EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOANG00000007987 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM1
Alias: -
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Plus strand
Length: 68189 bases
Position: chrUltra387:180603-248791
Accession: 9757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000012705	R3H	PF01424.22	1.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000012707	R3HDM1-201	6079	-	ENSOANP00000012705	1096 (aa)	-	F7F517

Gene Model

Click here to download ENSOANG00000007987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000007987's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOANG00000007987	R3HDM1	70	47.330	ENSOANG00000001369	ARPP21	89	49.159

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000007987	R3HDM1	100	81.785	ENSG00000048991	R3HDM1	99	87.879	Homo_sapiens
ENSOANG00000007987	R3HDM1	89	46.898	ENSAPOG00000020850	r3hdm1	97	46.020	Acanthochromis_polyacanthus
ENSOANG00000007987	R3HDM1	100	82.146	ENSAMEG00000014886	R3HDM1	100	82.146	Ailuropoda_melanoleuca
ENSOANG00000007987	R3HDM1	89	46.386	ENSAOCG00000005192	r3hdm1	99	45.388	Amphiprion_ocellaris
ENSOANG00000007987	R3HDM1	89	45.437	ENSAPEG00000016108	r3hdm1	99	45.014	Amphiprion_percula
ENSOANG00000007987	R3HDM1	89	45.202	ENSATEG00000000232	r3hdm1	99	44.669	Anabas_testudineus
ENSOANG00000007987	R3HDM1	100	81.545	ENSAPLG00000015231	R3HDM1	100	80.909	Anas_platyrhynchos
ENSOANG00000007987	R3HDM1	100	77.213	ENSACAG00000001676	R3HDM1	100	76.950	Anolis_carolinensis
ENSOANG00000007987	R3HDM1	100	82.252	ENSANAG00000035334	R3HDM1	100	81.982	Aotus_nancymaae
ENSOANG00000007987	R3HDM1	79	48.342	ENSACLG00000027282	r3hdm1	94	47.497	Astatotilapia_calliptera
ENSOANG00000007987	R3HDM1	92	71.703	ENSAMXG00000012861	R3HDM1	100	71.635	Astyanax_mexicanus
ENSOANG00000007987	R3HDM1	87	70.278	ENSAMXG00000003536	r3hdm1	91	71.598	Astyanax_mexicanus
ENSOANG00000007987	R3HDM1	100	79.543	ENSBTAG00000013302	R3HDM1	100	79.631	Bos_taurus
ENSOANG00000007987	R3HDM1	100	82.040	ENSCJAG00000011718	R3HDM1	100	81.859	Callithrix_jacchus
ENSOANG00000007987	R3HDM1	100	82.326	ENSCAFG00000005075	R3HDM1	100	82.326	Canis_familiaris
ENSOANG00000007987	R3HDM1	100	82.236	ENSCAFG00020016119	R3HDM1	100	82.236	Canis_lupus_dingo
ENSOANG00000007987	R3HDM1	100	82.321	ENSCHIG00000020851	R3HDM1	100	82.321	Capra_hircus
ENSOANG00000007987	R3HDM1	100	77.535	ENSCPOG00000012784	R3HDM1	100	82.060	Cavia_porcellus
ENSOANG00000007987	R3HDM1	100	81.695	ENSCCAG00000027199	R3HDM1	100	81.425	Cebus_capucinus
ENSOANG00000007987	R3HDM1	98	88.178	ENSCATG00000023642	R3HDM1	100	81.335	Cercocebus_atys
