EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOANG00000007627 (Gene tree)
Gene ID
100078443
Gene Symbol
SF3B6
Alias
-
Full Name
splicing factor 3b subunit 6
Gene Type
protein_coding
Species
Ornithorhynchus_anatinus
Status
putative
Strand
Plus strand
Length
7921 bases
Position
chr2:6054244-6062164
Accession
30096
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOANP00000012157RRM_1PF00076.222e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOANT00000012159SF3B6-2012159-ENSOANP00000012157125 (aa)XP_007654034F7C1W1
Gene Model
Click here to download ENSOANG00000007627's gene model file
Pathways
Pathway IDPathway NameSource
oaa03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000007627's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOANG00000007627SF3B66233.735ENSOANG00000002695-6933.735
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOANG00000007627SF3B6100100.000ENSG00000115128SF3B6100100.000Homo_sapiens
ENSOANG00000007627SF3B610098.400ENSAPOG00000023788sf3b610098.400Acanthochromis_polyacanthus
ENSOANG00000007627SF3B6100100.000ENSAMEG00000002786SF3B6100100.000Ailuropoda_melanoleuca
ENSOANG00000007627SF3B610098.400ENSACIG00000012608sf3b610098.400Amphilophus_citrinellus
ENSOANG00000007627SF3B610098.400ENSAOCG00000013394sf3b610098.400Amphiprion_ocellaris
ENSOANG00000007627SF3B610098.400ENSAPEG00000015311sf3b610098.400Amphiprion_percula
ENSOANG00000007627SF3B610098.400ENSATEG00000016569sf3b610098.400Anabas_testudineus
ENSOANG00000007627SF3B6100100.000ENSACAG00000011677SF3B6100100.000Anolis_carolinensis
ENSOANG00000007627SF3B6100100.000ENSANAG00000027284SF3B695100.000Aotus_nancymaae
ENSOANG00000007627SF3B610098.400ENSACLG00000007793sf3b610098.400Astatotilapia_calliptera
ENSOANG00000007627SF3B6100100.000ENSAMXG00000034888sf3b6100100.000Astyanax_mexicanus
ENSOANG00000007627SF3B6100100.000ENSBTAG00000003407SF3B6100100.000Bos_taurus
ENSOANG00000007627SF3B610098.400ENSBTAG00000049128-10098.400Bos_taurus
ENSOANG00000007627SF3B610068.000WBGene00016808C50D2.59168.000Caenorhabditis_elegans
ENSOANG00000007627SF3B6100100.000ENSCJAG00000007716SF3B6100100.000Callithrix_jacchus
ENSOANG00000007627SF3B6100100.000ENSCAFG00000003957SF3B6100100.000Canis_familiaris
ENSOANG00000007627SF3B6100100.000ENSCAFG00020025576SF3B6100100.000Canis_lupus_dingo
ENSOANG00000007627SF3B6100100.000ENSCHIG00000009902SF3B6100100.000Capra_hircus
ENSOANG00000007627SF3B6100100.000ENSTSYG00000013978SF3B6100100.000Carlito_syrichta
ENSOANG00000007627SF3B69796.694ENSCAPG00000016302SF3B69996.694Cavia_aperea
ENSOANG00000007627SF3B6100100.000ENSCPOG00000008016SF3B6100100.000Cavia_porcellus
ENSOANG00000007627SF3B6100100.000ENSCCAG00000036653SF3B6100100.000Cebus_capucinus
ENSOANG00000007627SF3B69994.355ENSCCAG00000018894-9694.355Cebus_capucinus
ENSOANG00000007627SF3B6100100.000ENSCATG00000030936SF3B6100100.000Cercocebus_atys
ENSOANG00000007627SF3B6100100.000ENSCLAG00000014512SF3B6100100.000Chinchilla_lanigera
ENSOANG00000007627SF3B6100100.000ENSCSAG00000008390SF3B6100100.000Chlorocebus_sabaeus
ENSOANG00000007627SF3B6100100.000ENSCHOG00000000689SF3B6100100.000Choloepus_hoffmanni
ENSOANG00000007627SF3B69974.194ENSCHOG00000013886-9974.194Choloepus_hoffmanni
