EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOANG00000007360 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: -
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Minus strand
Length: 197623 bases
Position: chrUltra396:102387-300009
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000011715	RRM_1	PF00076.22	5e-39	1	3
ENSOANP00000011715	RRM_1	PF00076.22	5e-39	2	3
ENSOANP00000011715	RRM_1	PF00076.22	5e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000011717	A1CF-201	1539	-	ENSOANP00000011715	464 (aa)	-	F6QNM0

Gene Model

Click here to download ENSOANG00000007360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000007360's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOANG00000007360	A1CF	69	51.070	ENSOANG00000003961	HNRNPR	64	50.599
ENSOANG00000007360	A1CF	77	61.622	ENSOANG00000002141	RBM46	75	61.622
ENSOANG00000007360	A1CF	94	59.819	ENSOANG00000008978	RBM47	72	59.819

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000007360	A1CF	99	90.196	ENSG00000148584	A1CF	100	95.522	Homo_sapiens
ENSOANG00000007360	A1CF	99	75.269	ENSAPOG00000008259	a1cf	79	75.269	Acanthochromis_polyacanthus
ENSOANG00000007360	A1CF	99	87.794	ENSAMEG00000000523	A1CF	78	87.794	Ailuropoda_melanoleuca
ENSOANG00000007360	A1CF	99	77.637	ENSACIG00000008632	a1cf	78	78.059	Amphilophus_citrinellus
ENSOANG00000007360	A1CF	99	76.533	ENSAOCG00000023744	a1cf	96	82.709	Amphiprion_ocellaris
ENSOANG00000007360	A1CF	99	75.052	ENSAPEG00000009537	a1cf	80	76.091	Amphiprion_percula
ENSOANG00000007360	A1CF	99	78.316	ENSATEG00000013720	a1cf	79	78.737	Anabas_testudineus
ENSOANG00000007360	A1CF	99	87.580	ENSAPLG00000002964	A1CF	79	87.580	Anas_platyrhynchos
ENSOANG00000007360	A1CF	99	84.532	ENSACAG00000015269	A1CF	79	84.532	Anolis_carolinensis
ENSOANG00000007360	A1CF	99	90.632	ENSANAG00000019974	A1CF	78	90.632	Aotus_nancymaae
ENSOANG00000007360	A1CF	99	75.949	ENSACLG00000017428	a1cf	81	77.215	Astatotilapia_calliptera
ENSOANG00000007360	A1CF	99	72.824	ENSAMXG00000018180	a1cf	77	72.824	Astyanax_mexicanus
ENSOANG00000007360	A1CF	99	90.196	ENSBTAG00000021195	A1CF	85	90.196	Bos_taurus
ENSOANG00000007360	A1CF	99	88.865	ENSCJAG00000005045	A1CF	78	88.865	Callithrix_jacchus
ENSOANG00000007360	A1CF	99	87.580	ENSCAFG00000015581	A1CF	79	87.580	Canis_familiaris
ENSOANG00000007360	A1CF	99	87.580	ENSCAFG00020026421	A1CF	98	90.635	Canis_lupus_dingo
ENSOANG00000007360	A1CF	99	87.794	ENSCHIG00000020411	A1CF	78	87.794	Capra_hircus
ENSOANG00000007360	A1CF	92	89.202	ENSTSYG00000001755	A1CF	77	89.202	Carlito_syrichta
