EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOANG00000005526 (Gene tree)
Gene ID: -
Gene Symbol: PRDM4
Alias: -
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Minus strand
Length: 19899 bases
Position: chrUltra443:5230628-5250526
Accession: 9348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000008775	zf-C2H2	PF00096.26	2.5e-19	1	3
ENSOANP00000008775	zf-C2H2	PF00096.26	2.5e-19	2	3
ENSOANP00000008775	zf-C2H2	PF00096.26	2.5e-19	3	3
ENSOANP00000008777	zf-C2H2	PF00096.26	3e-19	1	3
ENSOANP00000008777	zf-C2H2	PF00096.26	3e-19	2	3
ENSOANP00000008777	zf-C2H2	PF00096.26	3e-19	3	3
ENSOANP00000008775	zf-met	PF12874.7	3.4e-05	1	1
ENSOANP00000008777	zf-met	PF12874.7	4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000008777	PRDM4-201	3322	-	ENSOANP00000008775	787 (aa)	-	F6X5J5
ENSOANT00000008779	PRDM4-202	3361	-	ENSOANP00000008777	801 (aa)	XP_001510003	F6X5H6

Gene Model

Click here to download ENSOANG00000005526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000005526's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOANG00000005526	PRDM4	53	35.366	ENSOANG00000006445	PRDM15	67	35.366
ENSOANG00000005526	PRDM4	50	43.590	ENSOANG00000005426	-	64	43.590

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000005526	PRDM4	100	90.886	ENSG00000110851	PRDM4	100	98.667	Homo_sapiens
ENSOANG00000005526	PRDM4	99	91.114	ENSAMEG00000016174	PRDM4	99	91.114	Ailuropoda_melanoleuca
ENSOANG00000005526	PRDM4	99	87.970	ENSAPLG00000009846	PRDM4	99	87.845	Anas_platyrhynchos
ENSOANG00000005526	PRDM4	100	90.512	ENSANAG00000024800	PRDM4	100	90.512	Aotus_nancymaae
ENSOANG00000005526	PRDM4	100	91.635	ENSBTAG00000012999	PRDM4	100	91.635	Bos_taurus
ENSOANG00000005526	PRDM4	100	90.512	ENSCJAG00000015261	PRDM4	100	90.512	Callithrix_jacchus
ENSOANG00000005526	PRDM4	100	91.011	ENSCAFG00000001788	PRDM4	100	91.011	Canis_familiaris
ENSOANG00000005526	PRDM4	100	91.011	ENSCAFG00020004916	PRDM4	100	91.011	Canis_lupus_dingo
ENSOANG00000005526	PRDM4	100	91.511	ENSCHIG00000019409	PRDM4	100	91.511	Capra_hircus
ENSOANG00000005526	PRDM4	100	90.637	ENSTSYG00000009248	PRDM4	100	90.637	Carlito_syrichta
ENSOANG00000005526	PRDM4	99	86.358	ENSCAPG00000013937	PRDM4	99	86.608	Cavia_aperea
ENSOANG00000005526	PRDM4	99	85.839	ENSCPOG00000022385	PRDM4	100	86.087	Cavia_porcellus
ENSOANG00000005526	PRDM4	100	90.762	ENSCCAG00000036033	PRDM4	100	90.762	Cebus_capucinus
ENSOANG00000005526	PRDM4	100	90.637	ENSCATG00000044797	PRDM4	100	90.637	Cercocebus_atys
ENSOANG00000005526	PRDM4	99	87.438	ENSCLAG00000007545	PRDM4	100	87.811	Chinchilla_lanigera
ENSOANG00000005526	PRDM4	100	90.886	ENSCSAG00000002896	PRDM4	100	90.886	Chlorocebus_sabaeus
ENSOANG00000005526	PRDM4	71	96.364	ENSCHOG00000001744	PRDM4	83	96.364	Choloepus_hoffmanni
ENSOANG00000005526	PRDM4	99	88.582	ENSCPBG00000023187	PRDM4	100	88.457	Chrysemys_picta_bellii
ENSOANG00000005526	PRDM4	100	90.762	ENSCANG00000021804	PRDM4	100	90.762	Colobus_angolensis_palliatus
ENSOANG00000005526	PRDM4	99	87.313	ENSCGRG00001015102	-	100	87.313	Cricetulus_griseus_chok1gshd
