EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOANG00000006735 (Gene tree)
Gene ID: -
Gene Symbol: XRN1
Alias: -
Full Name: 5'-3' exoribonuclease 1
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Plus strand
Length: 64361 bases
Position: chrUltra414:501513-565873
Accession: 30654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000010749	XRN_N	PF03159.18	1.5e-38	1	1
ENSOANP00000010746	XRN_N	PF03159.18	1.5e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000010751	XRN1-202	4783	-	ENSOANP00000010749	1580 (aa)	-	F7CSR7
ENSOANT00000010748	XRN1-201	4837	-	ENSOANP00000010746	1598 (aa)	-	F7CSV0

Gene Model

Click here to download ENSOANG00000006735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000006735's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000006735	XRN1	100	77.258	ENSG00000114127	XRN1	100	96.364	Homo_sapiens
ENSOANG00000006735	XRN1	94	70.428	ENSAPOG00000000622	xrn1	89	73.230	Acanthochromis_polyacanthus
ENSOANG00000006735	XRN1	100	75.716	ENSAMEG00000012538	XRN1	92	75.903	Ailuropoda_melanoleuca
ENSOANG00000006735	XRN1	94	70.283	ENSACIG00000001057	xrn1	90	70.374	Amphilophus_citrinellus
ENSOANG00000006735	XRN1	93	68.384	ENSAOCG00000014097	xrn1	90	68.561	Amphiprion_ocellaris
ENSOANG00000006735	XRN1	100	57.343	ENSAPEG00000006620	xrn1	84	68.045	Amphiprion_percula
ENSOANG00000006735	XRN1	99	63.347	ENSATEG00000009752	xrn1	91	66.411	Anabas_testudineus
ENSOANG00000006735	XRN1	100	74.212	ENSAPLG00000004905	XRN1	94	73.840	Anas_platyrhynchos
ENSOANG00000006735	XRN1	100	70.578	ENSACAG00000004985	XRN1	92	70.012	Anolis_carolinensis
ENSOANG00000006735	XRN1	100	77.953	ENSANAG00000029013	XRN1	87	87.375	Aotus_nancymaae
ENSOANG00000006735	XRN1	99	57.626	ENSACLG00000004806	xrn1	92	57.766	Astatotilapia_calliptera
ENSOANG00000006735	XRN1	93	66.609	ENSAMXG00000019370	xrn1	88	69.161	Astyanax_mexicanus
ENSOANG00000006735	XRN1	100	77.385	ENSBTAG00000011524	XRN1	92	77.448	Bos_taurus
ENSOANG00000006735	XRN1	67	34.269	WBGene00012730	xrn-1	72	33.446	Caenorhabditis_elegans
ENSOANG00000006735	XRN1	100	78.016	ENSCJAG00000001872	XRN1	92	78.080	Callithrix_jacchus
ENSOANG00000006735	XRN1	100	76.991	ENSCAFG00000007783	XRN1	92	77.118	Canis_familiaris
ENSOANG00000006735	XRN1	100	76.229	ENSCAFG00020009120	XRN1	85	84.286	Canis_lupus_dingo
ENSOANG00000006735	XRN1	99	76.030	ENSCHIG00000019192	XRN1	92	76.015	Capra_hircus
ENSOANG00000006735	XRN1	100	76.816	ENSTSYG00000002705	XRN1	92	76.943	Carlito_syrichta
ENSOANG00000006735	XRN1	100	78.269	ENSCCAG00000034800	XRN1	85	88.508	Cebus_capucinus
ENSOANG00000006735	XRN1	100	77.890	ENSCATG00000041794	XRN1	92	78.016	Cercocebus_atys
ENSOANG00000006735	XRN1	100	75.810	ENSCLAG00000001451	XRN1	85	88.306	Chinchilla_lanigera
ENSOANG00000006735	XRN1	100	78.016	ENSCSAG00000011265	XRN1	92	78.143	Chlorocebus_sabaeus
ENSOANG00000006735	XRN1	54	89.855	ENSCHOG00000013961	-	51	89.855	Choloepus_hoffmanni
ENSOANG00000006735	XRN1	67	40.453	ENSCSAVG00000008584	-	87	40.227	Ciona_savignyi
