EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOANG00000007529 (Gene tree)
Gene ID: -
Gene Symbol: CMSS1
Alias: -
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Minus strand
Length: 16749 bases
Position: chrContig14:3365349-3382097
Accession: 28666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000011993	CMS1	PF14617.6	2.4e-31	1	1
ENSOANP00000011992	CMS1	PF14617.6	5.4e-31	1	1
ENSOANP00000011992	DEAD	PF00270.29	4.8e-08	1	1
ENSOANP00000011993	DEAD	PF00270.29	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000011994	CMSS1-202	779	-	ENSOANP00000011992	258 (aa)	-	F7CHA2
ENSOANT00000011995	CMSS1-201	904	-	ENSOANP00000011993	233 (aa)	-	F7CH94

Gene Model

Click here to download ENSOANG00000007529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000007529's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000007529	CMSS1	100	73.391	ENSG00000184220	CMSS1	99	75.309	Homo_sapiens
ENSOANG00000007529	CMSS1	87	62.376	ENSAPOG00000010604	cmss1	100	55.952	Acanthochromis_polyacanthus
ENSOANG00000007529	CMSS1	100	74.359	ENSAMEG00000004092	CMSS1	99	71.648	Ailuropoda_melanoleuca
ENSOANG00000007529	CMSS1	87	55.446	ENSACIG00000021854	cmss1	82	53.425	Amphilophus_citrinellus
ENSOANG00000007529	CMSS1	87	61.386	ENSAOCG00000013361	cmss1	76	59.817	Amphiprion_ocellaris
ENSOANG00000007529	CMSS1	87	61.386	ENSAPEG00000005829	cmss1	76	59.817	Amphiprion_percula
ENSOANG00000007529	CMSS1	88	62.136	ENSATEG00000008209	cmss1	97	53.532	Anabas_testudineus
ENSOANG00000007529	CMSS1	100	74.249	ENSAPLG00000010542	CMSS1	100	75.652	Anas_platyrhynchos
ENSOANG00000007529	CMSS1	100	72.532	ENSACAG00000011065	CMSS1	97	68.679	Anolis_carolinensis
ENSOANG00000007529	CMSS1	100	73.391	ENSANAG00000023565	CMSS1	98	71.154	Aotus_nancymaae
ENSOANG00000007529	CMSS1	87	61.881	ENSACLG00000027294	cmss1	75	60.274	Astatotilapia_calliptera
ENSOANG00000007529	CMSS1	99	53.478	ENSAMXG00000002046	cmss1	83	51.837	Astyanax_mexicanus
ENSOANG00000007529	CMSS1	99	73.276	ENSBTAG00000013663	CMSS1	93	68.992	Bos_taurus
ENSOANG00000007529	CMSS1	100	72.961	ENSCJAG00000000610	CMSS1	98	71.154	Callithrix_jacchus
ENSOANG00000007529	CMSS1	100	74.249	ENSCAFG00000009230	CMSS1	93	72.308	Canis_familiaris
ENSOANG00000007529	CMSS1	94	70.909	ENSCAFG00020024156	-	69	70.909	Canis_lupus_dingo
ENSOANG00000007529	CMSS1	100	74.249	ENSCAFG00020009464	-	93	72.308	Canis_lupus_dingo
ENSOANG00000007529	CMSS1	99	73.707	ENSCHIG00000013003	CMSS1	93	70.000	Capra_hircus
ENSOANG00000007529	CMSS1	100	73.820	ENSTSYG00000009266	CMSS1	99	69.767	Carlito_syrichta
ENSOANG00000007529	CMSS1	97	59.471	ENSCAPG00000013584	CMSS1	100	59.641	Cavia_aperea
ENSOANG00000007529	CMSS1	100	75.107	ENSCPOG00000014680	CMSS1	92	71.154	Cavia_porcellus
ENSOANG00000007529	CMSS1	100	74.249	ENSCCAG00000034685	CMSS1	98	72.308	Cebus_capucinus
