EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOANG00000004638 (Gene tree)
Gene ID: 103170388
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Minus strand
Length: 8325 bases
Position: chr7:18365850-18374174
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000007349	LSM	PF01423.22	3.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000007351	-	360	-	ENSOANP00000007349	119 (aa)	-	F7FVB2

Gene Model

Click here to download ENSOANG00000004638's gene model file

Pathways

Pathway ID	Pathway Name	Source
oaa03040	Spliceosome	KEGG
oaa05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000004638's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOANG00000004638	-	55	36.765	ENSOANG00000005398	LSM2	90	34.066
ENSOANG00000004638	-	60	30.986	ENSOANG00000002066	LSM10	58	30.986
ENSOANG00000004638	-	85	33.333	ENSOANG00000002463	SNRPD3	56	34.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000004638	-	82	88.776	ENSG00000167088	SNRPD1	82	88.776	Homo_sapiens
ENSOANG00000004638	-	82	86.735	ENSAPOG00000019446	snrpd1	54	86.735	Acanthochromis_polyacanthus
ENSOANG00000004638	-	82	88.776	ENSAMEG00000002576	SNRPD1	84	88.776	Ailuropoda_melanoleuca
ENSOANG00000004638	-	80	86.316	ENSACIG00000011263	snrpd1	85	86.316	Amphilophus_citrinellus
ENSOANG00000004638	-	82	86.735	ENSAOCG00000007406	snrpd1	82	86.735	Amphiprion_ocellaris
ENSOANG00000004638	-	80	86.316	ENSAPEG00000012539	SNRPD1	85	86.316	Amphiprion_percula
ENSOANG00000004638	-	82	81.633	ENSAPEG00000014961	snrpd1	82	81.633	Amphiprion_percula
ENSOANG00000004638	-	82	86.735	ENSATEG00000014399	snrpd1	85	86.316	Anabas_testudineus
ENSOANG00000004638	-	82	88.776	ENSAPLG00000012256	SNRPD1	82	88.776	Anas_platyrhynchos
ENSOANG00000004638	-	82	88.776	ENSACAG00000006364	SNRPD1	82	88.776	Anolis_carolinensis
ENSOANG00000004638	-	82	88.776	ENSANAG00000025641	SNRPD1	82	88.776	Aotus_nancymaae
ENSOANG00000004638	-	80	86.316	ENSACLG00000017406	snrpd1	85	86.316	Astatotilapia_calliptera
ENSOANG00000004638	-	82	86.735	ENSAMXG00000004589	snrpd1	82	86.735	Astyanax_mexicanus
ENSOANG00000004638	-	82	86.598	ENSBTAG00000055316	-	84	86.598	Bos_taurus
ENSOANG00000004638	-	82	86.735	ENSBTAG00000047266	-	82	86.735	Bos_taurus
ENSOANG00000004638	-	76	87.778	ENSBTAG00000012376	-	84	75.893	Bos_taurus
ENSOANG00000004638	-	82	88.776	ENSBTAG00000008292	SNRPD1	82	88.776	Bos_taurus
ENSOANG00000004638	-	71	73.810	WBGene00004916	snr-3	71	70.000	Caenorhabditis_elegans
ENSOANG00000004638	-	82	88.776	ENSCJAG00000042955	SNRPD1	82	88.776	Callithrix_jacchus
ENSOANG00000004638	-	82	88.776	ENSCAFG00000018247	SNRPD1	82	88.776	Canis_familiaris
ENSOANG00000004638	-	76	90.000	ENSCAFG00020015914	SNRPD1	70	90.000	Canis_lupus_dingo
ENSOANG00000004638	-	82	88.776	ENSCHIG00000005557	SNRPD1	82	88.776	Capra_hircus
