM10	98	71.074	ENSDARG00000101222	oscp1a	100	71.074	Danio_rerio
ENSOANG00000002066	LSM10	69	72.941	ENSDARG00000109563	CABZ01074453.1	99	72.941	Danio_rerio
ENSOANG00000002066	LSM10	98	77.686	ENSDNOG00000036662	LSM10	98	77.686	Dasypus_novemcinctus
ENSOANG00000002066	LSM10	100	75.610	ENSDORG00000007579	Lsm10	100	75.610	Dipodomys_ordii
ENSOANG00000002066	LSM10	100	75.610	ENSETEG00000005703	LSM10	100	75.610	Echinops_telfairi
ENSOANG00000002066	LSM10	91	54.464	ENSEBUG00000001312	oscp1a	92	54.464	Eptatretus_burgeri
ENSOANG00000002066	LSM10	100	78.049	ENSEASG00005012194	LSM10	100	78.049	Equus_asinus_asinus
ENSOANG00000002066	LSM10	100	78.049	ENSECAG00000005071	LSM10	100	78.049	Equus_caballus
ENSOANG00000002066	LSM10	100	77.236	ENSEEUG00000012032	LSM10	100	77.236	Erinaceus_europaeus
ENSOANG00000002066	LSM10	99	69.672	ENSELUG00000007452	oscp1a	100	69.672	Esox_lucius
ENSOANG00000002066	LSM10	100	73.171	ENSFALG00000000851	LSM10	100	73.171	Ficedula_albicollis
ENSOANG00000002066	LSM10	100	77.236	ENSFDAG00000021056	LSM10	100	77.236	Fukomys_damarensis
ENSOANG00000002066	LSM10	89	68.182	ENSFHEG00000001058	oscp1a	95	68.182	Fundulus_heteroclitus
ENSOANG00000002066	LSM10	98	60.833	ENSGMOG00000019832	oscp1a	99	60.833	Gadus_morhua
ENSOANG00000002066	LSM10	100	77.236	ENSGALG00000002127	LSM10	100	77.236	Gallus_gallus
ENSOANG00000002066	LSM10	95	59.167	ENSGAFG00000016445	oscp1a	96	59.167	Gambusia_affinis
ENSOANG00000002066	LSM10	97	64.706	ENSGACG00000002329	oscp1a	98	64.706	Gasterosteus_aculeatus
ENSOANG00000002066	LSM10	100	73.171	ENSGAGG00000024848	LSM10	100	73.171	Gopherus_agassizii
ENSOANG00000002066	LSM10	100	73.984	ENSGGOG00000003556	LSM10	100	73.984	Gorilla_gorilla
ENSOANG00000002066	LSM10	98	68.595	ENSHBUG00000001722	oscp1a	98	68.595	Haplochromis_burtoni
ENSOANG00000002066	LSM10	100	76.423	ENSHGLG00000011625	LSM10	100	76.423	Heterocephalus_glaber_female
ENSOANG00000002066	LSM10	100	76.423	ENSHGLG00100001769	LSM10	100	76.423	Heterocephalus_glaber_male
ENSOANG00000002066	LSM10	86	66.038	ENSIPUG00000005808	oscp1a	92	66.038	Ictalurus_punctatus
ENSOANG00000002066	LSM10	100	78.049	ENSSTOG00000000606	LSM10	100	78.049	Ictidomys_tridecemlineatus
ENSOANG00000002066	LSM10	98	66.942	ENSKMAG00000012143	oscp1a	99	66.942	Kryptolebias_marmoratus
ENSOANG00000002066	LSM10	98	65.000	ENSLBEG00000017764	oscp1a	98	65.000	Labrus_bergylta
ENSOANG00000002066	LSM10	100	66.667	ENSLACG00000015904	LSM10	95	66.667	Latimeria_chalumnae
ENSOANG00000002066	LSM10	98	66.667	ENSLOCG00000018277	oscp1a	98	66.667	Lepisosteus_oculatus
ENSOANG00000002066	LSM10	100	75.610	ENSLAFG00000009600	LSM10	100	75.610	Loxodonta_africana
ENSOANG00000002066	LSM10	100	73.171	ENSMFAG00000009115	LSM10	100	73.171	Macaca_fascicularis
ENSOANG00000002066	LSM10	100	73.171	ENSMMUG00000017338	LSM10	100	73.171	Macaca_mulatta
ENSOANG00000002066	LSM10	100	73.171	ENSMNEG00000020023	LSM10	100	73.171	Macaca_nemestrina
ENSOANG00000002066	LSM10	100	73.171	ENSMLEG00000025150	LSM10	100	73.171	Mandrillus_leucophaeus