ENSOANG00000007360	A1CF	96	80.675	ENSCAPG00000017386	A1CF	75	80.675	Cavia_aperea
ENSOANG00000007360	A1CF	99	89.507	ENSCPOG00000009807	A1CF	78	89.507	Cavia_porcellus
ENSOANG00000007360	A1CF	99	88.865	ENSCCAG00000018168	A1CF	78	88.865	Cebus_capucinus
ENSOANG00000007360	A1CF	99	90.196	ENSCATG00000043715	A1CF	81	89.588	Cercocebus_atys
ENSOANG00000007360	A1CF	99	87.821	ENSCLAG00000010424	A1CF	78	87.821	Chinchilla_lanigera
ENSOANG00000007360	A1CF	99	89.079	ENSCSAG00000007032	A1CF	78	89.079	Chlorocebus_sabaeus
ENSOANG00000007360	A1CF	96	85.398	ENSCHOG00000009089	A1CF	76	85.398	Choloepus_hoffmanni
ENSOANG00000007360	A1CF	99	89.079	ENSCPBG00000026464	A1CF	79	89.079	Chrysemys_picta_bellii
ENSOANG00000007360	A1CF	99	88.865	ENSCANG00000038032	A1CF	78	88.865	Colobus_angolensis_palliatus
ENSOANG00000007360	A1CF	99	87.580	ENSCGRG00001017413	A1cf	78	87.580	Cricetulus_griseus_chok1gshd
ENSOANG00000007360	A1CF	99	87.580	ENSCGRG00000017332	A1cf	78	87.580	Cricetulus_griseus_crigri
ENSOANG00000007360	A1CF	99	75.796	ENSCSEG00000002361	a1cf	78	76.221	Cynoglossus_semilaevis
ENSOANG00000007360	A1CF	99	77.474	ENSCVAG00000010520	a1cf	79	78.105	Cyprinodon_variegatus
ENSOANG00000007360	A1CF	99	81.466	ENSDARG00000002968	a1cf	79	81.681	Danio_rerio
ENSOANG00000007360	A1CF	99	88.437	ENSDNOG00000002829	A1CF	78	88.437	Dasypus_novemcinctus
ENSOANG00000007360	A1CF	77	90.580	ENSETEG00000012527	A1CF	60	90.580	Echinops_telfairi
ENSOANG00000007360	A1CF	99	88.651	ENSEASG00005012924	A1CF	78	88.651	Equus_asinus_asinus
ENSOANG00000007360	A1CF	99	88.437	ENSECAG00000010424	A1CF	78	88.437	Equus_caballus
ENSOANG00000007360	A1CF	79	83.607	ENSEEUG00000000013	A1CF	79	83.607	Erinaceus_europaeus
ENSOANG00000007360	A1CF	99	79.661	ENSELUG00000003159	a1cf	80	79.661	Esox_lucius
ENSOANG00000007360	A1CF	99	88.017	ENSFCAG00000011179	A1CF	78	88.017	Felis_catus
ENSOANG00000007360	A1CF	99	86.710	ENSFALG00000013183	A1CF	78	86.710	Ficedula_albicollis
ENSOANG00000007360	A1CF	99	90.196	ENSFDAG00000019371	A1CF	78	90.196	Fukomys_damarensis
ENSOANG00000007360	A1CF	99	71.368	ENSFHEG00000019652	a1cf	96	82.812	Fundulus_heteroclitus
ENSOANG00000007360	A1CF	99	71.008	ENSGMOG00000018943	a1cf	79	71.008	Gadus_morhua
ENSOANG00000007360	A1CF	92	86.697	ENSGALG00000003765	A1CF	75	86.697	Gallus_gallus
ENSOANG00000007360	A1CF	99	79.149	ENSGAFG00000014868	a1cf	83	79.149	Gambusia_affinis
ENSOANG00000007360	A1CF	99	73.222	ENSGACG00000010241	a1cf	78	73.849	Gasterosteus_aculeatus
ENSOANG00000007360	A1CF	92	88.940	ENSGAGG00000016508	A1CF	75	88.940	Gopherus_agassizii
ENSOANG00000007360	A1CF	99	88.651	ENSGGOG00000009670	A1CF	78	88.651	Gorilla_gorilla