ENSOANG00000006735	XRN1	100	77.827	ENSCANG00000037495	XRN1	85	88.508	Colobus_angolensis_palliatus
ENSOANG00000006735	XRN1	100	75.622	ENSCGRG00001019411	Xrn1	85	87.298	Cricetulus_griseus_chok1gshd
ENSOANG00000006735	XRN1	100	75.622	ENSCGRG00000012464	Xrn1	85	87.298	Cricetulus_griseus_crigri
ENSOANG00000006735	XRN1	100	52.206	ENSCSEG00000021285	xrn1	89	76.376	Cynoglossus_semilaevis
ENSOANG00000006735	XRN1	63	68.136	ENSCVAG00000013089	xrn1	87	69.439	Cyprinodon_variegatus
ENSOANG00000006735	XRN1	99	59.396	ENSDARG00000091652	xrn1	90	79.863	Danio_rerio
ENSOANG00000006735	XRN1	100	74.312	ENSDORG00000013833	Xrn1	92	75.016	Dipodomys_ordii
ENSOANG00000006735	XRN1	70	36.978	FBgn0020261	pcm	66	36.754	Drosophila_melanogaster
ENSOANG00000006735	XRN1	86	89.189	ENSETEG00000003978	XRN1	81	89.516	Echinops_telfairi
ENSOANG00000006735	XRN1	92	85.740	ENSEASG00005002687	XRN1	93	84.389	Equus_asinus_asinus
ENSOANG00000006735	XRN1	100	77.434	ENSECAG00000008301	XRN1	92	77.560	Equus_caballus
ENSOANG00000006735	XRN1	92	74.070	ENSEEUG00000011323	XRN1	84	74.550	Erinaceus_europaeus
ENSOANG00000006735	XRN1	99	59.501	ENSELUG00000000169	xrn1	92	59.440	Esox_lucius
ENSOANG00000006735	XRN1	100	73.502	ENSFCAG00000027589	XRN1	92	73.691	Felis_catus
ENSOANG00000006735	XRN1	100	72.821	ENSFALG00000007021	XRN1	92	72.165	Ficedula_albicollis
ENSOANG00000006735	XRN1	100	75.356	ENSFDAG00000020494	XRN1	86	88.306	Fukomys_damarensis
ENSOANG00000006735	XRN1	82	65.217	ENSGMOG00000006396	xrn1	74	65.443	Gadus_morhua
ENSOANG00000006735	XRN1	100	73.103	ENSGALG00000002706	XRN1	92	72.733	Gallus_gallus
ENSOANG00000006735	XRN1	100	56.783	ENSGACG00000014328	xrn1	92	56.767	Gasterosteus_aculeatus
ENSOANG00000006735	XRN1	94	77.477	ENSGAGG00000017535	XRN1	91	77.081	Gopherus_agassizii
ENSOANG00000006735	XRN1	100	77.574	ENSGGOG00000008047	XRN1	92	77.701	Gorilla_gorilla
ENSOANG00000006735	XRN1	93	68.081	ENSHBUG00000005908	xrn1	90	72.321	Haplochromis_burtoni
ENSOANG00000006735	XRN1	100	75.993	ENSHGLG00000014476	XRN1	85	88.710	Heterocephalus_glaber_female
ENSOANG00000006735	XRN1	100	75.993	ENSHGLG00100015130	XRN1	85	88.710	Heterocephalus_glaber_male
ENSOANG00000006735	XRN1	98	66.015	ENSHCOG00000014062	xrn1	91	66.439	Hippocampus_comes
ENSOANG00000006735	XRN1	94	68.826	ENSIPUG00000015229	xrn1	90	69.171	Ictalurus_punctatus
ENSOANG00000006735	XRN1	100	76.244	ENSSTOG00000013552	XRN1	86	87.903	Ictidomys_tridecemlineatus
ENSOANG00000006735	XRN1	100	74.314	ENSJJAG00000010863	Xrn1	87	86.694	Jaculus_jaculus
ENSOANG00000006735	XRN1	94	57.218	ENSKMAG00000021356	xrn1	88	75.909	Kryptolebias_marmoratus
ENSOANG00000006735	XRN1	100	56.315	ENSLBEG00000018656	xrn1	85	74.083	Labrus_bergylta
ENSOANG00000006735	XRN1	99	66.831	ENSLACG00000009020	XRN1	92	66.523	Latimeria_chalumnae
ENSOANG00000006735	XRN1	99	63.450	ENSLOCG00000007944	xrn1	92	63.263	Lepisosteus_oculatus
ENSOANG00000006735	XRN1	59	86.066	ENSLAFG00000015426	XRN1	87	86.066	Loxodonta_africana
ENSOANG00000006735	XRN1	100	77.890	ENSMFAG00000032599	XRN1	92	78.016	Macaca_fascicularis