ENSOANG00000007627SF3B6100100.000ENSCPBG00000020042SF3B6100100.000Chrysemys_picta_bellii
ENSOANG00000007627SF3B69880.488ENSCING00000012689-9780.488Ciona_intestinalis
ENSOANG00000007627SF3B6100100.000ENSCANG00000030559SF3B6100100.000Colobus_angolensis_palliatus
ENSOANG00000007627SF3B6100100.000ENSCGRG00001014595Sf3b6100100.000Cricetulus_griseus_chok1gshd
ENSOANG00000007627SF3B6100100.000ENSCGRG00000005272Sf3b6100100.000Cricetulus_griseus_crigri
ENSOANG00000007627SF3B610097.600ENSCSEG00000019017sf3b610097.600Cynoglossus_semilaevis
ENSOANG00000007627SF3B610099.200ENSCVAG00000005055sf3b610099.200Cyprinodon_variegatus
ENSOANG00000007627SF3B6100100.000ENSDARG00000009753sf3b6100100.000Danio_rerio
ENSOANG00000007627SF3B6100100.000ENSDNOG00000007148SF3B6100100.000Dasypus_novemcinctus
ENSOANG00000007627SF3B69982.540ENSDORG00000027390-9882.540Dipodomys_ordii
ENSOANG00000007627SF3B69982.540ENSDORG00000029761-9882.540Dipodomys_ordii
ENSOANG00000007627SF3B6100100.000ENSDORG00000009772Sf3b6100100.000Dipodomys_ordii
ENSOANG00000007627SF3B69277.391FBgn0035692Sf3b69577.391Drosophila_melanogaster
ENSOANG00000007627SF3B69292.174ENSEBUG00000004424sf3b69192.174Eptatretus_burgeri
ENSOANG00000007627SF3B6100100.000ENSEASG00005009993SF3B6100100.000Equus_asinus_asinus
ENSOANG00000007627SF3B610088.800ENSEASG00005008061-10088.800Equus_asinus_asinus
ENSOANG00000007627SF3B67986.869ENSECAG00000027755-8586.869Equus_caballus
ENSOANG00000007627SF3B68196.040ENSECAG00000015618SF3B69396.040Equus_caballus
ENSOANG00000007627SF3B610098.400ENSELUG00000010379sf3b610098.400Esox_lucius
ENSOANG00000007627SF3B6100100.000ENSFCAG00000031365SF3B6100100.000Felis_catus
ENSOANG00000007627SF3B6100100.000ENSFALG00000001651SF3B6100100.000Ficedula_albicollis
ENSOANG00000007627SF3B6100100.000ENSFDAG00000007864SF3B6100100.000Fukomys_damarensis
ENSOANG00000007627SF3B610099.200ENSFHEG00000000685sf3b610099.200Fundulus_heteroclitus
ENSOANG00000007627SF3B610097.600ENSGMOG00000005123sf3b610097.600Gadus_morhua
ENSOANG00000007627SF3B673100.000ENSGALG00000016501SF3B6100100.000Gallus_gallus
ENSOANG00000007627SF3B610098.400ENSGAFG00000009334sf3b610098.400Gambusia_affinis
ENSOANG00000007627SF3B610097.600ENSGACG00000004803sf3b610097.600Gasterosteus_aculeatus
ENSOANG00000007627SF3B6100100.000ENSGAGG00000012240SF3B6100100.000Gopherus_agassizii
ENSOANG00000007627SF3B6100100.000ENSGGOG00000040806SF3B6100100.000Gorilla_gorilla
ENSOANG00000007627SF3B610098.400ENSHBUG00000012556sf3b610098.400Haplochromis_burtoni
ENSOANG00000007627SF3B6100100.000ENSHGLG00000014895SF3B14100100.000Heterocephalus_glaber_female
ENSOANG00000007627SF3B6100100.000ENSHGLG00100008639SF3B14100100.000Heterocephalus_glaber_male
ENSOANG00000007627SF3B610099.200ENSHCOG00000019962sf3b610099.200Hippocampus_comes
ENSOANG00000007627SF3B6100100.000ENSIPUG00000023800sf3b6100100.000Ictalurus_punctatus
ENSOANG00000007627SF3B6100100.000ENSJJAG00000021819Sf3b6100100.000Jaculus_jaculus
ENSOANG00000007627SF3B610098.400ENSKMAG00000004000sf3b610098.400Kryptolebias_marmoratus
ENSOANG00000007627SF3B610098.400ENSLBEG00000022937sf3b610098.400Labrus_bergylta
ENSOANG00000007627SF3B6100100.000ENSLACG00000014326SF3B6100100.000Latimeria_chalumnae
ENSOANG00000007627SF3B6100100.000ENSLOCG00000016481sf3b6100100.000Lepisosteus_oculatus