ENSOANG00000007987	R3HDM1	100	77.428	ENSCLAG00000007962	R3HDM1	100	84.053	Chinchilla_lanigera
ENSOANG00000007987	R3HDM1	100	79.003	ENSCSAG00000016356	R3HDM1	100	79.090	Chlorocebus_sabaeus
ENSOANG00000007987	R3HDM1	87	70.027	ENSCHOG00000013638	R3HDM1	91	68.529	Choloepus_hoffmanni
ENSOANG00000007987	R3HDM1	88	82.834	ENSCPBG00000009645	R3HDM1	100	91.513	Chrysemys_picta_bellii
ENSOANG00000007987	R3HDM1	100	81.622	ENSCANG00000034748	R3HDM1	100	81.351	Colobus_angolensis_palliatus
ENSOANG00000007987	R3HDM1	99	77.612	ENSCGRG00001012357	R3hdm1	97	77.173	Cricetulus_griseus_chok1gshd
ENSOANG00000007987	R3HDM1	99	79.566	ENSCGRG00000012080	R3hdm1	100	85.714	Cricetulus_griseus_crigri
ENSOANG00000007987	R3HDM1	89	42.547	ENSCSEG00000008944	r3hdm1	99	42.777	Cynoglossus_semilaevis
ENSOANG00000007987	R3HDM1	89	47.633	ENSCVAG00000007582	r3hdm1	99	47.195	Cyprinodon_variegatus
ENSOANG00000007987	R3HDM1	100	78.378	ENSDNOG00000000771	R3HDM1	100	78.288	Dasypus_novemcinctus
ENSOANG00000007987	R3HDM1	100	72.694	ENSETEG00000013606	R3HDM1	91	79.526	Echinops_telfairi
ENSOANG00000007987	R3HDM1	66	42.444	ENSEBUG00000014746	arpp21	97	43.925	Eptatretus_burgeri
ENSOANG00000007987	R3HDM1	100	82.534	ENSEASG00005007392	R3HDM1	100	82.534	Equus_asinus_asinus
ENSOANG00000007987	R3HDM1	100	82.475	ENSECAG00000019114	R3HDM1	100	82.475	Equus_caballus
ENSOANG00000007987	R3HDM1	92	77.941	ENSEEUG00000012589	R3HDM1	89	79.079	Erinaceus_europaeus
ENSOANG00000007987	R3HDM1	93	51.671	ENSELUG00000014413	r3hdm1	100	50.180	Esox_lucius
ENSOANG00000007987	R3HDM1	94	56.250	ENSELUG00000004909	R3HDM1	99	55.131	Esox_lucius
ENSOANG00000007987	R3HDM1	100	82.353	ENSFCAG00000027113	R3HDM1	100	82.534	Felis_catus
ENSOANG00000007987	R3HDM1	75	74.883	ENSFALG00000013731	R3HDM1	93	70.860	Ficedula_albicollis
ENSOANG00000007987	R3HDM1	100	77.885	ENSFDAG00000016478	R3HDM1	100	85.714	Fukomys_damarensis
ENSOANG00000007987	R3HDM1	89	45.961	ENSFHEG00000018713	r3hdm1	100	46.578	Fundulus_heteroclitus
ENSOANG00000007987	R3HDM1	60	61.443	ENSGMOG00000006042	-	74	64.286	Gadus_morhua
ENSOANG00000007987	R3HDM1	83	84.967	ENSGALG00000012246	R3HDM1	99	84.918	Gallus_gallus
ENSOANG00000007987	R3HDM1	79	48.807	ENSGAFG00000006203	r3hdm1	94	48.544	Gambusia_affinis
ENSOANG00000007987	R3HDM1	86	47.161	ENSGACG00000014925	r3hdm1	99	46.259	Gasterosteus_aculeatus
ENSOANG00000007987	R3HDM1	100	81.074	ENSGAGG00000007840	R3HDM1	100	80.801	Gopherus_agassizii
ENSOANG00000007987	R3HDM1	100	82.056	ENSGGOG00000008156	R3HDM1	100	81.785	Gorilla_gorilla