ENSOANG00000007529	CMSS1	100	74.678	ENSCATG00000031980	CMSS1	98	73.077	Cercocebus_atys
ENSOANG00000007529	CMSS1	100	74.678	ENSCLAG00000011241	CMSS1	98	76.419	Chinchilla_lanigera
ENSOANG00000007529	CMSS1	100	74.678	ENSCSAG00000006024	CMSS1	100	74.694	Chlorocebus_sabaeus
ENSOANG00000007529	CMSS1	100	54.506	ENSCHOG00000012098	CMSS1	93	54.231	Choloepus_hoffmanni
ENSOANG00000007529	CMSS1	85	43.216	ENSCING00000014848	-	99	44.385	Ciona_intestinalis
ENSOANG00000007529	CMSS1	54	45.238	ENSCSAVG00000002309	-	99	45.238	Ciona_savignyi
ENSOANG00000007529	CMSS1	100	74.249	ENSCANG00000031337	CMSS1	98	72.692	Colobus_angolensis_palliatus
ENSOANG00000007529	CMSS1	100	73.820	ENSCGRG00001014305	Cmss1	91	70.866	Cricetulus_griseus_chok1gshd
ENSOANG00000007529	CMSS1	100	74.249	ENSCGRG00000006722	Cmss1	99	71.094	Cricetulus_griseus_crigri
ENSOANG00000007529	CMSS1	87	62.871	ENSCSEG00000004958	cmss1	78	59.130	Cynoglossus_semilaevis
ENSOANG00000007529	CMSS1	87	61.881	ENSCVAG00000005039	cmss1	77	60.360	Cyprinodon_variegatus
ENSOANG00000007529	CMSS1	99	51.948	ENSDARG00000112579	cmss1	79	54.310	Danio_rerio
ENSOANG00000007529	CMSS1	100	73.391	ENSDNOG00000040418	CMSS1	91	71.595	Dasypus_novemcinctus
ENSOANG00000007529	CMSS1	100	73.820	ENSDORG00000010461	Cmss1	91	70.751	Dipodomys_ordii
ENSOANG00000007529	CMSS1	57	51.515	ENSEBUG00000002156	-	96	51.515	Eptatretus_burgeri
ENSOANG00000007529	CMSS1	100	72.103	ENSEASG00005010966	CMSS1	99	72.603	Equus_asinus_asinus
ENSOANG00000007529	CMSS1	100	72.103	ENSECAG00000015662	CMSS1	99	72.566	Equus_caballus
ENSOANG00000007529	CMSS1	99	51.293	ENSEEUG00000007624	-	82	54.148	Erinaceus_europaeus
ENSOANG00000007529	CMSS1	87	62.376	ENSELUG00000019459	cmss1	77	58.874	Esox_lucius
ENSOANG00000007529	CMSS1	100	74.678	ENSFCAG00000044577	CMSS1	92	72.308	Felis_catus
ENSOANG00000007529	CMSS1	100	72.103	ENSFALG00000005816	CMSS1	97	73.362	Ficedula_albicollis
ENSOANG00000007529	CMSS1	99	73.276	ENSFDAG00000012577	CMSS1	100	73.684	Fukomys_damarensis
ENSOANG00000007529	CMSS1	99	58.009	ENSFHEG00000012008	cmss1	95	59.740	Fundulus_heteroclitus
ENSOANG00000007529	CMSS1	87	60.891	ENSGMOG00000016729	cmss1	96	52.747	Gadus_morhua
ENSOANG00000007529	CMSS1	100	75.107	ENSGALG00000015267	CMSS1	99	71.042	Gallus_gallus
ENSOANG00000007529	CMSS1	91	61.611	ENSGAFG00000021217	cmss1	100	52.273	Gambusia_affinis
ENSOANG00000007529	CMSS1	87	56.931	ENSGACG00000002798	cmss1	96	50.187	Gasterosteus_aculeatus
ENSOANG00000007529	CMSS1	100	74.678	ENSGAGG00000019861	CMSS1	98	69.847	Gopherus_agassizii
ENSOANG00000007529	CMSS1	100	74.249	ENSGGOG00000014125	CMSS1	98	72.308	Gorilla_gorilla
ENSOANG00000007529	CMSS1	97	59.031	ENSHBUG00000008431	cmss1	80	59.031	Haplochromis_burtoni
ENSOANG00000007529	CMSS1	99	74.459	ENSHGLG00000019481	CMSS1	100	70.800	Heterocephalus_glaber_female
