EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOANG00000004891 (Gene tree)
Gene ID: -
Gene Symbol: CHD1
Alias: -
Full Name: chromodomain helicase DNA binding protein 1
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Minus strand
Length: 73882 bases
Position: chrUltra358:1899262-1973143
Accession: 1915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000007748	ResIII	PF04851.15	2.8e-07	1	1
ENSOANP00000031519	ResIII	PF04851.15	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000040765	CHD1-202	6354	-	ENSOANP00000031519	1211 (aa)	-	K7EDB2
ENSOANT00000007750	CHD1-201	8095	-	ENSOANP00000007748	1718 (aa)	-	F7FUB5

Gene Model

Click here to download ENSOANG00000004891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000004891's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOANG00000004891	CHD1	100	62.731	ENSOANG00000004385	-	100	62.541

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000004891	CHD1	100	94.394	ENSG00000153922	CHD1	100	93.031	Homo_sapiens
ENSOANG00000004891	CHD1	75	84.523	ENSAPOG00000005764	chd1	98	82.756	Acanthochromis_polyacanthus
ENSOANG00000004891	CHD1	100	77.433	ENSAOCG00000023105	chd1	94	77.560	Amphiprion_ocellaris
ENSOANG00000004891	CHD1	100	78.922	ENSAPEG00000013544	chd1	94	78.748	Amphiprion_percula
ENSOANG00000004891	CHD1	100	77.977	ENSATEG00000010676	chd1	97	73.353	Anabas_testudineus
ENSOANG00000004891	CHD1	75	84.430	ENSAMXG00000010843	chd1	91	84.188	Astyanax_mexicanus
ENSOANG00000004891	CHD1	100	94.312	ENSCATG00000032035	CHD1	100	92.633	Cercocebus_atys
ENSOANG00000004891	CHD1	100	94.229	ENSCSAG00000015339	CHD1	100	92.575	Chlorocebus_sabaeus
ENSOANG00000004891	CHD1	59	85.288	ENSCPBG00000015831	CHD1	54	88.693	Chrysemys_picta_bellii
ENSOANG00000004891	CHD1	100	91.096	ENSCANG00000036916	CHD1	100	90.482	Colobus_angolensis_palliatus
ENSOANG00000004891	CHD1	100	93.570	ENSCGRG00001023943	Chd1	100	91.691	Cricetulus_griseus_chok1gshd
ENSOANG00000004891	CHD1	100	93.570	ENSCGRG00000008652	Chd1	100	91.691	Cricetulus_griseus_crigri
ENSOANG00000004891	CHD1	100	76.596	ENSCSEG00000009553	chd1	95	76.747	Cynoglossus_semilaevis
ENSOANG00000004891	CHD1	100	86.360	ENSEASG00005016110	CHD1	97	93.177	Equus_asinus_asinus
ENSOANG00000004891	CHD1	100	80.632	ENSELUG00000017677	chd1	93	78.544	Esox_lucius
ENSOANG00000004891	CHD1	75	84.009	ENSFHEG00000021164	chd1	89	80.766	Fundulus_heteroclitus
ENSOANG00000004891	CHD1	100	84.553	ENSGMOG00000001537	chd1	97	67.768	Gadus_morhua
ENSOANG00000004891	CHD1	100	91.667	ENSGALG00000031327	-	96	90.724	Gallus_gallus
ENSOANG00000004891	CHD1	82	83.851	ENSGAFG00000019880	chd1	91	83.851	Gambusia_affinis
ENSOANG00000004891	CHD1	100	89.474	ENSGGOG00000011463	CHD1	97	89.309	Gorilla_gorilla
ENSOANG00000004891	CHD1	100	78.783	ENSHCOG00000014222	chd1	93	78.641	Hippocampus_comes
ENSOANG00000004891	CHD1	100	81.691	ENSIPUG00000001369	chd1	95	80.208	Ictalurus_punctatus