ENSOANG00000007987	R3HDM1	100	77.982	ENSHGLG00000015718	R3HDM1	100	85.050	Heterocephalus_glaber_female
ENSOANG00000007987	R3HDM1	100	77.895	ENSHGLG00100003184	-	100	85.050	Heterocephalus_glaber_male
ENSOANG00000007987	R3HDM1	100	59.982	ENSHGLG00100015374	-	100	63.728	Heterocephalus_glaber_male
ENSOANG00000007987	R3HDM1	79	44.178	ENSHCOG00000013366	r3hdm1	87	58.987	Hippocampus_comes
ENSOANG00000007987	R3HDM1	81	66.110	ENSIPUG00000001676	R3HDM1	99	57.372	Ictalurus_punctatus
ENSOANG00000007987	R3HDM1	83	68.072	ENSIPUG00000013629	r3hdm1	95	69.688	Ictalurus_punctatus
ENSOANG00000007987	R3HDM1	100	81.244	ENSSTOG00000007572	R3HDM1	100	85.714	Ictidomys_tridecemlineatus
ENSOANG00000007987	R3HDM1	95	72.587	ENSLACG00000005334	R3HDM1	100	72.852	Latimeria_chalumnae
ENSOANG00000007987	R3HDM1	100	66.607	ENSLOCG00000001641	r3hdm1	100	66.039	Lepisosteus_oculatus
ENSOANG00000007987	R3HDM1	100	78.966	ENSLAFG00000009065	R3HDM1	100	78.878	Loxodonta_africana
ENSOANG00000007987	R3HDM1	100	81.785	ENSMFAG00000030331	R3HDM1	100	81.515	Macaca_fascicularis
ENSOANG00000007987	R3HDM1	100	81.605	ENSMMUG00000009844	R3HDM1	100	81.335	Macaca_mulatta
ENSOANG00000007987	R3HDM1	100	81.695	ENSMNEG00000027793	R3HDM1	100	81.425	Macaca_nemestrina
ENSOANG00000007987	R3HDM1	100	81.876	ENSMLEG00000043189	R3HDM1	100	81.605	Mandrillus_leucophaeus
ENSOANG00000007987	R3HDM1	89	47.514	ENSMAMG00000004532	r3hdm1	99	46.782	Mastacembelus_armatus
ENSOANG00000007987	R3HDM1	89	47.469	ENSMZEG00005003157	r3hdm1	99	46.432	Maylandia_zebra
ENSOANG00000007987	R3HDM1	100	81.148	ENSMGAG00000012461	R3HDM1	100	80.601	Meleagris_gallopavo
ENSOANG00000007987	R3HDM1	100	77.293	ENSMAUG00000010315	R3hdm1	100	86.047	Mesocricetus_auratus
ENSOANG00000007987	R3HDM1	100	80.198	ENSMICG00000005900	-	100	80.108	Microcebus_murinus
ENSOANG00000007987	R3HDM1	96	62.383	ENSMICG00000042655	-	100	78.818	Microcebus_murinus
ENSOANG00000007987	R3HDM1	50	85.294	ENSMOCG00000019833	-	100	85.714	Microtus_ochrogaster
ENSOANG00000007987	R3HDM1	90	79.465	ENSMODG00000000923	R3HDM1	97	79.274	Monodelphis_domestica
ENSOANG00000007987	R3HDM1	99	44.914	ENSMALG00000009000	r3hdm1	100	44.406	Monopterus_albus
ENSOANG00000007987	R3HDM1	100	77.125	MGP_CAROLIEiJ_G0014543	R3hdm1	100	85.050	Mus_caroli
ENSOANG00000007987	R3HDM1	100	76.775	ENSMUSG00000056211	R3hdm1	100	85.050	Mus_musculus
ENSOANG00000007987	R3HDM1	100	76.862	MGP_PahariEiJ_G0027779	R3hdm1	100	84.718	Mus_pahari
ENSOANG00000007987	R3HDM1	100	76.775	MGP_SPRETEiJ_G0015350	R3hdm1	100	85.050	Mus_spretus
ENSOANG00000007987	R3HDM1	100	82.204	ENSMPUG00000002412	R3HDM1	100	82.204	Mustela_putorius_furo