ENSOANG00000007529	CMSS1	99	74.459	ENSHGLG00100010314	CMSS1	99	70.817	Heterocephalus_glaber_male
ENSOANG00000007529	CMSS1	98	60.526	ENSHCOG00000003222	cmss1	85	55.777	Hippocampus_comes
ENSOANG00000007529	CMSS1	97	56.444	ENSIPUG00000011591	cmss1	76	57.014	Ictalurus_punctatus
ENSOANG00000007529	CMSS1	100	73.391	ENSSTOG00000019366	CMSS1	92	70.769	Ictidomys_tridecemlineatus
ENSOANG00000007529	CMSS1	100	73.820	ENSJJAG00000014894	Cmss1	91	76.961	Jaculus_jaculus
ENSOANG00000007529	CMSS1	87	55.941	ENSKMAG00000002390	cmss1	84	55.288	Kryptolebias_marmoratus
ENSOANG00000007529	CMSS1	87	59.606	ENSLBEG00000006298	cmss1	90	57.727	Labrus_bergylta
ENSOANG00000007529	CMSS1	99	68.103	ENSLACG00000009293	CMSS1	100	68.261	Latimeria_chalumnae
ENSOANG00000007529	CMSS1	99	56.957	ENSLOCG00000009391	cmss1	84	55.833	Lepisosteus_oculatus
ENSOANG00000007529	CMSS1	99	75.862	ENSLAFG00000017509	CMSS1	100	76.754	Loxodonta_africana
ENSOANG00000007529	CMSS1	100	74.249	ENSMFAG00000045006	CMSS1	98	72.692	Macaca_fascicularis
ENSOANG00000007529	CMSS1	100	73.820	ENSMMUG00000002939	CMSS1	98	75.455	Macaca_mulatta
ENSOANG00000007529	CMSS1	100	74.249	ENSMNEG00000031315	CMSS1	98	72.692	Macaca_nemestrina
ENSOANG00000007529	CMSS1	100	74.249	ENSMLEG00000033660	CMSS1	98	72.692	Mandrillus_leucophaeus
ENSOANG00000007529	CMSS1	87	62.376	ENSMAMG00000017176	cmss1	76	59.729	Mastacembelus_armatus
ENSOANG00000007529	CMSS1	87	61.881	ENSMZEG00005021886	cmss1	75	60.274	Maylandia_zebra
ENSOANG00000007529	CMSS1	99	75.000	ENSMGAG00000014360	CMSS1	100	76.316	Meleagris_gallopavo
ENSOANG00000007529	CMSS1	100	51.055	ENSMAUG00000020609	Cmss1	90	50.385	Mesocricetus_auratus
ENSOANG00000007529	CMSS1	100	73.391	ENSMICG00000048977	CMSS1	99	70.817	Microcebus_murinus
ENSOANG00000007529	CMSS1	100	73.820	ENSMOCG00000021937	Cmss1	91	70.751	Microtus_ochrogaster
ENSOANG00000007529	CMSS1	87	59.901	ENSMMOG00000019794	cmss1	92	57.014	Mola_mola
ENSOANG00000007529	CMSS1	100	78.112	ENSMODG00000002275	CMSS1	97	76.265	Monodelphis_domestica
ENSOANG00000007529	CMSS1	87	64.356	ENSMALG00000004250	cmss1	76	61.538	Monopterus_albus
ENSOANG00000007529	CMSS1	100	74.043	MGP_CAROLIEiJ_G0020824	Cmss1	92	71.260	Mus_caroli
ENSOANG00000007529	CMSS1	100	75.319	ENSMUSG00000022748	Cmss1	92	72.441	Mus_musculus
ENSOANG00000007529	CMSS1	100	75.536	MGP_PahariEiJ_G0016524	Cmss1	92	71.429	Mus_pahari
ENSOANG00000007529	CMSS1	100	75.319	MGP_SPRETEiJ_G0021724	Cmss1	92	72.441	Mus_spretus
ENSOANG00000007529	CMSS1	99	75.431	ENSMPUG00000011324	CMSS1	98	71.429	Mustela_putorius_furo
ENSOANG00000007529	CMSS1	100	72.766	ENSMLUG00000001131	CMSS1	98	70.611	Myotis_lucifugus
ENSOANG00000007529	CMSS1	100	74.678	ENSNGAG00000020316	Cmss1	92	71.538	Nannospalax_galili