ENSOANG00000005526	PRDM4	96	87.097	ENSCGRG00000004044	-	100	87.097	Cricetulus_griseus_crigri
ENSOANG00000005526	PRDM4	100	90.137	ENSDNOG00000032478	PRDM4	100	91.261	Dasypus_novemcinctus
ENSOANG00000005526	PRDM4	99	75.784	ENSDORG00000015081	-	100	75.784	Dipodomys_ordii
ENSOANG00000005526	PRDM4	95	45.938	ENSEBUG00000003775	prdm4	99	45.592	Eptatretus_burgeri
ENSOANG00000005526	PRDM4	100	91.635	ENSECAG00000015423	PRDM4	100	91.635	Equus_caballus
ENSOANG00000005526	PRDM4	94	87.350	ENSEEUG00000006569	PRDM4	99	86.951	Erinaceus_europaeus
ENSOANG00000005526	PRDM4	99	60.875	ENSELUG00000015265	prdm4	94	62.500	Esox_lucius
ENSOANG00000005526	PRDM4	100	91.386	ENSFCAG00000022478	PRDM4	100	91.386	Felis_catus
ENSOANG00000005526	PRDM4	99	88.206	ENSFALG00000013342	PRDM4	100	88.206	Ficedula_albicollis
ENSOANG00000005526	PRDM4	100	86.800	ENSGALG00000012619	PRDM4	100	86.675	Gallus_gallus
ENSOANG00000005526	PRDM4	99	88.095	ENSGAGG00000002763	PRDM4	95	87.970	Gopherus_agassizii
ENSOANG00000005526	PRDM4	99	91.000	ENSGGOG00000001244	PRDM4	99	91.000	Gorilla_gorilla
ENSOANG00000005526	PRDM4	99	88.206	ENSHGLG00000004590	PRDM4	98	88.206	Heterocephalus_glaber_female
ENSOANG00000005526	PRDM4	99	87.081	ENSHGLG00100007464	PRDM4	100	87.081	Heterocephalus_glaber_male
ENSOANG00000005526	PRDM4	96	61.578	ENSIPUG00000024162	prdm4	94	61.578	Ictalurus_punctatus
ENSOANG00000005526	PRDM4	100	90.262	ENSSTOG00000016168	PRDM4	100	90.262	Ictidomys_tridecemlineatus
ENSOANG00000005526	PRDM4	82	86.559	ENSJJAG00000022448	-	95	86.559	Jaculus_jaculus
ENSOANG00000005526	PRDM4	99	73.762	ENSLACG00000007452	PRDM4	99	74.134	Latimeria_chalumnae
ENSOANG00000005526	PRDM4	79	41.689	ENSLOCG00000017092	prdm4	93	53.680	Lepisosteus_oculatus
ENSOANG00000005526	PRDM4	98	91.497	ENSLAFG00000001483	PRDM4	100	91.497	Loxodonta_africana
ENSOANG00000005526	PRDM4	100	90.886	ENSMFAG00000041862	PRDM4	100	90.886	Macaca_fascicularis
ENSOANG00000005526	PRDM4	100	90.886	ENSMMUG00000015550	PRDM4	100	90.886	Macaca_mulatta
ENSOANG00000005526	PRDM4	100	90.637	ENSMNEG00000032319	PRDM4	100	90.637	Macaca_nemestrina
ENSOANG00000005526	PRDM4	100	90.762	ENSMLEG00000039607	PRDM4	100	90.762	Mandrillus_leucophaeus
ENSOANG00000005526	PRDM4	99	78.908	ENSMGAG00000012815	PRDM4	100	78.784	Meleagris_gallopavo
ENSOANG00000005526	PRDM4	100	89.888	ENSMICG00000007807	PRDM4	100	89.888	Microcebus_murinus
ENSOANG00000005526	PRDM4	99	88.095	ENSMOCG00000000753	Prdm4	99	88.095	Microtus_ochrogaster
ENSOANG00000005526	PRDM4	99	88.206	ENSMUSG00000035529	Prdm4	100	88.206	Mus_musculus
ENSOANG00000005526	PRDM4	99	87.955	MGP_PahariEiJ_G0031398	Prdm4	100	87.955	Mus_pahari
ENSOANG00000005526	PRDM4	99	88.833	MGP_SPRETEiJ_G0016505	Prdm4	100	88.833	Mus_spretus
ENSOANG00000005526	PRDM4	99	85.287	ENSMPUG00000012238	PRDM4	99	84.539	Mustela_putorius_furo
ENSOANG00000005526	PRDM4	99	90.476	ENSMLUG00000000767	PRDM4	99	90.476	Myotis_lucifugus
ENSOANG00000005526	PRDM4	99	89.837	ENSNGAG00000018627	Prdm4	100	89.837	Nannospalax_galili