ENSOANG00000007987	R3HDM1	100	80.845	ENSMLUG00000013824	R3HDM1	100	80.845	Myotis_lucifugus
ENSOANG00000007987	R3HDM1	100	81.876	ENSNLEG00000008622	R3HDM1	100	81.605	Nomascus_leucogenys
ENSOANG00000007987	R3HDM1	89	73.081	ENSMEUG00000011784	R3HDM1	99	73.183	Notamacropus_eugenii
ENSOANG00000007987	R3HDM1	100	77.233	ENSODEG00000008607	R3HDM1	100	85.382	Octodon_degus
ENSOANG00000007987	R3HDM1	95	46.553	ENSONIG00000012017	r3hdm1	98	46.452	Oreochromis_niloticus
ENSOANG00000007987	R3HDM1	89	80.000	ENSOCUG00000017366	R3HDM1	98	79.798	Oryctolagus_cuniculus
ENSOANG00000007987	R3HDM1	79	47.426	ENSORLG00000004297	r3hdm1	94	46.988	Oryzias_latipes
ENSOANG00000007987	R3HDM1	89	46.334	ENSORLG00015017355	r3hdm1	99	46.334	Oryzias_latipes_hsok
ENSOANG00000007987	R3HDM1	100	80.832	ENSOGAG00000003136	R3HDM1	100	80.741	Otolemur_garnettii
ENSOANG00000007987	R3HDM1	100	82.396	ENSOARG00000010788	R3HDM1	100	82.396	Ovis_aries
ENSOANG00000007987	R3HDM1	100	81.638	ENSPPAG00000027858	R3HDM1	100	81.368	Pan_paniscus
ENSOANG00000007987	R3HDM1	100	82.172	ENSPPRG00000002626	R3HDM1	100	82.353	Panthera_pardus
ENSOANG00000007987	R3HDM1	100	82.081	ENSPTIG00000016581	R3HDM1	100	82.262	Panthera_tigris_altaica
ENSOANG00000007987	R3HDM1	100	81.548	ENSPTRG00000012494	R3HDM1	100	81.278	Pan_troglodytes
ENSOANG00000007987	R3HDM1	100	81.966	ENSPANG00000026448	R3HDM1	100	81.695	Papio_anubis
ENSOANG00000007987	R3HDM1	92	66.830	ENSPKIG00000004328	r3hdm1	91	75.719	Paramormyrops_kingsleyae
ENSOANG00000007987	R3HDM1	100	81.056	ENSPSIG00000012915	R3HDM1	100	80.892	Pelodiscus_sinensis
ENSOANG00000007987	R3HDM1	100	77.914	ENSPEMG00000015187	R3hdm1	100	85.714	Peromyscus_maniculatus_bairdii
ENSOANG00000007987	R3HDM1	87	43.947	ENSPMAG00000003369	-	99	44.530	Petromyzon_marinus
ENSOANG00000007987	R3HDM1	100	84.887	ENSPCIG00000002491	R3HDM1	100	84.497	Phascolarctos_cinereus
ENSOANG00000007987	R3HDM1	89	46.475	ENSPFOG00000015036	r3hdm1	99	45.336	Poecilia_formosa
ENSOANG00000007987	R3HDM1	79	49.408	ENSPLAG00000018042	r3hdm1	94	48.652	Poecilia_latipinna
ENSOANG00000007987	R3HDM1	79	49.458	ENSPMEG00000023947	r3hdm1	94	48.272	Poecilia_mexicana
ENSOANG00000007987	R3HDM1	89	48.701	ENSPREG00000007902	r3hdm1	89	61.060	Poecilia_reticulata
ENSOANG00000007987	R3HDM1	100	80.901	ENSPPYG00000012815	R3HDM1	100	80.991	Pongo_abelii
ENSOANG00000007987	R3HDM1	100	70.679	ENSPCAG00000006208	R3HDM1	100	70.407	Procavia_capensis
ENSOANG00000007987	R3HDM1	100	78.578	ENSPCOG00000012698	R3HDM1	100	78.218	Propithecus_coquereli