ENSOANG00000007360	A1CF	99	76.371	ENSHBUG00000021959	a1cf	78	77.637	Haplochromis_burtoni
ENSOANG00000007360	A1CF	99	88.651	ENSHGLG00000008955	A1CF	78	88.651	Heterocephalus_glaber_female
ENSOANG00000007360	A1CF	99	87.794	ENSHGLG00100000518	A1CF	78	87.794	Heterocephalus_glaber_male
ENSOANG00000007360	A1CF	99	69.691	ENSHCOG00000017669	a1cf	79	71.753	Hippocampus_comes
ENSOANG00000007360	A1CF	99	80.297	ENSIPUG00000010367	a1cf	84	80.297	Ictalurus_punctatus
ENSOANG00000007360	A1CF	99	76.091	ENSKMAG00000006568	a1cf	78	77.131	Kryptolebias_marmoratus
ENSOANG00000007360	A1CF	99	74.743	ENSLBEG00000020994	a1cf	79	75.359	Labrus_bergylta
ENSOANG00000007360	A1CF	99	85.065	ENSLACG00000008061	A1CF	79	85.065	Latimeria_chalumnae
ENSOANG00000007360	A1CF	99	81.741	ENSLOCG00000006302	a1cf	79	81.741	Lepisosteus_oculatus
ENSOANG00000007360	A1CF	100	88.559	ENSLAFG00000015462	A1CF	79	88.559	Loxodonta_africana
ENSOANG00000007360	A1CF	99	90.632	ENSMFAG00000035948	A1CF	81	90.022	Macaca_fascicularis
ENSOANG00000007360	A1CF	99	90.632	ENSMMUG00000007077	A1CF	78	90.632	Macaca_mulatta
ENSOANG00000007360	A1CF	99	90.196	ENSMNEG00000031454	A1CF	82	88.651	Macaca_nemestrina
ENSOANG00000007360	A1CF	99	88.651	ENSMLEG00000037223	A1CF	81	89.588	Mandrillus_leucophaeus
ENSOANG00000007360	A1CF	99	75.372	ENSMAMG00000010402	a1cf	78	76.433	Mastacembelus_armatus
ENSOANG00000007360	A1CF	99	76.858	ENSMZEG00005013245	a1cf	79	76.858	Maylandia_zebra
ENSOANG00000007360	A1CF	99	86.752	ENSMGAG00000001507	A1CF	79	86.752	Meleagris_gallopavo
ENSOANG00000007360	A1CF	99	86.510	ENSMAUG00000007422	A1cf	78	86.510	Mesocricetus_auratus
ENSOANG00000007360	A1CF	99	89.760	ENSMICG00000003377	A1CF	77	89.760	Microcebus_murinus
ENSOANG00000007360	A1CF	99	87.152	ENSMOCG00000021536	A1cf	78	87.152	Microtus_ochrogaster
ENSOANG00000007360	A1CF	99	72.516	ENSMMOG00000009422	a1cf	80	73.784	Mola_mola
ENSOANG00000007360	A1CF	99	90.196	ENSMODG00000016478	A1CF	85	90.196	Monodelphis_domestica
ENSOANG00000007360	A1CF	86	83.871	ENSMALG00000012992	a1cf	73	83.871	Monopterus_albus
ENSOANG00000007360	A1CF	99	87.800	MGP_CAROLIEiJ_G0022873	A1cf	78	87.800	Mus_caroli
ENSOANG00000007360	A1CF	99	87.800	ENSMUSG00000052595	A1cf	99	90.339	Mus_musculus
ENSOANG00000007360	A1CF	99	87.146	MGP_PahariEiJ_G0014366	A1cf	78	87.146	Mus_pahari
ENSOANG00000007360	A1CF	99	87.582	MGP_SPRETEiJ_G0023792	A1cf	78	87.582	Mus_spretus
ENSOANG00000007360	A1CF	99	80.728	ENSMPUG00000016971	A1CF	78	80.728	Mustela_putorius_furo
ENSOANG00000007360	A1CF	99	88.009	ENSMLUG00000016071	A1CF	78	88.009	Myotis_lucifugus
