EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOANG00000002862 (Gene tree)
Gene ID: 100078663
Gene Symbol: SMARCA1
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Plus strand
Length: 91288 bases
Position: chr6:13772358-13863645
Accession: 11097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000004549	ResIII	PF04851.15	1.9e-11	1	1
ENSOANP00000004549	DEAD	PF00270.29	5.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000004550	SMARCA1-201	4766	-	ENSOANP00000004549	972 (aa)	-	F6U824

Gene Model

Click here to download ENSOANG00000002862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000002862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOANG00000002862	SMARCA1	51	44.681	ENSOANG00000008299	-	66	44.487
ENSOANG00000002862	SMARCA1	53	44.894	ENSOANG00000003068	CHD1L	61	44.894
ENSOANG00000002862	SMARCA1	99	88.671	ENSOANG00000013921	SMARCA5	99	88.671
ENSOANG00000002862	SMARCA1	54	47.410	ENSOANG00000005139	HELLS	66	47.410

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000002862	SMARCA1	100	93.827	ENSG00000102038	SMARCA1	92	93.827	Homo_sapiens
ENSOANG00000002862	SMARCA1	99	84.979	ENSAPOG00000016035	smarca5	98	85.120	Acanthochromis_polyacanthus
ENSOANG00000002862	SMARCA1	100	92.175	ENSAMEG00000015218	SMARCA1	92	92.175	Ailuropoda_melanoleuca
ENSOANG00000002862	SMARCA1	93	85.382	ENSACIG00000016982	smarca5	99	85.491	Amphilophus_citrinellus
ENSOANG00000002862	SMARCA1	99	84.979	ENSAOCG00000015578	smarca5	94	84.979	Amphiprion_ocellaris
ENSOANG00000002862	SMARCA1	99	84.979	ENSAPEG00000011117	smarca5	99	85.124	Amphiprion_percula
ENSOANG00000002862	SMARCA1	99	84.877	ENSATEG00000012894	smarca5	93	86.167	Anabas_testudineus
ENSOANG00000002862	SMARCA1	100	96.811	ENSAPLG00000013149	SMARCA1	99	96.811	Anas_platyrhynchos
ENSOANG00000002862	SMARCA1	100	96.914	ENSACAG00000011376	SMARCA1	93	96.914	Anolis_carolinensis
ENSOANG00000002862	SMARCA1	100	88.477	ENSANAG00000023098	SMARCA1	92	88.477	Aotus_nancymaae
ENSOANG00000002862	SMARCA1	99	85.391	ENSACLG00000025356	smarca5	94	85.391	Astatotilapia_calliptera
ENSOANG00000002862	SMARCA1	95	91.828	ENSAMXG00000011227	smarca1	97	93.958	Astyanax_mexicanus
ENSOANG00000002862	SMARCA1	99	85.952	ENSAMXG00000005709	smarca5	93	85.582	Astyanax_mexicanus
ENSOANG00000002862	SMARCA1	99	92.990	ENSBTAG00000002292	SMARCA1	91	92.196	Bos_taurus
ENSOANG00000002862	SMARCA1	99	63.739	WBGene00002169	isw-1	96	63.636	Caenorhabditis_elegans
ENSOANG00000002862	SMARCA1	100	93.724	ENSCJAG00000002868	SMARCA1	92	93.724	Callithrix_jacchus
ENSOANG00000002862	SMARCA1	100	83.418	ENSCAFG00000018673	SMARCA1	99	83.882	Canis_familiaris
ENSOANG00000002862	SMARCA1	100	93.724	ENSCAFG00020001751	SMARCA1	92	93.724	Canis_lupus_dingo
ENSOANG00000002862	SMARCA1	100	93.210	ENSCHIG00000009837	SMARCA1	92	93.210	Capra_hircus
