EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOANG00000010716 (Gene tree)
Gene ID: -
Gene Symbol: CPSF1
Alias: -
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Plus strand
Length: 11611 bases
Position: chrContig22643:545-12155
Accession: 2324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000016994	CPSF_A	PF03178.15	2.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000016997	CPSF1-201	2874	-	ENSOANP00000016994	958 (aa)	-	F6RG92

Gene Model

Click here to download ENSOANG00000010716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000010716's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000010716	CPSF1	88	91.429	ENSG00000071894	CPSF1	77	91.538	Homo_sapiens
ENSOANG00000010716	CPSF1	89	78.571	ENSAPOG00000019621	cpsf1	61	78.571	Acanthochromis_polyacanthus
ENSOANG00000010716	CPSF1	88	92.857	ENSAMEG00000005557	CPSF1	61	92.857	Ailuropoda_melanoleuca
ENSOANG00000010716	CPSF1	89	75.714	ENSACIG00000006112	cpsf1	59	75.714	Amphilophus_citrinellus
ENSOANG00000010716	CPSF1	89	78.571	ENSAOCG00000007120	cpsf1	58	78.571	Amphiprion_ocellaris
ENSOANG00000010716	CPSF1	89	78.571	ENSAPEG00000005755	cpsf1	59	78.571	Amphiprion_percula
ENSOANG00000010716	CPSF1	89	77.143	ENSATEG00000011097	cpsf1	61	77.143	Anabas_testudineus
ENSOANG00000010716	CPSF1	87	87.143	ENSACAG00000009655	CPSF1	62	87.143	Anolis_carolinensis
ENSOANG00000010716	CPSF1	88	91.429	ENSANAG00000036514	CPSF1	58	91.429	Aotus_nancymaae
ENSOANG00000010716	CPSF1	89	77.143	ENSACLG00000012231	cpsf1	61	77.143	Astatotilapia_calliptera
ENSOANG00000010716	CPSF1	88	79.286	ENSAMXG00000008485	cpsf1	61	79.286	Astyanax_mexicanus
ENSOANG00000010716	CPSF1	88	92.857	ENSBTAG00000008355	CPSF1	60	92.857	Bos_taurus
ENSOANG00000010716	CPSF1	80	39.837	WBGene00022301	cpsf-1	63	39.837	Caenorhabditis_elegans
ENSOANG00000010716	CPSF1	88	90.714	ENSCJAG00000021421	CPSF1	58	90.714	Callithrix_jacchus
ENSOANG00000010716	CPSF1	88	92.857	ENSCAFG00000001600	CPSF1	62	92.857	Canis_familiaris
ENSOANG00000010716	CPSF1	88	92.857	ENSCAFG00020020821	CPSF1	58	92.857	Canis_lupus_dingo
ENSOANG00000010716	CPSF1	84	89.583	ENSCHIG00000015833	CPSF1	57	89.583	Capra_hircus
ENSOANG00000010716	CPSF1	88	92.143	ENSTSYG00000028560	CPSF1	58	92.143	Carlito_syrichta
ENSOANG00000010716	CPSF1	88	92.143	ENSCAPG00000014921	CPSF1	60	92.143	Cavia_aperea
ENSOANG00000010716	CPSF1	88	92.143	ENSCPOG00000011448	CPSF1	59	92.143	Cavia_porcellus
ENSOANG00000010716	CPSF1	88	91.429	ENSCCAG00000037658	CPSF1	58	91.429	Cebus_capucinus
ENSOANG00000010716	CPSF1	88	91.429	ENSCATG00000037234	CPSF1	58	91.429	Cercocebus_atys
ENSOANG00000010716	CPSF1	88	92.143	ENSCLAG00000012166	CPSF1	58	92.143	Chinchilla_lanigera
ENSOANG00000010716	CPSF1	88	91.429	ENSCSAG00000008502	CPSF1	58	91.429	Chlorocebus_sabaeus
ENSOANG00000010716	CPSF1	87	86.744	ENSCPBG00000018910	CPSF1	56	86.744	Chrysemys_picta_bellii