ENSOANG00000005526	PRDM4	100	90.762	ENSNLEG00000006748	PRDM4	100	90.762	Nomascus_leucogenys
ENSOANG00000005526	PRDM4	89	90.610	ENSMEUG00000004495	PRDM4	89	90.610	Notamacropus_eugenii
ENSOANG00000005526	PRDM4	88	90.774	ENSOPRG00000010192	PRDM4	89	90.774	Ochotona_princeps
ENSOANG00000005526	PRDM4	99	87.000	ENSODEG00000014750	PRDM4	99	87.000	Octodon_degus
ENSOANG00000005526	PRDM4	95	91.273	ENSOCUG00000012859	PRDM4	96	91.273	Oryctolagus_cuniculus
ENSOANG00000005526	PRDM4	99	90.841	ENSOGAG00000011945	PRDM4	100	90.841	Otolemur_garnettii
ENSOANG00000005526	PRDM4	100	91.261	ENSOARG00000017955	PRDM4	100	91.261	Ovis_aries
ENSOANG00000005526	PRDM4	100	91.011	ENSPPAG00000038438	PRDM4	100	91.011	Pan_paniscus
ENSOANG00000005526	PRDM4	100	91.386	ENSPPRG00000004144	PRDM4	100	91.386	Panthera_pardus
ENSOANG00000005526	PRDM4	100	91.386	ENSPTIG00000005847	PRDM4	100	91.386	Panthera_tigris_altaica
ENSOANG00000005526	PRDM4	100	90.886	ENSPTRG00000005400	PRDM4	100	90.886	Pan_troglodytes
ENSOANG00000005526	PRDM4	100	90.886	ENSPANG00000022084	PRDM4	100	90.886	Papio_anubis
ENSOANG00000005526	PRDM4	99	60.570	ENSPKIG00000000875	prdm4	93	62.977	Paramormyrops_kingsleyae
ENSOANG00000005526	PRDM4	81	92.265	ENSPSIG00000012066	PRDM4	100	92.265	Pelodiscus_sinensis
ENSOANG00000005526	PRDM4	99	89.210	ENSPEMG00000014598	Prdm4	100	89.210	Peromyscus_maniculatus_bairdii
ENSOANG00000005526	PRDM4	100	88.930	ENSPCIG00000009471	PRDM4	100	88.930	Phascolarctos_cinereus
ENSOANG00000005526	PRDM4	100	90.762	ENSPPYG00000004913	PRDM4	100	90.762	Pongo_abelii
ENSOANG00000005526	PRDM4	83	97.917	ENSPCAG00000009987	PRDM4	83	97.917	Procavia_capensis
ENSOANG00000005526	PRDM4	100	89.763	ENSPCOG00000021060	PRDM4	100	89.763	Propithecus_coquereli
ENSOANG00000005526	PRDM4	100	90.274	ENSPVAG00000001596	PRDM4	100	90.025	Pteropus_vampyrus
ENSOANG00000005526	PRDM4	99	88.471	ENSRNOG00000004962	Prdm4	100	88.722	Rattus_norvegicus
ENSOANG00000005526	PRDM4	100	90.762	ENSRBIG00000035488	PRDM4	100	90.762	Rhinopithecus_bieti
ENSOANG00000005526	PRDM4	100	90.886	ENSRROG00000012779	PRDM4	100	90.886	Rhinopithecus_roxellana
ENSOANG00000005526	PRDM4	100	90.762	ENSSBOG00000000403	PRDM4	100	90.762	Saimiri_boliviensis_boliviensis
ENSOANG00000005526	PRDM4	99	64.699	ENSSFOG00015023358	prdm4	99	63.961	Scleropages_formosus
ENSOANG00000005526	PRDM4	100	91.136	ENSSSCG00000000160	PRDM4	100	91.136	Sus_scrofa
ENSOANG00000005526	PRDM4	99	88.346	ENSTGUG00000010962	-	99	88.346	Taeniopygia_guttata
ENSOANG00000005526	PRDM4	74	83.276	ENSTBEG00000001732	PRDM4	84	83.276	Tupaia_belangeri
ENSOANG00000005526	PRDM4	100	91.011	ENSTTRG00000011056	PRDM4	100	91.011	Tursiops_truncatus
ENSOANG00000005526	PRDM4	100	91.760	ENSUAMG00000022796	PRDM4	100	91.760	Ursus_americanus
ENSOANG00000005526	PRDM4	100	91.760	ENSUMAG00000017231	PRDM4	100	91.760	Ursus_maritimus
ENSOANG00000005526	PRDM4	99	91.343	ENSVPAG00000002215	PRDM4	100	91.343	Vicugna_pacos
ENSOANG00000005526	PRDM4	100	91.011	ENSVVUG00000023397	PRDM4	100	91.011	Vulpes_vulpes