ENSOANG00000002862	SMARCA1	100	93.519	ENSTSYG00000004240	SMARCA1	94	93.770	Carlito_syrichta
ENSOANG00000002862	SMARCA1	99	92.791	ENSCPOG00000013601	SMARCA1	92	92.791	Cavia_porcellus
ENSOANG00000002862	SMARCA1	100	90.741	ENSCCAG00000030817	SMARCA1	92	90.741	Cebus_capucinus
ENSOANG00000002862	SMARCA1	100	92.683	ENSCATG00000015921	SMARCA1	91	94.099	Cercocebus_atys
ENSOANG00000002862	SMARCA1	100	92.901	ENSCLAG00000002171	SMARCA1	92	92.901	Chinchilla_lanigera
ENSOANG00000002862	SMARCA1	100	93.827	ENSCSAG00000008460	SMARCA1	92	93.827	Chlorocebus_sabaeus
ENSOANG00000002862	SMARCA1	100	98.354	ENSCPBG00000001146	SMARCA1	92	98.354	Chrysemys_picta_bellii
ENSOANG00000002862	SMARCA1	99	74.101	ENSCING00000004110	swi/snf	96	74.101	Ciona_intestinalis
ENSOANG00000002862	SMARCA1	99	74.486	ENSCSAVG00000004620	-	100	74.833	Ciona_savignyi
ENSOANG00000002862	SMARCA1	100	93.724	ENSCANG00000007183	SMARCA1	92	93.724	Colobus_angolensis_palliatus
ENSOANG00000002862	SMARCA1	100	92.284	ENSCGRG00001010776	Smarca1	92	92.284	Cricetulus_griseus_chok1gshd
ENSOANG00000002862	SMARCA1	98	92.202	ENSCGRG00000015301	Smarca1	95	92.202	Cricetulus_griseus_crigri
ENSOANG00000002862	SMARCA1	99	84.774	ENSCSEG00000000328	smarca5	94	84.774	Cynoglossus_semilaevis
ENSOANG00000002862	SMARCA1	99	84.568	ENSCVAG00000008668	smarca5	99	84.788	Cyprinodon_variegatus
ENSOANG00000002862	SMARCA1	99	89.271	ENSDARG00000012776	smarca1	95	89.271	Danio_rerio
ENSOANG00000002862	SMARCA1	99	84.861	ENSDARG00000052348	smarca5	94	84.861	Danio_rerio
ENSOANG00000002862	SMARCA1	98	93.361	ENSDNOG00000004315	SMARCA1	92	93.361	Dasypus_novemcinctus
ENSOANG00000002862	SMARCA1	98	92.835	ENSDORG00000009270	Smarca1	91	92.835	Dipodomys_ordii
ENSOANG00000002862	SMARCA1	96	76.094	FBgn0011604	Iswi	96	73.996	Drosophila_melanogaster
ENSOANG00000002862	SMARCA1	84	92.727	ENSETEG00000017426	SMARCA1	85	92.727	Echinops_telfairi
ENSOANG00000002862	SMARCA1	100	82.922	ENSEBUG00000001239	smarca5	96	82.922	Eptatretus_burgeri
ENSOANG00000002862	SMARCA1	100	88.458	ENSEASG00005008218	SMARCA1	99	88.753	Equus_asinus_asinus
ENSOANG00000002862	SMARCA1	100	93.519	ENSECAG00000012106	SMARCA1	92	93.519	Equus_caballus
ENSOANG00000002862	SMARCA1	82	93.046	ENSEEUG00000014927	SMARCA1	82	93.046	Erinaceus_europaeus
ENSOANG00000002862	SMARCA1	99	90.825	ENSELUG00000010515	smarca1	95	91.459	Esox_lucius
ENSOANG00000002862	SMARCA1	100	93.621	ENSFCAG00000018496	SMARCA1	92	93.621	Felis_catus
ENSOANG00000002862	SMARCA1	94	97.259	ENSFALG00000000209	SMARCA1	98	97.259	Ficedula_albicollis
ENSOANG00000002862	SMARCA1	98	92.300	ENSFDAG00000009818	SMARCA1	94	92.300	Fukomys_damarensis
ENSOANG00000002862	SMARCA1	99	84.774	ENSFHEG00000007687	smarca5	93	84.774	Fundulus_heteroclitus
ENSOANG00000002862	SMARCA1	97	97.466	ENSGALG00000008431	SMARCA1	94	97.466	Gallus_gallus