ENSOANG00000007360	A1CF	99	88.651	ENSNGAG00000015136	A1cf	78	88.651	Nannospalax_galili
ENSOANG00000007360	A1CF	99	76.371	ENSNBRG00000001712	a1cf	78	77.637	Neolamprologus_brichardi
ENSOANG00000007360	A1CF	99	89.079	ENSNLEG00000012028	A1CF	78	89.079	Nomascus_leucogenys
ENSOANG00000007360	A1CF	92	90.610	ENSMEUG00000015909	A1CF	77	90.610	Notamacropus_eugenii
ENSOANG00000007360	A1CF	99	75.636	ENSOPRG00000010667	A1CF	86	75.636	Ochotona_princeps
ENSOANG00000007360	A1CF	99	77.426	ENSONIG00000019105	a1cf	78	77.637	Oreochromis_niloticus
ENSOANG00000007360	A1CF	99	89.760	ENSOCUG00000011587	A1CF	78	89.760	Oryctolagus_cuniculus
ENSOANG00000007360	A1CF	99	75.934	ENSORLG00000013342	a1cf	81	75.934	Oryzias_latipes
ENSOANG00000007360	A1CF	99	76.141	ENSORLG00020000586	a1cf	79	76.141	Oryzias_latipes_hni
ENSOANG00000007360	A1CF	99	76.141	ENSORLG00015018569	a1cf	79	76.141	Oryzias_latipes_hsok
ENSOANG00000007360	A1CF	99	77.542	ENSOMEG00000013531	a1cf	78	77.542	Oryzias_melastigma
ENSOANG00000007360	A1CF	99	88.009	ENSOGAG00000012884	A1CF	78	88.009	Otolemur_garnettii
ENSOANG00000007360	A1CF	99	87.794	ENSOARG00000013695	A1CF	78	87.794	Ovis_aries
ENSOANG00000007360	A1CF	99	88.651	ENSPPAG00000028115	A1CF	94	88.651	Pan_paniscus
ENSOANG00000007360	A1CF	99	86.938	ENSPPRG00000012180	A1CF	78	86.938	Panthera_pardus
ENSOANG00000007360	A1CF	99	86.938	ENSPTIG00000021223	A1CF	78	86.938	Panthera_tigris_altaica
ENSOANG00000007360	A1CF	99	90.414	ENSPTRG00000002508	A1CF	78	90.414	Pan_troglodytes
ENSOANG00000007360	A1CF	99	90.632	ENSPANG00000021988	A1CF	81	90.022	Papio_anubis
ENSOANG00000007360	A1CF	99	80.679	ENSPKIG00000025176	a1cf	79	80.679	Paramormyrops_kingsleyae
ENSOANG00000007360	A1CF	99	89.978	ENSPSIG00000010318	A1CF	79	89.978	Pelodiscus_sinensis
ENSOANG00000007360	A1CF	97	71.460	ENSPMGG00000013359	a1cf	78	72.444	Periophthalmus_magnuspinnatus
ENSOANG00000007360	A1CF	99	88.009	ENSPEMG00000015021	A1cf	78	88.009	Peromyscus_maniculatus_bairdii
ENSOANG00000007360	A1CF	99	91.285	ENSPCIG00000002175	A1CF	83	91.285	Phascolarctos_cinereus
ENSOANG00000007360	A1CF	99	76.605	ENSPFOG00000006683	a1cf	78	77.226	Poecilia_formosa
ENSOANG00000007360	A1CF	99	76.398	ENSPFOG00000007437	-	78	77.019	Poecilia_formosa
ENSOANG00000007360	A1CF	99	77.684	ENSPLAG00000000026	a1cf	78	78.316	Poecilia_latipinna
ENSOANG00000007360	A1CF	99	77.684	ENSPLAG00000001210	-	78	78.316	Poecilia_latipinna
ENSOANG00000007360	A1CF	94	71.269	ENSPMEG00000000921	a1cf	74	71.715	Poecilia_mexicana
ENSOANG00000007360	A1CF	94	70.022	ENSPMEG00000015529	-	74	70.460	Poecilia_mexicana