ENSOANG00000004638	-	82	88.776	ENSTSYG00000030028	SNRPD1	82	88.776	Carlito_syrichta
ENSOANG00000004638	-	82	87.755	ENSCAPG00000008103	SNRPD1	84	87.755	Cavia_aperea
ENSOANG00000004638	-	82	88.776	ENSCPOG00000004679	SNRPD1	84	87.755	Cavia_porcellus
ENSOANG00000004638	-	82	86.735	ENSCCAG00000016652	-	82	86.735	Cebus_capucinus
ENSOANG00000004638	-	82	86.735	ENSCCAG00000005390	-	82	86.735	Cebus_capucinus
ENSOANG00000004638	-	82	88.776	ENSCCAG00000032658	SNRPD1	82	88.776	Cebus_capucinus
ENSOANG00000004638	-	82	87.755	ENSCCAG00000020611	-	82	87.755	Cebus_capucinus
ENSOANG00000004638	-	82	88.776	ENSCATG00000039978	SNRPD1	82	88.776	Cercocebus_atys
ENSOANG00000004638	-	82	88.776	ENSCLAG00000008691	SNRPD1	82	88.776	Chinchilla_lanigera
ENSOANG00000004638	-	82	88.776	ENSCSAG00000017654	SNRPD1	82	88.776	Chlorocebus_sabaeus
ENSOANG00000004638	-	82	88.776	ENSCPBG00000023143	SNRPD1	82	88.776	Chrysemys_picta_bellii
ENSOANG00000004638	-	69	80.488	ENSCING00000024100	-	66	80.488	Ciona_intestinalis
ENSOANG00000004638	-	70	77.108	ENSCSAVG00000004578	-	66	78.049	Ciona_savignyi
ENSOANG00000004638	-	82	88.776	ENSCGRG00001021055	-	82	88.776	Cricetulus_griseus_chok1gshd
ENSOANG00000004638	-	76	65.556	ENSCGRG00001009945	-	78	66.292	Cricetulus_griseus_chok1gshd
ENSOANG00000004638	-	82	88.776	ENSCGRG00000000490	-	82	88.776	Cricetulus_griseus_crigri
ENSOANG00000004638	-	76	65.556	ENSCGRG00000006224	-	78	66.292	Cricetulus_griseus_crigri
ENSOANG00000004638	-	82	85.714	ENSCSEG00000018141	snrpd1	82	85.714	Cynoglossus_semilaevis
ENSOANG00000004638	-	82	86.735	ENSCVAG00000000534	snrpd1	82	86.735	Cyprinodon_variegatus
ENSOANG00000004638	-	82	86.735	ENSDARG00000011648	snrpd1	95	87.778	Danio_rerio
ENSOANG00000004638	-	82	88.776	ENSDNOG00000040310	SNRPD1	82	88.776	Dasypus_novemcinctus
ENSOANG00000004638	-	82	88.776	ENSDORG00000008349	Snrpd1	82	88.776	Dipodomys_ordii
ENSOANG00000004638	-	76	75.556	FBgn0261933	SmD1	73	75.556	Drosophila_melanogaster
ENSOANG00000004638	-	60	87.324	ENSETEG00000011689	SNRPD1	60	87.324	Echinops_telfairi
ENSOANG00000004638	-	82	84.694	ENSEBUG00000003170	snrpd1	89	85.556	Eptatretus_burgeri
ENSOANG00000004638	-	80	88.421	ENSEASG00005002433	SNRPD1	85	88.421	Equus_asinus_asinus
ENSOANG00000004638	-	80	88.421	ENSECAG00000014373	SNRPD1	85	88.421	Equus_caballus
ENSOANG00000004638	-	75	89.888	ENSEEUG00000004987	SNRPD1	100	89.888	Erinaceus_europaeus
ENSOANG00000004638	-	90	77.570	ENSELUG00000000088	snrpd1	76	86.667	Esox_lucius
ENSOANG00000004638	-	82	88.776	ENSFCAG00000012352	SNRPD1	82	88.776	Felis_catus
ENSOANG00000004638	-	80	88.421	ENSFALG00000002646	SNRPD1	85	88.421	Ficedula_albicollis
ENSOANG00000004638	-	82	86.735	ENSGMOG00000015607	snrpd1	82	86.735	Gadus_morhua
ENSOANG00000004638	-	82	88.776	ENSGALG00000041334	SNRPD1	82	88.776	Gallus_gallus
ENSOANG00000004638	-	82	86.735	ENSGAFG00000011171	snrpd1	82	86.735	Gambusia_affinis