ENSOANG00000002066	LSM10	100	66.667	ENSMAMG00000004427	oscp1a	100	66.667	Mastacembelus_armatus
ENSOANG00000002066	LSM10	98	68.595	ENSMZEG00005026307	oscp1a	98	68.595	Maylandia_zebra
ENSOANG00000002066	LSM10	100	78.862	ENSMGAG00000015707	LSM10	100	78.862	Meleagris_gallopavo
ENSOANG00000002066	LSM10	98	76.860	ENSMAUG00000016624	Lsm10	99	76.860	Mesocricetus_auratus
ENSOANG00000002066	LSM10	98	76.033	ENSMOCG00000021943	Lsm10	99	76.033	Microtus_ochrogaster
ENSOANG00000002066	LSM10	93	68.696	ENSMMOG00000013597	oscp1a	86	68.696	Mola_mola
ENSOANG00000002066	LSM10	100	82.927	ENSMODG00000023328	LSM10	100	82.927	Monodelphis_domestica
ENSOANG00000002066	LSM10	59	60.256	ENSMALG00000012661	oscp1a	61	60.256	Monopterus_albus
ENSOANG00000002066	LSM10	99	77.049	MGP_CAROLIEiJ_G0026467	Lsm10	100	80.645	Mus_caroli
ENSOANG00000002066	LSM10	99	77.049	ENSMUSG00000050188	Lsm10	100	80.645	Mus_musculus
ENSOANG00000002066	LSM10	99	77.049	MGP_PahariEiJ_G0028798	Lsm10	100	80.645	Mus_pahari
ENSOANG00000002066	LSM10	99	77.049	MGP_SPRETEiJ_G0027446	Lsm10	100	80.645	Mus_spretus
ENSOANG00000002066	LSM10	100	78.862	ENSMPUG00000018593	LSM10	100	78.862	Mustela_putorius_furo
ENSOANG00000002066	LSM10	100	76.423	ENSMLUG00000023895	LSM10	100	76.423	Myotis_lucifugus
ENSOANG00000002066	LSM10	100	74.797	ENSNGAG00000015011	Lsm10	100	74.797	Nannospalax_galili
ENSOANG00000002066	LSM10	99	68.852	ENSNBRG00000014306	oscp1a	98	68.852	Neolamprologus_brichardi
ENSOANG00000002066	LSM10	100	73.984	ENSNLEG00000033754	LSM10	100	73.984	Nomascus_leucogenys
ENSOANG00000002066	LSM10	100	83.740	ENSMEUG00000006313	LSM10	100	83.740	Notamacropus_eugenii
ENSOANG00000002066	LSM10	100	77.236	ENSOPRG00000001699	LSM10	100	77.236	Ochotona_princeps
ENSOANG00000002066	LSM10	100	78.049	ENSODEG00000019161	LSM10	100	78.049	Octodon_degus
ENSOANG00000002066	LSM10	100	69.106	ENSONIG00000020904	oscp1a	100	69.106	Oreochromis_niloticus
ENSOANG00000002066	LSM10	100	77.236	ENSOCUG00000005333	LSM10	100	77.236	Oryctolagus_cuniculus
ENSOANG00000002066	LSM10	97	66.387	ENSORLG00000009504	oscp1a	98	66.387	Oryzias_latipes
ENSOANG00000002066	LSM10	97	66.387	ENSORLG00020016201	oscp1a	98	66.387	Oryzias_latipes_hni
ENSOANG00000002066	LSM10	97	64.706	ENSORLG00015007794	oscp1a	98	64.706	Oryzias_latipes_hsok
ENSOANG00000002066	LSM10	100	76.423	ENSOGAG00000002653	LSM10	100	76.423	Otolemur_garnettii
ENSOANG00000002066	LSM10	99	77.869	ENSOARG00000009596	LSM10	100	77.869	Ovis_aries
ENSOANG00000002066	LSM10	100	73.984	ENSPPAG00000023465	LSM10	100	73.984	Pan_paniscus
ENSOANG00000002066	LSM10	100	78.862	ENSPPRG00000014619	LSM10	100	78.862	Panthera_pardus
ENSOANG00000002066	LSM10	100	78.862	ENSPTIG00000004613	LSM10	100	78.862	Panthera_tigris_altaica
ENSOANG00000002066	LSM10	100	73.984	ENSPTRG00000000539	LSM10	100	73.984	Pan_troglodytes
ENSOANG00000002066	LSM10	100	73.171	ENSPANG00000023172	LSM10	100	73.171	Papio_anubis
ENSOANG00000002066	LSM10	100	65.041	ENSPKIG00000003728	oscp1a	99	65.041	Paramormyrops_kingsleyae
ENSOANG00000002066	LSM10	100	73.171	ENSPSIG00000000590	LSM10	100	73.171	Pelodiscus_sinensis