ENSOANG00000007529	CMSS1	87	61.881	ENSNBRG00000003095	cmss1	75	60.274	Neolamprologus_brichardi
ENSOANG00000007529	CMSS1	100	74.678	ENSNLEG00000034172	CMSS1	98	72.692	Nomascus_leucogenys
ENSOANG00000007529	CMSS1	99	66.810	ENSMEUG00000014505	CMSS1	100	67.982	Notamacropus_eugenii
ENSOANG00000007529	CMSS1	100	74.678	ENSOPRG00000002986	CMSS1	91	72.727	Ochotona_princeps
ENSOANG00000007529	CMSS1	97	62.389	ENSODEG00000009446	-	97	58.468	Octodon_degus
ENSOANG00000007529	CMSS1	100	63.519	ENSODEG00000001853	-	92	60.769	Octodon_degus
ENSOANG00000007529	CMSS1	99	71.983	ENSODEG00000003558	-	88	69.874	Octodon_degus
ENSOANG00000007529	CMSS1	100	74.249	ENSODEG00000005226	-	92	70.385	Octodon_degus
ENSOANG00000007529	CMSS1	87	61.386	ENSONIG00000006678	cmss1	84	59.817	Oreochromis_niloticus
ENSOANG00000007529	CMSS1	100	73.820	ENSOCUG00000025366	CMSS1	93	71.154	Oryctolagus_cuniculus
ENSOANG00000007529	CMSS1	87	62.871	ENSORLG00000020340	cmss1	80	58.650	Oryzias_latipes
ENSOANG00000007529	CMSS1	89	57.488	ENSORLG00020012235	cmss1	99	52.083	Oryzias_latipes_hni
ENSOANG00000007529	CMSS1	87	57.426	ENSORLG00015015551	cmss1	78	56.459	Oryzias_latipes_hsok
ENSOANG00000007529	CMSS1	87	63.366	ENSOMEG00000012555	cmss1	79	60.526	Oryzias_melastigma
ENSOANG00000007529	CMSS1	99	72.414	ENSOGAG00000002045	CMSS1	100	74.123	Otolemur_garnettii
ENSOANG00000007529	CMSS1	99	73.820	ENSOARG00000017899	CMSS1	88	70.115	Ovis_aries
ENSOANG00000007529	CMSS1	100	74.249	ENSPPAG00000038515	CMSS1	94	72.692	Pan_paniscus
ENSOANG00000007529	CMSS1	100	74.678	ENSPPRG00000016767	CMSS1	92	71.923	Panthera_pardus
ENSOANG00000007529	CMSS1	100	74.249	ENSPTIG00000018274	CMSS1	92	72.137	Panthera_tigris_altaica
ENSOANG00000007529	CMSS1	100	73.820	ENSPTRG00000015157	CMSS1	100	73.279	Pan_troglodytes
ENSOANG00000007529	CMSS1	99	74.569	ENSPANG00000019980	CMSS1	98	72.374	Papio_anubis
ENSOANG00000007529	CMSS1	99	62.174	ENSPKIG00000012609	cmss1	86	63.404	Paramormyrops_kingsleyae
ENSOANG00000007529	CMSS1	100	79.399	ENSPSIG00000003849	CMSS1	100	80.786	Pelodiscus_sinensis
ENSOANG00000007529	CMSS1	97	59.292	ENSPMGG00000010286	cmss1	97	59.292	Periophthalmus_magnuspinnatus
ENSOANG00000007529	CMSS1	100	73.820	ENSPEMG00000016384	Cmss1	91	69.231	Peromyscus_maniculatus_bairdii
ENSOANG00000007529	CMSS1	88	57.843	ENSPMAG00000001146	cmss1	100	57.843	Petromyzon_marinus
ENSOANG00000007529	CMSS1	100	79.828	ENSPCIG00000015656	CMSS1	98	77.308	Phascolarctos_cinereus
ENSOANG00000007529	CMSS1	87	60.891	ENSPFOG00000016849	cmss1	95	52.206	Poecilia_formosa
ENSOANG00000007529	CMSS1	87	60.396	ENSPLAG00000008323	cmss1	95	51.838	Poecilia_latipinna
ENSOANG00000007529	CMSS1	87	60.891	ENSPMEG00000021020	cmss1	94	52.206	Poecilia_mexicana
ENSOANG00000007529	CMSS1	99	56.652	ENSPREG00000007618	cmss1	93	52.555	Poecilia_reticulata
