EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOANG00000005971 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Plus strand
Length: 5102 bases
Position: chrContig3654:7808-12909
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000009504	zf-C2H2	PF00096.26	1.9e-38	1	7
ENSOANP00000009504	zf-C2H2	PF00096.26	1.9e-38	2	7
ENSOANP00000009504	zf-C2H2	PF00096.26	1.9e-38	3	7
ENSOANP00000009504	zf-C2H2	PF00096.26	1.9e-38	4	7
ENSOANP00000009504	zf-C2H2	PF00096.26	1.9e-38	5	7
ENSOANP00000009504	zf-C2H2	PF00096.26	1.9e-38	6	7
ENSOANP00000009504	zf-C2H2	PF00096.26	1.9e-38	7	7
ENSOANP00000009505	zf-C2H2	PF00096.26	3.6e-36	1	7
ENSOANP00000009505	zf-C2H2	PF00096.26	3.6e-36	2	7
ENSOANP00000009505	zf-C2H2	PF00096.26	3.6e-36	3	7
ENSOANP00000009505	zf-C2H2	PF00096.26	3.6e-36	4	7
ENSOANP00000009505	zf-C2H2	PF00096.26	3.6e-36	5	7
ENSOANP00000009505	zf-C2H2	PF00096.26	3.6e-36	6	7
ENSOANP00000009505	zf-C2H2	PF00096.26	3.6e-36	7	7
ENSOANP00000009504	zf-met	PF12874.7	1.6e-09	1	1
ENSOANP00000009505	zf-met	PF12874.7	6.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000009506	-	1335	-	ENSOANP00000009504	445 (aa)	-	F6XV45
ENSOANT00000009507	-	1822	-	ENSOANP00000009505	535 (aa)	-	F6XV38

Gene Model

Click here to download ENSOANG00000005971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000005971's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOANG00000005971	-	68	36.022	ENSOANG00000010373	-	73	36.598
ENSOANG00000005971	-	55	31.690	ENSOANG00000011532	-	57	31.690
ENSOANG00000005971	-	73	79.688	ENSOANG00000031701	-	83	80.105
ENSOANG00000005971	-	92	48.214	ENSOANG00000005983	ZNF236	57	48.214
ENSOANG00000005971	-	68	47.170	ENSOANG00000014723	GFI1B	67	43.165
ENSOANG00000005971	-	94	37.113	ENSOANG00000010666	-	99	38.947
ENSOANG00000005971	-	66	44.488	ENSOANG00000010668	-	99	44.488
ENSOANG00000005971	-	64	37.500	ENSOANG00000008681	SNAI1	55	37.500
ENSOANG00000005971	-	59	41.176	ENSOANG00000001250	OVOL2	79	41.176
ENSOANG00000005971	-	71	48.214	ENSOANG00000022289	-	83	48.214
ENSOANG00000005971	-	64	49.580	ENSOANG00000030067	-	86	49.580
ENSOANG00000005971	-	64	43.210	ENSOANG00000001043	PRDM12	56	43.210
ENSOANG00000005971	-	64	39.130	ENSOANG00000004112	-	98	39.130
ENSOANG00000005971	-	64	48.980	ENSOANG00000032215	-	50	45.312
ENSOANG00000005971	-	72	30.315	ENSOANG00000014693	-	76	30.837
ENSOANG00000005971	-	52	40.000	ENSOANG00000007365	-	55	36.893
ENSOANG00000005971	-	69	34.659	ENSOANG00000009260	-	74	31.707
ENSOANG00000005971	-	69	37.553	ENSOANG00000006540	ZNF319	90	37.553
ENSOANG00000005971	-	83	34.061	ENSOANG00000015109	PRDM5	72	33.696
ENSOANG00000005971	-	65	43.023	ENSOANG00000006197	-	97	45.455
ENSOANG00000005971	-	58	47.692	ENSOANG00000003496	-	52	47.692
ENSOANG00000005971	-	65	37.555	ENSOANG00000006270	-	57	37.555
ENSOANG00000005971	-	65	40.517	ENSOANG00000015147	-	78	37.903
ENSOANG00000005971	-	72	45.255	ENSOANG00000008192	ZBTB26	54	45.255
ENSOANG00000005971	-	63	40.000	ENSOANG00000007267	SNAI2	52	40.000
ENSOANG00000005971	-	65	38.824	ENSOANG00000010793	-	76	39.161
ENSOANG00000005971	-	68	45.385	ENSOANG00000022376	-	62	45.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000005971	-	71	44.048	ENSAPEG00000021575	-	61	44.578	Amphiprion_percula
ENSOANG00000005971	-	65	41.758	ENSACLG00000017925	-	68	41.758	Astatotilapia_calliptera
ENSOANG00000005971	-	68	41.199	ENSAMXG00000037709	-	94	43.750	Astyanax_mexicanus
ENSOANG00000005971	-	71	42.731	ENSAMXG00000041609	-	92	42.731	Astyanax_mexicanus
ENSOANG00000005971	-	69	39.510	ENSCSAVG00000007918	-	99	38.811	Ciona_savignyi
ENSOANG00000005971	-	64	39.216	ENSHBUG00000012007	-	75	39.216	Haplochromis_burtoni
ENSOANG00000005971	-	65	44.886	ENSHBUG00000002307	-	71	44.886	Haplochromis_burtoni
ENSOANG00000005971	-	65	41.758	ENSMZEG00005024424	-	68	41.758	Maylandia_zebra
ENSOANG00000005971	-	70	38.710	ENSPMEG00000014701	-	67	38.356	Poecilia_mexicana
ENSOANG00000005971	-	73	36.139	ENSSDUG00000002174	-	76	36.139	Seriola_dumerili
ENSOANG00000005971	-	73	36.139	ENSSLDG00000002776	-	76	36.139	Seriola_lalandi_dorsalis
ENSOANG00000005971	-	77	42.105	ENSSLDG00000010390	-	91	42.105	Seriola_lalandi_dorsalis
ENSOANG00000005971	-	66	42.778	ENSSPAG00000008958	-	91	46.250	Stegastes_partitus
ENSOANG00000005971	-	73	40.176	ENSTGUG00000015090	-	99	43.554	Taeniopygia_guttata