ENSOANG00000004638	-	82	86.735	ENSGACG00000005201	SNRPD1	82	86.735	Gasterosteus_aculeatus
ENSOANG00000004638	-	82	88.776	ENSGAGG00000011197	SNRPD1	82	88.776	Gopherus_agassizii
ENSOANG00000004638	-	82	88.776	ENSGGOG00000041053	SNRPD1	82	88.776	Gorilla_gorilla
ENSOANG00000004638	-	76	84.444	ENSGGOG00000026706	-	75	84.444	Gorilla_gorilla
ENSOANG00000004638	-	82	86.735	ENSHBUG00000003236	snrpd1	82	86.735	Haplochromis_burtoni
ENSOANG00000004638	-	82	88.776	ENSHGLG00000007152	SNRPD1	82	88.776	Heterocephalus_glaber_female
ENSOANG00000004638	-	82	88.776	ENSHGLG00100008618	SNRPD1	82	88.776	Heterocephalus_glaber_male
ENSOANG00000004638	-	82	86.735	ENSIPUG00000003576	snrpd1	82	86.735	Ictalurus_punctatus
ENSOANG00000004638	-	82	88.776	ENSSTOG00000000485	SNRPD1	82	88.776	Ictidomys_tridecemlineatus
ENSOANG00000004638	-	82	88.776	ENSJJAG00000017698	Snrpd1	82	88.776	Jaculus_jaculus
ENSOANG00000004638	-	82	86.735	ENSKMAG00000005987	snrpd1	82	86.735	Kryptolebias_marmoratus
ENSOANG00000004638	-	82	86.735	ENSLBEG00000003327	snrpd1	82	86.735	Labrus_bergylta
ENSOANG00000004638	-	82	88.776	ENSLACG00000001955	SNRPD1	82	88.776	Latimeria_chalumnae
ENSOANG00000004638	-	82	86.735	ENSLOCG00000002003	snrpd1	84	86.735	Lepisosteus_oculatus
ENSOANG00000004638	-	82	88.776	ENSLAFG00000005819	SNRPD1	83	88.776	Loxodonta_africana
ENSOANG00000004638	-	82	88.776	ENSMFAG00000042080	SNRPD1	82	88.776	Macaca_fascicularis
ENSOANG00000004638	-	82	88.660	ENSMMUG00000003992	SNRPD1	83	88.660	Macaca_mulatta
ENSOANG00000004638	-	82	88.776	ENSMNEG00000041296	SNRPD1	82	88.776	Macaca_nemestrina
ENSOANG00000004638	-	82	88.776	ENSMLEG00000028659	SNRPD1	82	88.776	Mandrillus_leucophaeus
ENSOANG00000004638	-	82	86.735	ENSMAMG00000012971	snrpd1	82	86.735	Mastacembelus_armatus
ENSOANG00000004638	-	82	86.735	ENSMZEG00005004685	snrpd1	82	86.735	Maylandia_zebra
ENSOANG00000004638	-	83	88.889	ENSMGAG00000011598	SNRPD1	82	88.889	Meleagris_gallopavo
ENSOANG00000004638	-	80	87.368	ENSMAUG00000006829	-	59	90.000	Mesocricetus_auratus
ENSOANG00000004638	-	76	75.556	ENSMAUG00000016502	-	81	75.556	Mesocricetus_auratus
ENSOANG00000004638	-	76	75.556	ENSMAUG00000016467	-	81	75.556	Mesocricetus_auratus
ENSOANG00000004638	-	82	88.776	ENSMICG00000044066	SNRPD1	82	88.776	Microcebus_murinus
ENSOANG00000004638	-	82	88.776	ENSMOCG00000017367	Snrpd1	82	88.776	Microtus_ochrogaster
ENSOANG00000004638	-	82	86.735	ENSMMOG00000019089	snrpd1	82	86.735	Mola_mola
ENSOANG00000004638	-	82	88.776	ENSMODG00000021487	SNRPD1	84	88.660	Monodelphis_domestica
ENSOANG00000004638	-	82	86.735	ENSMALG00000014459	snrpd1	82	86.735	Monopterus_albus
ENSOANG00000004638	-	82	88.776	MGP_CAROLIEiJ_G0021994	Snrpd1	82	88.776	Mus_caroli
ENSOANG00000004638	-	82	88.776	ENSMUSG00000002477	Snrpd1	82	88.776	Mus_musculus