ENSOANG00000006735	XRN1	100	77.890	ENSMMUG00000014038	XRN1	92	78.016	Macaca_mulatta
ENSOANG00000006735	XRN1	100	77.827	ENSMNEG00000034217	XRN1	92	77.953	Macaca_nemestrina
ENSOANG00000006735	XRN1	93	67.867	ENSMAMG00000013219	xrn1	85	76.644	Mastacembelus_armatus
ENSOANG00000006735	XRN1	99	57.512	ENSMZEG00005015099	xrn1	92	57.740	Maylandia_zebra
ENSOANG00000006735	XRN1	98	73.850	ENSMGAG00000006333	XRN1	92	73.283	Meleagris_gallopavo
ENSOANG00000006735	XRN1	100	77.617	ENSMICG00000048948	XRN1	92	77.680	Microcebus_murinus
ENSOANG00000006735	XRN1	53	86.290	ENSMOCG00000008665	Xrn1	85	86.290	Microtus_ochrogaster
ENSOANG00000006735	XRN1	100	80.000	ENSMODG00000021236	XRN1	92	80.126	Monodelphis_domestica
ENSOANG00000006735	XRN1	100	54.403	ENSMALG00000004098	xrn1	92	54.829	Monopterus_albus
ENSOANG00000006735	XRN1	100	68.727	MGP_CAROLIEiJ_G0032535	Xrn1	85	86.290	Mus_caroli
ENSOANG00000006735	XRN1	100	74.594	ENSMUSG00000032410	Xrn1	85	86.290	Mus_musculus
ENSOANG00000006735	XRN1	100	75.078	MGP_PahariEiJ_G0015404	Xrn1	85	86.061	Mus_pahari
ENSOANG00000006735	XRN1	100	74.469	MGP_SPRETEiJ_G0033678	Xrn1	85	86.290	Mus_spretus
ENSOANG00000006735	XRN1	100	77.511	ENSMPUG00000012040	XRN1	92	77.701	Mustela_putorius_furo
ENSOANG00000006735	XRN1	100	75.623	ENSMLUG00000016885	XRN1	92	75.623	Myotis_lucifugus
ENSOANG00000006735	XRN1	53	84.000	ENSNGAG00000023964	Xrn1	85	84.000	Nannospalax_galili
ENSOANG00000006735	XRN1	100	77.069	ENSNLEG00000004726	XRN1	92	77.448	Nomascus_leucogenys
ENSOANG00000006735	XRN1	75	95.575	ENSMEUG00000014473	-	71	95.575	Notamacropus_eugenii
ENSOANG00000006735	XRN1	77	71.224	ENSOPRG00000007337	-	71	73.265	Ochotona_princeps
ENSOANG00000006735	XRN1	100	58.451	ENSONIG00000016673	xrn1	90	61.918	Oreochromis_niloticus
ENSOANG00000006735	XRN1	100	75.679	ENSOCUG00000001861	XRN1	92	75.741	Oryctolagus_cuniculus
ENSOANG00000006735	XRN1	94	68.667	ENSORLG00000013005	xrn1	90	68.357	Oryzias_latipes
ENSOANG00000006735	XRN1	94	69.176	ENSORLG00020005559	xrn1	90	68.504	Oryzias_latipes_hni
ENSOANG00000006735	XRN1	94	67.591	ENSORLG00015022523	xrn1	89	68.999	Oryzias_latipes_hsok
ENSOANG00000006735	XRN1	93	69.982	ENSOMEG00000015397	xrn1	91	69.982	Oryzias_melastigma
ENSOANG00000006735	XRN1	100	75.032	ENSOGAG00000000170	XRN1	92	75.095	Otolemur_garnettii
ENSOANG00000006735	XRN1	99	77.609	ENSOARG00000006343	XRN1	92	77.672	Ovis_aries
ENSOANG00000006735	XRN1	100	77.701	ENSPPAG00000010180	XRN1	92	77.890	Pan_paniscus
ENSOANG00000006735	XRN1	100	77.098	ENSPPRG00000007125	XRN1	92	77.287	Panthera_pardus
ENSOANG00000006735	XRN1	100	77.098	ENSPTIG00000021081	XRN1	92	77.287	Panthera_tigris_altaica
ENSOANG00000006735	XRN1	100	77.701	ENSPTRG00000015482	XRN1	92	77.890	Pan_troglodytes
ENSOANG00000006735	XRN1	100	77.764	ENSPANG00000010638	XRN1	92	77.890	Papio_anubis
ENSOANG00000006735	XRN1	100	74.273	ENSPSIG00000018050	XRN1	92	73.827	Pelodiscus_sinensis
ENSOANG00000006735	XRN1	52	71.713	ENSPMGG00000002648	xrn1	84	74.648	Periophthalmus_magnuspinnatus
ENSOANG00000006735	XRN1	53	87.298	ENSPEMG00000020610	Xrn1	85	87.298	Peromyscus_maniculatus_bairdii