ENSOANG00000002862	SMARCA1	99	84.979	ENSGAFG00000017731	smarca5	94	84.979	Gambusia_affinis
ENSOANG00000002862	SMARCA1	100	98.354	ENSGAGG00000023575	SMARCA1	100	98.354	Gopherus_agassizii
ENSOANG00000002862	SMARCA1	73	88.382	ENSGGOG00000012841	-	91	88.382	Gorilla_gorilla
ENSOANG00000002862	SMARCA1	100	92.387	ENSHGLG00000003080	SMARCA1	92	92.387	Heterocephalus_glaber_female
ENSOANG00000002862	SMARCA1	99	92.379	ENSHGLG00100001102	SMARCA1	97	92.379	Heterocephalus_glaber_male
ENSOANG00000002862	SMARCA1	99	84.877	ENSHCOG00000005458	smarca5	94	84.877	Hippocampus_comes
ENSOANG00000002862	SMARCA1	99	90.176	ENSIPUG00000016905	Smarca1	98	90.176	Ictalurus_punctatus
ENSOANG00000002862	SMARCA1	99	85.170	ENSIPUG00000005229	SMARCA5	96	85.170	Ictalurus_punctatus
ENSOANG00000002862	SMARCA1	100	93.724	ENSSTOG00000014524	SMARCA1	94	93.718	Ictidomys_tridecemlineatus
ENSOANG00000002862	SMARCA1	100	93.004	ENSJJAG00000002593	Smarca1	92	93.004	Jaculus_jaculus
ENSOANG00000002862	SMARCA1	99	84.568	ENSKMAG00000003777	smarca5	94	84.568	Kryptolebias_marmoratus
ENSOANG00000002862	SMARCA1	94	86.090	ENSLBEG00000013295	SMARCA1	100	86.346	Labrus_bergylta
ENSOANG00000002862	SMARCA1	99	84.568	ENSLBEG00000018112	smarca5	94	84.568	Labrus_bergylta
ENSOANG00000002862	SMARCA1	100	94.239	ENSLACG00000016697	SMARCA1	96	94.239	Latimeria_chalumnae
ENSOANG00000002862	SMARCA1	99	92.997	ENSLOCG00000014591	smarca1	95	92.997	Lepisosteus_oculatus
ENSOANG00000002862	SMARCA1	99	93.203	ENSLAFG00000000896	SMARCA1	97	93.203	Loxodonta_africana
ENSOANG00000002862	SMARCA1	100	93.827	ENSMFAG00000002117	SMARCA1	94	94.093	Macaca_fascicularis
ENSOANG00000002862	SMARCA1	100	92.683	ENSMMUG00000008818	SMARCA1	98	94.087	Macaca_mulatta
ENSOANG00000002862	SMARCA1	100	92.683	ENSMNEG00000041768	SMARCA1	94	94.093	Macaca_nemestrina
ENSOANG00000002862	SMARCA1	100	93.827	ENSMLEG00000043198	SMARCA1	92	93.827	Mandrillus_leucophaeus
ENSOANG00000002862	SMARCA1	99	84.979	ENSMAMG00000014294	smarca5	93	84.979	Mastacembelus_armatus
ENSOANG00000002862	SMARCA1	99	85.391	ENSMZEG00005009369	smarca5	94	85.391	Maylandia_zebra
ENSOANG00000002862	SMARCA1	100	95.833	ENSMGAG00000007042	SMARCA1	97	95.833	Meleagris_gallopavo
ENSOANG00000002862	SMARCA1	98	92.413	ENSMAUG00000008133	Smarca1	91	92.413	Mesocricetus_auratus
ENSOANG00000002862	SMARCA1	100	93.930	ENSMICG00000015768	SMARCA1	92	93.930	Microcebus_murinus
ENSOANG00000002862	SMARCA1	100	92.284	ENSMOCG00000009464	Smarca1	91	92.284	Microtus_ochrogaster
ENSOANG00000002862	SMARCA1	99	83.333	ENSMMOG00000005547	smarca5	98	83.333	Mola_mola
ENSOANG00000002862	SMARCA1	100	97.840	ENSMODG00000013187	-	94	97.840	Monodelphis_domestica
ENSOANG00000002862	SMARCA1	99	84.671	ENSMALG00000002081	smarca5	95	85.115	Monopterus_albus
ENSOANG00000002862	SMARCA1	100	92.387	MGP_CAROLIEiJ_G0033034	Smarca1	92	92.387	Mus_caroli