ENSOANG00000007529	CMSS1	100	74.678	ENSPPYG00000013606	CMSS1	94	73.077	Pongo_abelii
ENSOANG00000007529	CMSS1	100	73.391	ENSPCOG00000020035	CMSS1	99	70.428	Propithecus_coquereli
ENSOANG00000007529	CMSS1	100	62.661	ENSPVAG00000017031	CMSS1	92	61.154	Pteropus_vampyrus
ENSOANG00000007529	CMSS1	76	64.773	ENSPNYG00000013428	cmss1	71	62.694	Pundamilia_nyererei
ENSOANG00000007529	CMSS1	99	57.576	ENSPNAG00000007912	cmss1	87	53.725	Pygocentrus_nattereri
ENSOANG00000007529	CMSS1	100	74.249	ENSRNOG00000027888	Cmss1	100	70.543	Rattus_norvegicus
ENSOANG00000007529	CMSS1	100	74.249	ENSRBIG00000037931	CMSS1	98	72.692	Rhinopithecus_bieti
ENSOANG00000007529	CMSS1	100	74.249	ENSRROG00000042910	CMSS1	98	72.692	Rhinopithecus_roxellana
ENSOANG00000007529	CMSS1	100	73.391	ENSSBOG00000030980	CMSS1	98	71.538	Saimiri_boliviensis_boliviensis
ENSOANG00000007529	CMSS1	100	78.541	ENSSHAG00000009321	CMSS1	99	77.381	Sarcophilus_harrisii
ENSOANG00000007529	CMSS1	99	62.609	ENSSFOG00015001509	cmss1	81	63.136	Scleropages_formosus
ENSOANG00000007529	CMSS1	87	62.871	ENSSMAG00000001653	cmss1	80	59.244	Scophthalmus_maximus
ENSOANG00000007529	CMSS1	87	62.871	ENSSDUG00000007719	cmss1	80	59.389	Seriola_dumerili
ENSOANG00000007529	CMSS1	89	63.462	ENSSLDG00000012300	cmss1	75	58.889	Seriola_lalandi_dorsalis
ENSOANG00000007529	CMSS1	100	61.373	ENSSARG00000003584	CMSS1	91	61.004	Sorex_araneus
ENSOANG00000007529	CMSS1	99	76.957	ENSSPUG00000003865	CMSS1	100	78.319	Sphenodon_punctatus
ENSOANG00000007529	CMSS1	89	62.981	ENSSPAG00000019182	cmss1	81	53.759	Stegastes_partitus
ENSOANG00000007529	CMSS1	100	74.249	ENSSSCG00000011970	CMSS1	92	71.923	Sus_scrofa
ENSOANG00000007529	CMSS1	100	72.103	ENSTGUG00000013635	CMSS1	100	72.926	Taeniopygia_guttata
ENSOANG00000007529	CMSS1	87	62.376	ENSTRUG00000015265	cmss1	96	52.222	Takifugu_rubripes
ENSOANG00000007529	CMSS1	87	57.921	ENSTNIG00000002880	cmss1	86	53.782	Tetraodon_nigroviridis
ENSOANG00000007529	CMSS1	99	53.017	ENSTBEG00000016722	CMSS1	81	53.509	Tupaia_belangeri
ENSOANG00000007529	CMSS1	100	72.103	ENSTTRG00000001562	CMSS1	92	68.077	Tursiops_truncatus
ENSOANG00000007529	CMSS1	100	75.536	ENSUAMG00000024209	CMSS1	100	76.682	Ursus_americanus
ENSOANG00000007529	CMSS1	100	75.107	ENSUMAG00000001983	CMSS1	99	72.308	Ursus_maritimus
ENSOANG00000007529	CMSS1	99	59.914	ENSVPAG00000000263	CMSS1	82	60.965	Vicugna_pacos
ENSOANG00000007529	CMSS1	100	74.678	ENSVVUG00000021647	-	100	73.577	Vulpes_vulpes
ENSOANG00000007529	CMSS1	94	74.545	ENSVVUG00000007776	-	87	74.545	Vulpes_vulpes
ENSOANG00000007529	CMSS1	87	68.317	ENSXETG00000011858	cmss1	83	65.086	Xenopus_tropicalis
ENSOANG00000007529	CMSS1	89	62.319	ENSXCOG00000018724	cmss1	71	61.538	Xiphophorus_couchianus
ENSOANG00000007529	CMSS1	89	62.319	ENSXMAG00000011243	cmss1	78	61.538	Xiphophorus_maculatus