ENSOANG00000006735	XRN1	63	47.495	ENSPMAG00000002975	xrn1	90	45.818	Petromyzon_marinus
ENSOANG00000006735	XRN1	95	87.270	ENSPCIG00000028735	XRN1	92	87.621	Phascolarctos_cinereus
ENSOANG00000006735	XRN1	89	61.603	ENSPFOG00000013932	xrn1	90	61.882	Poecilia_formosa
ENSOANG00000006735	XRN1	90	60.589	ENSPLAG00000021653	xrn1	90	61.608	Poecilia_latipinna
ENSOANG00000006735	XRN1	88	60.994	ENSPMEG00000003076	xrn1	86	61.827	Poecilia_mexicana
ENSOANG00000006735	XRN1	93	66.667	ENSPREG00000021147	xrn1	89	66.375	Poecilia_reticulata
ENSOANG00000006735	XRN1	100	77.511	ENSPPYG00000014172	XRN1	92	77.637	Pongo_abelii
ENSOANG00000006735	XRN1	91	71.012	ENSPCAG00000005638	XRN1	85	79.111	Procavia_capensis
ENSOANG00000006735	XRN1	100	77.448	ENSPCOG00000013089	XRN1	87	87.776	Propithecus_coquereli
ENSOANG00000006735	XRN1	95	83.317	ENSPVAG00000016265	XRN1	88	83.317	Pteropus_vampyrus
ENSOANG00000006735	XRN1	93	68.486	ENSPNYG00000010570	xrn1	91	68.458	Pundamilia_nyererei
ENSOANG00000006735	XRN1	99	57.293	ENSPNAG00000023531	xrn1	88	66.753	Pygocentrus_nattereri
ENSOANG00000006735	XRN1	100	74.549	ENSRNOG00000042951	Xrn1	92	74.549	Rattus_norvegicus
ENSOANG00000006735	XRN1	100	77.701	ENSRBIG00000041227	XRN1	92	77.827	Rhinopithecus_bieti
ENSOANG00000006735	XRN1	65	51.724	YGL173C	XRN1	65	51.724	Saccharomyces_cerevisiae
ENSOANG00000006735	XRN1	100	77.448	ENSSBOG00000029561	XRN1	92	77.574	Saimiri_boliviensis_boliviensis
ENSOANG00000006735	XRN1	100	80.177	ENSSHAG00000016207	XRN1	93	80.177	Sarcophilus_harrisii
ENSOANG00000006735	XRN1	93	68.182	ENSSFOG00015024211	xrn1	90	68.268	Scleropages_formosus
ENSOANG00000006735	XRN1	97	64.996	ENSSMAG00000016534	xrn1	92	65.693	Scophthalmus_maximus
ENSOANG00000006735	XRN1	89	69.399	ENSSDUG00000010306	xrn1	88	69.364	Seriola_dumerili
ENSOANG00000006735	XRN1	99	64.874	ENSSLDG00000021543	xrn1	90	65.862	Seriola_lalandi_dorsalis
ENSOANG00000006735	XRN1	65	77.363	ENSSARG00000007741	-	73	77.363	Sorex_araneus
ENSOANG00000006735	XRN1	100	75.393	ENSTGUG00000008498	XRN1	92	74.953	Taeniopygia_guttata
ENSOANG00000006735	XRN1	91	66.112	ENSTRUG00000004895	xrn1	90	73.991	Takifugu_rubripes
ENSOANG00000006735	XRN1	96	64.763	ENSTNIG00000017615	xrn1	92	55.025	Tetraodon_nigroviridis
ENSOANG00000006735	XRN1	84	92.797	ENSTBEG00000003256	XRN1	80	77.846	Tupaia_belangeri
ENSOANG00000006735	XRN1	100	73.847	ENSTTRG00000012914	XRN1	92	73.910	Tursiops_truncatus
ENSOANG00000006735	XRN1	99	76.433	ENSUAMG00000001608	XRN1	92	84.753	Ursus_americanus
ENSOANG00000006735	XRN1	100	77.715	ENSUMAG00000013625	XRN1	92	77.904	Ursus_maritimus
ENSOANG00000006735	XRN1	100	74.226	ENSVPAG00000004690	XRN1	92	74.289	Vicugna_pacos
ENSOANG00000006735	XRN1	100	77.701	ENSVVUG00000024461	XRN1	92	88.506	Vulpes_vulpes
ENSOANG00000006735	XRN1	99	66.604	ENSXETG00000000619	xrn1	92	66.226	Xenopus_tropicalis
ENSOANG00000006735	XRN1	92	69.526	ENSXCOG00000007917	xrn1	88	69.526	Xiphophorus_couchianus
ENSOANG00000006735	XRN1	96	65.649	ENSXMAG00000018320	xrn1	89	69.708	Xiphophorus_maculatus