ENSOANG00000002862	SMARCA1	100	92.387	ENSMUSG00000031099	Smarca1	92	92.387	Mus_musculus
ENSOANG00000002862	SMARCA1	100	92.181	MGP_PahariEiJ_G0031579	Smarca1	92	92.181	Mus_pahari
ENSOANG00000002862	SMARCA1	100	92.387	MGP_SPRETEiJ_G0034192	Smarca1	92	92.387	Mus_spretus
ENSOANG00000002862	SMARCA1	100	92.378	ENSMPUG00000017423	SMARCA1	87	92.378	Mustela_putorius_furo
ENSOANG00000002862	SMARCA1	100	90.872	ENSMLUG00000029614	SMARCA1	92	90.872	Myotis_lucifugus
ENSOANG00000002862	SMARCA1	98	93.256	ENSNGAG00000006492	Smarca1	91	93.256	Nannospalax_galili
ENSOANG00000002862	SMARCA1	99	85.391	ENSNBRG00000004463	smarca5	97	85.391	Neolamprologus_brichardi
ENSOANG00000002862	SMARCA1	100	92.073	ENSNLEG00000015179	SMARCA1	95	93.361	Nomascus_leucogenys
ENSOANG00000002862	SMARCA1	94	87.879	ENSMEUG00000008819	SMARCA1	97	87.879	Notamacropus_eugenii
ENSOANG00000002862	SMARCA1	98	92.092	ENSODEG00000012163	SMARCA1	91	92.092	Octodon_degus
ENSOANG00000002862	SMARCA1	99	85.391	ENSONIG00000009993	smarca5	94	85.391	Oreochromis_niloticus
ENSOANG00000002862	SMARCA1	100	93.313	ENSOCUG00000001047	SMARCA1	92	93.313	Oryctolagus_cuniculus
ENSOANG00000002862	SMARCA1	99	85.288	ENSORLG00000021998	smarca5	93	85.288	Oryzias_latipes
ENSOANG00000002862	SMARCA1	99	85.391	ENSORLG00020017679	smarca5	93	85.391	Oryzias_latipes_hni
ENSOANG00000002862	SMARCA1	99	85.288	ENSORLG00015017210	smarca5	93	85.288	Oryzias_latipes_hsok
ENSOANG00000002862	SMARCA1	99	85.288	ENSOMEG00000000086	smarca5	94	85.288	Oryzias_melastigma
ENSOANG00000002862	SMARCA1	98	93.132	ENSOGAG00000004399	SMARCA1	91	93.132	Otolemur_garnettii
ENSOANG00000002862	SMARCA1	100	93.210	ENSOARG00000014638	SMARCA1	99	93.210	Ovis_aries
ENSOANG00000002862	SMARCA1	100	93.827	ENSPPAG00000034647	SMARCA1	92	93.827	Pan_paniscus
ENSOANG00000002862	SMARCA1	100	93.621	ENSPPRG00000008929	SMARCA1	92	93.621	Panthera_pardus
ENSOANG00000002862	SMARCA1	100	91.608	ENSPTIG00000000915	SMARCA1	95	91.608	Panthera_tigris_altaica
ENSOANG00000002862	SMARCA1	100	93.827	ENSPTRG00000049876	SMARCA1	91	94.099	Pan_troglodytes
ENSOANG00000002862	SMARCA1	100	93.827	ENSPANG00000003871	SMARCA1	92	93.827	Papio_anubis
ENSOANG00000002862	SMARCA1	95	90.870	ENSPKIG00000013411	smarca1	96	90.651	Paramormyrops_kingsleyae
ENSOANG00000002862	SMARCA1	100	98.148	ENSPSIG00000010101	SMARCA1	100	98.148	Pelodiscus_sinensis
ENSOANG00000002862	SMARCA1	98	92.835	ENSPEMG00000017503	Smarca1	91	92.835	Peromyscus_maniculatus_bairdii
ENSOANG00000002862	SMARCA1	100	98.457	ENSPCIG00000015460	SMARCA1	95	98.457	Phascolarctos_cinereus
ENSOANG00000002862	SMARCA1	99	84.877	ENSPFOG00000007649	smarca5	94	84.877	Poecilia_formosa
ENSOANG00000002862	SMARCA1	99	84.877	ENSPLAG00000003363	smarca5	94	84.877	Poecilia_latipinna
ENSOANG00000002862	SMARCA1	99	84.979	ENSPMEG00000019849	smarca5	94	84.979	Poecilia_mexicana