ENSOANG00000007627SF3B6100100.000ENSLAFG00000029423SF3B6100100.000Loxodonta_africana
ENSOANG00000007627SF3B6100100.000ENSMFAG00000038178SF3B6100100.000Macaca_fascicularis
ENSOANG00000007627SF3B6100100.000ENSMMUG00000001282SF3B6100100.000Macaca_mulatta
ENSOANG00000007627SF3B6100100.000ENSMNEG00000029050SF3B6100100.000Macaca_nemestrina
ENSOANG00000007627SF3B6100100.000ENSMLEG00000019896SF3B6100100.000Mandrillus_leucophaeus
ENSOANG00000007627SF3B67896.907ENSMAMG00000007713sf3b68896.907Mastacembelus_armatus
ENSOANG00000007627SF3B610098.400ENSMZEG00005003557sf3b610098.400Maylandia_zebra
ENSOANG00000007627SF3B6100100.000ENSMGAG00000014057SF3B6100100.000Meleagris_gallopavo
ENSOANG00000007627SF3B6100100.000ENSMAUG00000000586-100100.000Mesocricetus_auratus
ENSOANG00000007627SF3B6100100.000ENSMICG00000032874SF3B6100100.000Microcebus_murinus
ENSOANG00000007627SF3B6100100.000ENSMOCG00000014338Sf3b6100100.000Microtus_ochrogaster
ENSOANG00000007627SF3B610099.200ENSMMOG00000015653sf3b610099.200Mola_mola
ENSOANG00000007627SF3B610092.800ENSMODG00000002144SF3B610092.800Monodelphis_domestica
ENSOANG00000007627SF3B610099.200ENSMALG00000019642sf3b66799.200Monopterus_albus
ENSOANG00000007627SF3B6100100.000MGP_CAROLIEiJ_G0017590Sf3b6100100.000Mus_caroli
ENSOANG00000007627SF3B6100100.000ENSMUSG00000037361Sf3b6100100.000Mus_musculus
ENSOANG00000007627SF3B6100100.000MGP_PahariEiJ_G0029348Sf3b6100100.000Mus_pahari
ENSOANG00000007627SF3B6100100.000MGP_SPRETEiJ_G0018434Sf3b6100100.000Mus_spretus
ENSOANG00000007627SF3B6100100.000ENSMPUG00000013957SF3B6100100.000Mustela_putorius_furo
ENSOANG00000007627SF3B610098.400ENSMLUG00000002473SF3B610098.400Myotis_lucifugus
ENSOANG00000007627SF3B6100100.000ENSNGAG00000020256Sf3b6100100.000Nannospalax_galili
ENSOANG00000007627SF3B610098.400ENSNBRG00000018244sf3b610098.400Neolamprologus_brichardi
ENSOANG00000007627SF3B6100100.000ENSNLEG00000000815-100100.000Nomascus_leucogenys
ENSOANG00000007627SF3B687100.000ENSODEG00000009547SF3B692100.000Octodon_degus
ENSOANG00000007627SF3B610098.400ENSONIG00000001219sf3b610098.400Oreochromis_niloticus
ENSOANG00000007627SF3B6100100.000ENSOCUG00000022008SF3B6100100.000Oryctolagus_cuniculus
ENSOANG00000007627SF3B610098.400ENSORLG00000015955sf3b610098.400Oryzias_latipes
ENSOANG00000007627SF3B610098.400ENSORLG00020005875sf3b610098.400Oryzias_latipes_hni
ENSOANG00000007627SF3B610098.400ENSORLG00015001347sf3b610098.400Oryzias_latipes_hsok
ENSOANG00000007627SF3B610098.400ENSOMEG00000014506sf3b610098.400Oryzias_melastigma
ENSOANG00000007627SF3B6100100.000ENSOGAG00000004468SF3B6100100.000Otolemur_garnettii
ENSOANG00000007627SF3B6100100.000ENSOARG00000017819SF3B6100100.000Ovis_aries
ENSOANG00000007627SF3B6100100.000ENSPPAG00000027816SF3B6100100.000Pan_paniscus
ENSOANG00000007627SF3B6100100.000ENSPPRG00000023257SF3B6100100.000Panthera_pardus
ENSOANG00000007627SF3B6100100.000ENSPTIG00000013322SF3B6100100.000Panthera_tigris_altaica
ENSOANG00000007627SF3B6100100.000ENSPTRG00000011709SF3B6100100.000Pan_troglodytes
ENSOANG00000007627SF3B6100100.000ENSPANG00000021963SF3B6100100.000Papio_anubis
ENSOANG00000007627SF3B6100100.000ENSPKIG00000012311sf3b6100100.000Paramormyrops_kingsleyae