ENSOANG00000007360	A1CF	99	76.190	ENSPREG00000016298	a1cf	78	76.812	Poecilia_reticulata
ENSOANG00000007360	A1CF	99	90.850	ENSPPYG00000002819	A1CF	78	90.850	Pongo_abelii
ENSOANG00000007360	A1CF	74	74.269	ENSPCAG00000006463	A1CF	58	74.269	Procavia_capensis
ENSOANG00000007360	A1CF	99	88.437	ENSPCOG00000024172	A1CF	78	88.437	Propithecus_coquereli
ENSOANG00000007360	A1CF	99	75.104	ENSPNYG00000017944	a1cf	78	76.349	Pundamilia_nyererei
ENSOANG00000007360	A1CF	99	82.112	ENSPNAG00000007704	a1cf	78	82.112	Pygocentrus_nattereri
ENSOANG00000007360	A1CF	99	88.017	ENSRNOG00000033195	A1cf	78	88.017	Rattus_norvegicus
ENSOANG00000007360	A1CF	97	83.080	ENSRBIG00000042892	A1CF	74	88.267	Rhinopithecus_bieti
ENSOANG00000007360	A1CF	99	89.079	ENSRROG00000041398	A1CF	78	89.079	Rhinopithecus_roxellana
ENSOANG00000007360	A1CF	99	89.079	ENSSBOG00000021930	A1CF	78	89.079	Saimiri_boliviensis_boliviensis
ENSOANG00000007360	A1CF	99	89.542	ENSSHAG00000005096	A1CF	78	89.542	Sarcophilus_harrisii
ENSOANG00000007360	A1CF	99	81.425	ENSSFOG00015011774	a1cf	87	81.425	Scleropages_formosus
ENSOANG00000007360	A1CF	99	74.534	ENSSMAG00000013271	a1cf	78	74.948	Scophthalmus_maximus
ENSOANG00000007360	A1CF	99	76.533	ENSSDUG00000013930	a1cf	78	76.533	Seriola_dumerili
ENSOANG00000007360	A1CF	83	82.519	ENSSLDG00000004290	a1cf	68	82.519	Seriola_lalandi_dorsalis
ENSOANG00000007360	A1CF	93	76.977	ENSSARG00000005940	A1CF	73	76.977	Sorex_araneus
ENSOANG00000007360	A1CF	93	87.927	ENSSPUG00000006797	A1CF	74	87.927	Sphenodon_punctatus
ENSOANG00000007360	A1CF	99	89.293	ENSSSCG00000010431	A1CF	78	89.293	Sus_scrofa
ENSOANG00000007360	A1CF	99	85.439	ENSTGUG00000005090	A1CF	78	85.439	Taeniopygia_guttata
ENSOANG00000007360	A1CF	93	77.111	ENSTRUG00000001982	a1cf	78	73.859	Takifugu_rubripes
ENSOANG00000007360	A1CF	99	74.587	ENSTNIG00000003580	a1cf	78	74.587	Tetraodon_nigroviridis
ENSOANG00000007360	A1CF	95	81.859	ENSTTRG00000013190	A1CF	73	81.859	Tursiops_truncatus
ENSOANG00000007360	A1CF	99	89.107	ENSUAMG00000020065	A1CF	78	89.107	Ursus_americanus
ENSOANG00000007360	A1CF	99	87.366	ENSUMAG00000011162	A1CF	79	87.366	Ursus_maritimus
ENSOANG00000007360	A1CF	82	89.239	ENSVPAG00000006130	A1CF	64	89.239	Vicugna_pacos
ENSOANG00000007360	A1CF	99	89.107	ENSVVUG00000002504	A1CF	85	89.107	Vulpes_vulpes
ENSOANG00000007360	A1CF	99	75.584	ENSXETG00000006611	a1cf	79	75.584	Xenopus_tropicalis
ENSOANG00000007360	A1CF	99	79.193	ENSXCOG00000003302	a1cf	78	79.193	Xiphophorus_couchianus
ENSOANG00000007360	A1CF	99	77.871	ENSXMAG00000016703	a1cf	78	77.871	Xiphophorus_maculatus