ENSOANG00000002862	SMARCA1	99	84.979	ENSPREG00000023250	smarca5	94	84.979	Poecilia_reticulata
ENSOANG00000002862	SMARCA1	100	90.947	ENSPPYG00000020703	SMARCA1	92	90.947	Pongo_abelii
ENSOANG00000002862	SMARCA1	83	83.718	ENSPCOG00000020722	SMARCA1	94	89.396	Propithecus_coquereli
ENSOANG00000002862	SMARCA1	91	91.892	ENSPVAG00000003805	SMARCA1	91	85.848	Pteropus_vampyrus
ENSOANG00000002862	SMARCA1	59	87.887	ENSPNYG00000012299	smarca5	88	87.887	Pundamilia_nyererei
ENSOANG00000002862	SMARCA1	100	92.284	ENSRNOG00000003762	Smarca1	92	92.284	Rattus_norvegicus
ENSOANG00000002862	SMARCA1	100	93.724	ENSRROG00000034167	SMARCA1	92	93.724	Rhinopithecus_roxellana
ENSOANG00000002862	SMARCA1	100	93.724	ENSSBOG00000020641	SMARCA1	99	93.724	Saimiri_boliviensis_boliviensis
ENSOANG00000002862	SMARCA1	100	89.620	ENSSHAG00000013518	SMARCA1	99	89.620	Sarcophilus_harrisii
ENSOANG00000002862	SMARCA1	99	91.068	ENSSFOG00015009043	smarca1	95	91.068	Scleropages_formosus
ENSOANG00000002862	SMARCA1	99	85.258	ENSSFOG00015016794	smarca5	100	85.258	Scleropages_formosus
ENSOANG00000002862	SMARCA1	99	84.259	ENSSMAG00000004801	smarca5	94	84.259	Scophthalmus_maximus
ENSOANG00000002862	SMARCA1	99	84.568	ENSSDUG00000020690	smarca5	94	84.568	Seriola_dumerili
ENSOANG00000002862	SMARCA1	99	84.568	ENSSLDG00000025190	smarca5	94	84.568	Seriola_lalandi_dorsalis
ENSOANG00000002862	SMARCA1	84	92.908	ENSSARG00000000842	SMARCA1	83	92.908	Sorex_araneus
ENSOANG00000002862	SMARCA1	98	97.050	ENSSPUG00000000590	SMARCA1	92	97.050	Sphenodon_punctatus
ENSOANG00000002862	SMARCA1	99	85.082	ENSSPAG00000002894	smarca5	97	85.230	Stegastes_partitus
ENSOANG00000002862	SMARCA1	99	93.402	ENSSSCG00000012649	SMARCA1	94	93.409	Sus_scrofa
ENSOANG00000002862	SMARCA1	100	96.502	ENSTGUG00000003899	-	99	96.502	Taeniopygia_guttata
ENSOANG00000002862	SMARCA1	99	85.185	ENSTRUG00000014094	smarca5	94	85.185	Takifugu_rubripes
ENSOANG00000002862	SMARCA1	99	83.745	ENSTNIG00000017717	smarca5	93	83.745	Tetraodon_nigroviridis
ENSOANG00000002862	SMARCA1	92	91.372	ENSTBEG00000014973	SMARCA1	91	91.372	Tupaia_belangeri
ENSOANG00000002862	SMARCA1	98	89.490	ENSTTRG00000006168	SMARCA1	97	89.490	Tursiops_truncatus
ENSOANG00000002862	SMARCA1	100	93.313	ENSUAMG00000020201	SMARCA1	92	93.313	Ursus_americanus
ENSOANG00000002862	SMARCA1	99	89.186	ENSUMAG00000004073	SMARCA1	96	92.383	Ursus_maritimus
ENSOANG00000002862	SMARCA1	79	93.831	ENSVPAG00000010492	-	79	93.831	Vicugna_pacos
ENSOANG00000002862	SMARCA1	100	93.724	ENSVVUG00000008878	SMARCA1	99	93.994	Vulpes_vulpes
ENSOANG00000002862	SMARCA1	99	93.416	ENSXETG00000001526	smarca1	97	93.416	Xenopus_tropicalis
ENSOANG00000002862	SMARCA1	99	84.877	ENSXCOG00000011170	smarca5	96	84.877	Xiphophorus_couchianus
ENSOANG00000002862	SMARCA1	99	84.877	ENSXMAG00000009678	smarca5	97	86.075	Xiphophorus_maculatus