ENSOANG00000004891	CHD1	59	91.921	ENSLAFG00000023183	CHD1	94	91.593	Loxodonta_africana
ENSOANG00000004891	CHD1	100	94.229	ENSMFAG00000031226	CHD1	100	92.575	Macaca_fascicularis
ENSOANG00000004891	CHD1	83	92.907	ENSMMUG00000014090	CHD1	99	92.907	Macaca_mulatta
ENSOANG00000004891	CHD1	100	94.229	ENSMNEG00000045073	CHD1	100	92.638	Macaca_nemestrina
ENSOANG00000004891	CHD1	100	87.304	ENSMLEG00000041096	CHD1	97	88.200	Mandrillus_leucophaeus
ENSOANG00000004891	CHD1	75	84.632	ENSMZEG00005010957	chd1	93	81.745	Maylandia_zebra
ENSOANG00000004891	CHD1	100	89.695	ENSMOCG00000019121	Chd1	100	88.844	Microtus_ochrogaster
ENSOANG00000004891	CHD1	75	84.170	ENSMALG00000013317	chd1	95	77.591	Monopterus_albus
ENSOANG00000004891	CHD1	100	92.745	MGP_CAROLIEiJ_G0021099	Chd1	99	92.692	Mus_caroli
ENSOANG00000004891	CHD1	100	92.910	ENSMUSG00000023852	Chd1	99	92.784	Mus_musculus
ENSOANG00000004891	CHD1	100	91.921	MGP_PahariEiJ_G0023414	Chd1	99	92.791	Mus_pahari
ENSOANG00000004891	CHD1	100	77.614	ENSNBRG00000006860	chd1	93	77.228	Neolamprologus_brichardi
ENSOANG00000004891	CHD1	100	90.701	ENSNLEG00000014493	CHD1	97	90.036	Nomascus_leucogenys
ENSOANG00000004891	CHD1	59	77.362	ENSORLG00015016725	chd1	95	77.081	Oryzias_latipes_hsok
ENSOANG00000004891	CHD1	100	92.705	ENSPPAG00000043367	CHD1	100	89.763	Pan_paniscus
ENSOANG00000004891	CHD1	100	94.312	ENSPTRG00000017103	CHD1	100	92.915	Pan_troglodytes
ENSOANG00000004891	CHD1	100	94.229	ENSPANG00000006387	CHD1	100	92.575	Papio_anubis
ENSOANG00000004891	CHD1	100	84.072	ENSPKIG00000024719	chd1	97	79.295	Paramormyrops_kingsleyae
ENSOANG00000004891	CHD1	75	84.447	ENSPMGG00000005785	chd1	94	79.937	Periophthalmus_magnuspinnatus
ENSOANG00000004891	CHD1	100	93.322	ENSPEMG00000015939	Chd1	100	91.347	Peromyscus_maniculatus_bairdii
ENSOANG00000004891	CHD1	100	77.823	ENSPREG00000004209	chd1	98	73.913	Poecilia_reticulata
ENSOANG00000004891	CHD1	83	91.761	ENSRNOG00000014434	Chd1	99	91.831	Rattus_norvegicus
ENSOANG00000004891	CHD1	100	91.172	ENSRBIG00000044325	CHD1	100	90.487	Rhinopithecus_bieti
ENSOANG00000004891	CHD1	100	93.982	ENSRROG00000001726	CHD1	100	92.522	Rhinopithecus_roxellana
ENSOANG00000004891	CHD1	75	84.101	ENSSFOG00015007161	chd1	90	83.171	Scleropages_formosus
ENSOANG00000004891	CHD1	75	84.759	ENSSDUG00000018314	chd1	95	77.981	Seriola_dumerili
ENSOANG00000004891	CHD1	51	84.282	ENSSLDG00000017244	chd1	88	84.282	Seriola_lalandi_dorsalis
ENSOANG00000004891	CHD1	75	84.666	ENSSPAG00000007024	chd1	95	78.289	Stegastes_partitus
ENSOANG00000004891	CHD1	86	93.911	ENSSSCG00000014177	CHD1	100	93.572	Sus_scrofa
ENSOANG00000004891	CHD1	100	77.150	ENSTRUG00000010282	chd1	96	73.952	Takifugu_rubripes
ENSOANG00000004891	CHD1	65	85.751	ENSTNIG00000007101	chd1	95	78.264	Tetraodon_nigroviridis
ENSOANG00000004891	CHD1	100	75.226	ENSXCOG00000017184	chd1	98	71.300	Xiphophorus_couchianus
ENSOANG00000004891	CHD1	71	85.863	ENSXMAG00000014538	chd1	95	78.108	Xiphophorus_maculatus