ENSOANG00000004638	-	82	88.776	MGP_PahariEiJ_G0018731	Snrpd1	82	88.776	Mus_pahari
ENSOANG00000004638	-	82	88.776	MGP_SPRETEiJ_G0022910	Snrpd1	82	88.776	Mus_spretus
ENSOANG00000004638	-	82	87.755	ENSMPUG00000020041	-	82	87.755	Mustela_putorius_furo
ENSOANG00000004638	-	82	88.776	ENSMPUG00000005567	-	84	88.776	Mustela_putorius_furo
ENSOANG00000004638	-	82	88.776	ENSMLUG00000009124	SNRPD1	76	88.776	Myotis_lucifugus
ENSOANG00000004638	-	86	85.294	ENSNGAG00000023946	Snrpd1	82	88.776	Nannospalax_galili
ENSOANG00000004638	-	76	87.912	ENSNBRG00000012119	snrpd1	74	87.778	Neolamprologus_brichardi
ENSOANG00000004638	-	82	86.735	ENSNLEG00000031430	SNRPD1	82	86.735	Nomascus_leucogenys
ENSOANG00000004638	-	82	88.776	ENSODEG00000005764	SNRPD1	82	88.776	Octodon_degus
ENSOANG00000004638	-	82	86.735	ENSONIG00000002486	snrpd1	82	86.735	Oreochromis_niloticus
ENSOANG00000004638	-	82	88.776	ENSOCUG00000023761	-	84	88.776	Oryctolagus_cuniculus
ENSOANG00000004638	-	82	87.755	ENSOCUG00000014399	-	82	87.755	Oryctolagus_cuniculus
ENSOANG00000004638	-	80	86.316	ENSORLG00000012516	snrpd1	85	86.316	Oryzias_latipes
ENSOANG00000004638	-	82	86.735	ENSORLG00020005743	snrpd1	82	86.735	Oryzias_latipes_hni
ENSOANG00000004638	-	82	86.735	ENSORLG00015013402	snrpd1	82	86.735	Oryzias_latipes_hsok
ENSOANG00000004638	-	82	86.735	ENSOMEG00000011571	snrpd1	82	86.735	Oryzias_melastigma
ENSOANG00000004638	-	82	88.776	ENSOGAG00000007833	SNRPD1	82	88.776	Otolemur_garnettii
ENSOANG00000004638	-	82	88.776	ENSOARG00000003413	-	74	88.776	Ovis_aries
ENSOANG00000004638	-	82	88.776	ENSPPAG00000042593	SNRPD1	82	88.776	Pan_paniscus
ENSOANG00000004638	-	82	88.776	ENSPPRG00000002399	SNRPD1	82	88.776	Panthera_pardus
ENSOANG00000004638	-	82	60.204	ENSPPRG00000005009	-	77	60.204	Panthera_pardus
ENSOANG00000004638	-	82	88.660	ENSPTIG00000013206	SNRPD1	85	88.660	Panthera_tigris_altaica
ENSOANG00000004638	-	93	81.081	ENSPTRG00000009909	SNRPD1	82	88.776	Pan_troglodytes
ENSOANG00000004638	-	82	84.694	ENSPTRG00000050159	-	84	84.694	Pan_troglodytes
ENSOANG00000004638	-	82	88.776	ENSPANG00000023478	SNRPD1	82	88.776	Papio_anubis
ENSOANG00000004638	-	82	87.755	ENSPKIG00000003985	SNRPD1	82	87.755	Paramormyrops_kingsleyae
ENSOANG00000004638	-	80	86.316	ENSPKIG00000021610	snrpd1	85	86.316	Paramormyrops_kingsleyae
ENSOANG00000004638	-	82	86.735	ENSPMGG00000001862	snrpd1	82	86.735	Periophthalmus_magnuspinnatus
ENSOANG00000004638	-	82	88.776	ENSPEMG00000014773	-	82	88.776	Peromyscus_maniculatus_bairdii
ENSOANG00000004638	-	82	80.000	ENSPMAG00000003938	-	82	80.000	Petromyzon_marinus
ENSOANG00000004638	-	82	88.776	ENSPCIG00000020320	SNRPD1	85	88.421	Phascolarctos_cinereus
ENSOANG00000004638	-	82	86.735	ENSPFOG00000012448	SNRPD1	87	86.735	Poecilia_formosa
ENSOANG00000004638	-	82	86.735	ENSPLAG00000006738	snrpd1	87	86.735	Poecilia_latipinna