ENSOANG00000002066	LSM10	63	63.636	ENSPMGG00000015718	oscp1a	100	63.636	Periophthalmus_magnuspinnatus
ENSOANG00000002066	LSM10	84	82.524	ENSPCIG00000014865	LSM10	76	82.524	Phascolarctos_cinereus
ENSOANG00000002066	LSM10	92	68.142	ENSPFOG00000020490	oscp1a	96	68.142	Poecilia_formosa
ENSOANG00000002066	LSM10	92	68.142	ENSPLAG00000016537	oscp1a	86	68.142	Poecilia_latipinna
ENSOANG00000002066	LSM10	89	68.807	ENSPMEG00000000174	oscp1a	95	68.807	Poecilia_mexicana
ENSOANG00000002066	LSM10	95	64.957	ENSPREG00000009899	oscp1a	89	64.957	Poecilia_reticulata
ENSOANG00000002066	LSM10	100	73.984	ENSPPYG00000001539	LSM10	100	73.984	Pongo_abelii
ENSOANG00000002066	LSM10	96	76.271	ENSPCAG00000002520	LSM10	97	76.271	Procavia_capensis
ENSOANG00000002066	LSM10	100	76.423	ENSPVAG00000008644	LSM10	100	76.423	Pteropus_vampyrus
ENSOANG00000002066	LSM10	98	68.595	ENSPNYG00000003138	oscp1a	98	68.595	Pundamilia_nyererei
ENSOANG00000002066	LSM10	95	65.812	ENSPNAG00000028829	oscp1a	97	65.812	Pygocentrus_nattereri
ENSOANG00000002066	LSM10	99	76.230	ENSRNOG00000025716	Lsm10	100	76.230	Rattus_norvegicus
ENSOANG00000002066	LSM10	100	73.171	ENSRBIG00000001561	LSM10	100	73.171	Rhinopithecus_bieti
ENSOANG00000002066	LSM10	100	73.171	ENSRROG00000011414	LSM10	100	73.171	Rhinopithecus_roxellana
ENSOANG00000002066	LSM10	100	74.797	ENSSBOG00000036413	-	100	74.797	Saimiri_boliviensis_boliviensis
ENSOANG00000002066	LSM10	100	83.740	ENSSHAG00000018056	LSM10	100	83.740	Sarcophilus_harrisii
ENSOANG00000002066	LSM10	99	68.852	ENSSFOG00015019954	lsm10	100	68.852	Scleropages_formosus
ENSOANG00000002066	LSM10	96	68.644	ENSSMAG00000001297	oscp1a	100	68.644	Scophthalmus_maximus
ENSOANG00000002066	LSM10	98	65.289	ENSSDUG00000007090	oscp1a	98	65.289	Seriola_dumerili
ENSOANG00000002066	LSM10	94	66.379	ENSSLDG00000000800	oscp1a	96	66.379	Seriola_lalandi_dorsalis
ENSOANG00000002066	LSM10	100	76.800	ENSSARG00000004211	LSM10	100	77.600	Sorex_araneus
ENSOANG00000002066	LSM10	98	67.500	ENSSPAG00000009229	oscp1a	98	67.500	Stegastes_partitus
ENSOANG00000002066	LSM10	100	79.675	ENSSSCG00000038916	LSM10	100	79.675	Sus_scrofa
ENSOANG00000002066	LSM10	98	73.554	ENSTGUG00000001600	-	99	73.554	Taeniopygia_guttata
ENSOANG00000002066	LSM10	98	73.554	ENSTGUG00000001602	-	99	73.554	Taeniopygia_guttata
ENSOANG00000002066	LSM10	98	66.942	ENSTRUG00000010531	oscp1a	98	66.942	Takifugu_rubripes
ENSOANG00000002066	LSM10	100	76.423	ENSTBEG00000016674	LSM10	100	76.423	Tupaia_belangeri
ENSOANG00000002066	LSM10	100	79.675	ENSUAMG00000020265	LSM10	100	79.675	Ursus_americanus
ENSOANG00000002066	LSM10	100	79.675	ENSUMAG00000001438	LSM10	57	79.675	Ursus_maritimus
ENSOANG00000002066	LSM10	100	78.862	ENSVVUG00000023209	LSM10	100	78.862	Vulpes_vulpes
ENSOANG00000002066	LSM10	100	68.293	ENSXETG00000027631	lsm10	100	68.293	Xenopus_tropicalis
ENSOANG00000002066	LSM10	98	61.983	ENSXCOG00000018776	oscp1a	76	61.983	Xiphophorus_couchianus
ENSOANG00000002066	LSM10	89	66.055	ENSXMAG00000019963	oscp1a	87	66.055	Xiphophorus_maculatus