ENSOANG00000007987	R3HDM1	100	74.167	ENSPVAG00000006098	R3HDM1	91	82.034	Pteropus_vampyrus
ENSOANG00000007987	R3HDM1	83	75.641	ENSPNAG00000005436	R3HDM1	99	75.563	Pygocentrus_nattereri
ENSOANG00000007987	R3HDM1	88	69.189	ENSPNAG00000013952	r3hdm1	100	62.676	Pygocentrus_nattereri
ENSOANG00000007987	R3HDM1	100	76.491	ENSRNOG00000004099	R3hdm1	100	76.646	Rattus_norvegicus
ENSOANG00000007987	R3HDM1	100	80.288	ENSRBIG00000033317	R3HDM1	100	92.989	Rhinopithecus_bieti
ENSOANG00000007987	R3HDM1	100	81.622	ENSRROG00000034534	R3HDM1	100	81.261	Rhinopithecus_roxellana
ENSOANG00000007987	R3HDM1	100	81.876	ENSSBOG00000020389	R3HDM1	100	81.605	Saimiri_boliviensis_boliviensis
ENSOANG00000007987	R3HDM1	100	85.364	ENSSHAG00000016999	R3HDM1	100	85.182	Sarcophilus_harrisii
ENSOANG00000007987	R3HDM1	100	57.335	ENSSFOG00015019851	-	99	57.959	Scleropages_formosus
ENSOANG00000007987	R3HDM1	92	69.734	ENSSFOG00015014134	r3hdm1	100	61.041	Scleropages_formosus
ENSOANG00000007987	R3HDM1	99	43.771	ENSSMAG00000001669	r3hdm1	51	52.381	Scophthalmus_maximus
ENSOANG00000007987	R3HDM1	89	45.685	ENSSDUG00000010749	r3hdm1	99	45.619	Seriola_dumerili
ENSOANG00000007987	R3HDM1	99	45.641	ENSSLDG00000004499	r3hdm1	99	45.494	Seriola_lalandi_dorsalis
ENSOANG00000007987	R3HDM1	69	78.405	ENSSARG00000000352	-	69	78.405	Sorex_araneus
ENSOANG00000007987	R3HDM1	100	81.967	ENSSPUG00000004167	R3HDM1	100	81.694	Sphenodon_punctatus
ENSOANG00000007987	R3HDM1	89	48.718	ENSSPAG00000004648	r3hdm1	99	47.805	Stegastes_partitus
ENSOANG00000007987	R3HDM1	100	82.114	ENSSSCG00000015692	R3HDM1	100	82.114	Sus_scrofa
ENSOANG00000007987	R3HDM1	100	76.776	ENSTGUG00000011750	R3HDM1	100	76.594	Taeniopygia_guttata
ENSOANG00000007987	R3HDM1	79	46.895	ENSTRUG00000011654	r3hdm1	93	45.484	Takifugu_rubripes
ENSOANG00000007987	R3HDM1	83	46.324	ENSTNIG00000010362	r3hdm1	95	43.971	Tetraodon_nigroviridis
ENSOANG00000007987	R3HDM1	100	76.337	ENSTTRG00000003935	R3HDM1	100	76.247	Tursiops_truncatus
ENSOANG00000007987	R3HDM1	70	82.074	ENSUAMG00000024806	R3HDM1	95	86.372	Ursus_americanus
ENSOANG00000007987	R3HDM1	100	77.958	ENSUMAG00000005552	R3HDM1	100	77.958	Ursus_maritimus
ENSOANG00000007987	R3HDM1	93	77.996	ENSVPAG00000007333	R3HDM1	93	77.893	Vicugna_pacos
ENSOANG00000007987	R3HDM1	100	79.842	ENSVVUG00000006457	R3HDM1	100	80.049	Vulpes_vulpes
ENSOANG00000007987	R3HDM1	89	68.357	ENSXETG00000019330	r3hdm1	100	68.256	Xenopus_tropicalis
ENSOANG00000007987	R3HDM1	67	49.105	ENSXCOG00000017448	r3hdm1	92	49.799	Xiphophorus_couchianus
ENSOANG00000007987	R3HDM1	89	46.412	ENSXMAG00000007885	r3hdm1	99	45.320	Xiphophorus_maculatus