ENSOANG00000004638	-	82	86.735	ENSPMEG00000021942	snrpd1	87	86.735	Poecilia_mexicana
ENSOANG00000004638	-	82	86.735	ENSPREG00000007094	snrpd1	82	86.735	Poecilia_reticulata
ENSOANG00000004638	-	82	88.776	ENSPPYG00000025874	SNRPD1	82	88.776	Pongo_abelii
ENSOANG00000004638	-	82	88.776	ENSPCOG00000013327	SNRPD1	82	88.776	Propithecus_coquereli
ENSOANG00000004638	-	82	88.776	ENSPVAG00000005511	SNRPD1	66	88.776	Pteropus_vampyrus
ENSOANG00000004638	-	82	85.714	ENSPNAG00000017824	snrpd1	82	85.714	Pygocentrus_nattereri
ENSOANG00000004638	-	82	88.776	ENSRNOG00000013714	Snrpd1	82	88.776	Rattus_norvegicus
ENSOANG00000004638	-	82	88.776	ENSRBIG00000022996	SNRPD1	82	88.776	Rhinopithecus_bieti
ENSOANG00000004638	-	82	88.776	ENSRROG00000027640	SNRPD1	82	88.776	Rhinopithecus_roxellana
ENSOANG00000004638	-	82	88.776	ENSSBOG00000020998	SNRPD1	82	88.776	Saimiri_boliviensis_boliviensis
ENSOANG00000004638	-	82	88.776	ENSSHAG00000011791	SNRPD1	82	88.776	Sarcophilus_harrisii
ENSOANG00000004638	-	82	85.714	ENSSFOG00015022253	-	82	85.714	Scleropages_formosus
ENSOANG00000004638	-	82	85.714	ENSSFOG00015008809	-	82	85.714	Scleropages_formosus
ENSOANG00000004638	-	82	85.714	ENSSMAG00000008765	snrpd1	85	85.263	Scophthalmus_maximus
ENSOANG00000004638	-	82	85.714	ENSSDUG00000010521	snrpd1	83	85.714	Seriola_dumerili
ENSOANG00000004638	-	82	86.735	ENSSLDG00000011858	snrpd1	82	86.735	Seriola_lalandi_dorsalis
ENSOANG00000004638	-	56	92.537	ENSSARG00000004271	SNRPD1	100	92.537	Sorex_araneus
ENSOANG00000004638	-	82	88.776	ENSSPUG00000002824	SNRPD1	82	88.776	Sphenodon_punctatus
ENSOANG00000004638	-	80	86.316	ENSSPAG00000015229	snrpd1	85	86.316	Stegastes_partitus
ENSOANG00000004638	-	82	88.776	ENSSSCG00000003701	SNRPD1	85	88.421	Sus_scrofa
ENSOANG00000004638	-	83	88.889	ENSTGUG00000005095	SNRPD1	83	88.889	Taeniopygia_guttata
ENSOANG00000004638	-	80	85.263	ENSTRUG00000008977	snrpd1	85	85.263	Takifugu_rubripes
ENSOANG00000004638	-	72	81.395	ENSTNIG00000001224	snrpd1	83	81.395	Tetraodon_nigroviridis
ENSOANG00000004638	-	60	87.324	ENSTBEG00000013776	SNRPD1	81	87.324	Tupaia_belangeri
ENSOANG00000004638	-	82	88.776	ENSTTRG00000002654	SNRPD1	85	88.776	Tursiops_truncatus
ENSOANG00000004638	-	82	88.660	ENSUAMG00000013431	SNRPD1	94	89.655	Ursus_americanus
ENSOANG00000004638	-	82	88.776	ENSUMAG00000019740	SNRPD1	82	88.776	Ursus_maritimus
ENSOANG00000004638	-	82	88.776	ENSVPAG00000010056	SNRPD1	66	88.776	Vicugna_pacos
ENSOANG00000004638	-	80	88.421	ENSVVUG00000004009	SNRPD1	85	88.421	Vulpes_vulpes
ENSOANG00000004638	-	82	88.776	ENSXETG00000027354	snrpd1	82	88.776	Xenopus_tropicalis
ENSOANG00000004638	-	82	86.735	ENSXCOG00000020108	snrpd1	82	86.735	Xiphophorus_couchianus
ENSOANG00000004638	-	82	86.735	ENSXMAG00000003368	snrpd1	82	86.735	Xiphophorus_maculatus