ENSOANG00000007627SF3B692100.000ENSPSIG00000017115SF3B6100100.000Pelodiscus_sinensis
ENSOANG00000007627SF3B67896.907ENSPMGG00000014621sf3b68196.907Periophthalmus_magnuspinnatus
ENSOANG00000007627SF3B6100100.000ENSPEMG00000010308Sf3b6100100.000Peromyscus_maniculatus_bairdii
ENSOANG00000007627SF3B69488.136ENSPMAG00000006008sf3b69488.136Petromyzon_marinus
ENSOANG00000007627SF3B69977.419ENSPCIG00000015858-9977.419Phascolarctos_cinereus
ENSOANG00000007627SF3B6100100.000ENSPCIG00000022128-100100.000Phascolarctos_cinereus
ENSOANG00000007627SF3B610098.400ENSPFOG00000012494sf3b610098.400Poecilia_formosa
ENSOANG00000007627SF3B610098.400ENSPLAG00000020460sf3b610098.400Poecilia_latipinna
ENSOANG00000007627SF3B610098.400ENSPMEG00000004426sf3b610098.400Poecilia_mexicana
ENSOANG00000007627SF3B6100100.000ENSPPYG00000012603SF3B6100100.000Pongo_abelii
ENSOANG00000007627SF3B6100100.000ENSPVAG00000011346SF3B6100100.000Pteropus_vampyrus
ENSOANG00000007627SF3B610098.400ENSPNYG00000021832sf3b610098.400Pundamilia_nyererei
ENSOANG00000007627SF3B6100100.000ENSPNAG00000008845sf3b6100100.000Pygocentrus_nattereri
ENSOANG00000007627SF3B610084.800ENSRNOG00000046172Sf3b610084.800Rattus_norvegicus
ENSOANG00000007627SF3B6100100.000ENSRBIG00000039598SF3B6100100.000Rhinopithecus_bieti
ENSOANG00000007627SF3B6100100.000ENSRROG00000011368SF3B6100100.000Rhinopithecus_roxellana
ENSOANG00000007627SF3B6100100.000ENSSBOG00000002914SF3B6100100.000Saimiri_boliviensis_boliviensis
ENSOANG00000007627SF3B6100100.000ENSSFOG00015014370sf3b6100100.000Scleropages_formosus
ENSOANG00000007627SF3B610098.400ENSSMAG00000004566sf3b610098.400Scophthalmus_maximus
ENSOANG00000007627SF3B610098.400ENSSDUG00000006538sf3b610098.400Seriola_dumerili
ENSOANG00000007627SF3B610098.400ENSSLDG00000004494sf3b610098.400Seriola_lalandi_dorsalis
ENSOANG00000007627SF3B6100100.000ENSSARG00000011902-100100.000Sorex_araneus
ENSOANG00000007627SF3B6100100.000ENSSPUG00000014919SF3B6100100.000Sphenodon_punctatus
ENSOANG00000007627SF3B610098.400ENSSPAG00000013201sf3b610098.400Stegastes_partitus
ENSOANG00000007627SF3B6100100.000ENSSSCG00000008587SF3B6100100.000Sus_scrofa
ENSOANG00000007627SF3B6100100.000ENSTGUG00000013191SF3B6100100.000Taeniopygia_guttata
ENSOANG00000007627SF3B610098.400ENSTRUG00000025286sf3b610098.400Takifugu_rubripes
ENSOANG00000007627SF3B610098.400ENSTNIG00000009719sf3b610098.400Tetraodon_nigroviridis
ENSOANG00000007627SF3B692100.000ENSTBEG00000012532SF3B6100100.000Tupaia_belangeri
ENSOANG00000007627SF3B692100.000ENSTTRG00000013430SF3B6100100.000Tursiops_truncatus
ENSOANG00000007627SF3B610081.746ENSUAMG00000000978-10081.746Ursus_americanus
ENSOANG00000007627SF3B6100100.000ENSUAMG00000025329SF3B6100100.000Ursus_americanus
ENSOANG00000007627SF3B6100100.000ENSUMAG00000022835SF3B6100100.000Ursus_maritimus
ENSOANG00000007627SF3B692100.000ENSVPAG00000005546SF3B6100100.000Vicugna_pacos
ENSOANG00000007627SF3B6100100.000ENSVVUG00000010874SF3B6100100.000Vulpes_vulpes
ENSOANG00000007627SF3B610099.200ENSXETG00000018204sf3b610099.200Xenopus_tropicalis
ENSOANG00000007627SF3B68685.841ENSXCOG00000008477sf3b68885.841Xiphophorus_couchianus
ENSOANG00000007627SF3B610098.400ENSXMAG00000010747sf3b610098.400Xiphophorus_maculatus

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