ENSOANG00000010716	CPSF1	95	46.341	ENSCING00000000514	-	65	46.341	Ciona_intestinalis
ENSOANG00000010716	CPSF1	85	47.708	ENSCSAVG00000002293	-	59	45.810	Ciona_savignyi
ENSOANG00000010716	CPSF1	88	81.450	ENSCANG00000032760	CPSF1	58	81.450	Colobus_angolensis_palliatus
ENSOANG00000010716	CPSF1	88	92.143	ENSCGRG00001016344	Cpsf1	58	92.143	Cricetulus_griseus_chok1gshd
ENSOANG00000010716	CPSF1	88	92.143	ENSCGRG00000003118	Cpsf1	57	92.143	Cricetulus_griseus_crigri
ENSOANG00000010716	CPSF1	89	75.714	ENSCSEG00000013464	cpsf1	63	75.714	Cynoglossus_semilaevis
ENSOANG00000010716	CPSF1	79	77.143	ENSCVAG00000014059	cpsf1	54	77.143	Cyprinodon_variegatus
ENSOANG00000010716	CPSF1	89	78.571	ENSDARG00000034178	cpsf1	58	78.571	Danio_rerio
ENSOANG00000010716	CPSF1	88	91.429	ENSDORG00000006278	Cpsf1	60	91.429	Dipodomys_ordii
ENSOANG00000010716	CPSF1	85	60.000	FBgn0024698	Cpsf160	56	60.000	Drosophila_melanogaster
ENSOANG00000010716	CPSF1	79	96.429	ENSETEG00000006022	CPSF1	53	96.429	Echinops_telfairi
ENSOANG00000010716	CPSF1	88	92.857	ENSEASG00005010774	CPSF1	58	92.857	Equus_asinus_asinus
ENSOANG00000010716	CPSF1	88	92.857	ENSECAG00000022209	CPSF1	58	92.857	Equus_caballus
ENSOANG00000010716	CPSF1	88	91.429	ENSEEUG00000000471	CPSF1	58	91.429	Erinaceus_europaeus
ENSOANG00000010716	CPSF1	88	77.857	ENSELUG00000012271	cpsf1	62	77.857	Esox_lucius
ENSOANG00000010716	CPSF1	88	92.143	ENSFDAG00000016060	CPSF1	58	92.143	Fukomys_damarensis
ENSOANG00000010716	CPSF1	89	77.143	ENSFHEG00000016801	cpsf1	58	77.143	Fundulus_heteroclitus
ENSOANG00000010716	CPSF1	88	74.286	ENSGMOG00000000796	cpsf1	58	74.286	Gadus_morhua
ENSOANG00000010716	CPSF1	88	73.846	ENSGAFG00000018890	cpsf1	61	74.545	Gambusia_affinis
ENSOANG00000010716	CPSF1	89	76.429	ENSGACG00000008703	cpsf1	59	76.429	Gasterosteus_aculeatus
ENSOANG00000010716	CPSF1	81	87.176	ENSGAGG00000004276	CPSF1	63	87.176	Gopherus_agassizii
ENSOANG00000010716	CPSF1	88	91.429	ENSGGOG00000016185	CPSF1	58	91.429	Gorilla_gorilla
ENSOANG00000010716	CPSF1	89	77.143	ENSHBUG00000018900	cpsf1	58	77.143	Haplochromis_burtoni
ENSOANG00000010716	CPSF1	88	92.143	ENSHGLG00000016139	CPSF1	58	92.143	Heterocephalus_glaber_female
ENSOANG00000010716	CPSF1	88	92.143	ENSHGLG00100009750	CPSF1	58	92.143	Heterocephalus_glaber_male
ENSOANG00000010716	CPSF1	89	78.571	ENSHCOG00000018509	cpsf1	59	78.571	Hippocampus_comes
ENSOANG00000010716	CPSF1	89	77.857	ENSIPUG00000011259	cpsf1	58	78.261	Ictalurus_punctatus
ENSOANG00000010716	CPSF1	88	92.143	ENSSTOG00000009957	CPSF1	60	92.143	Ictidomys_tridecemlineatus
ENSOANG00000010716	CPSF1	88	90.714	ENSJJAG00000023002	Cpsf1	58	90.714	Jaculus_jaculus
ENSOANG00000010716	CPSF1	89	76.429	ENSKMAG00000001940	cpsf1	61	76.429	Kryptolebias_marmoratus
ENSOANG00000010716	CPSF1	91	77.857	ENSLBEG00000003601	cpsf1	60	77.857	Labrus_bergylta
ENSOANG00000010716	CPSF1	68	81.429	ENSLACG00000000233	CPSF1	55	81.429	Latimeria_chalumnae
ENSOANG00000010716	CPSF1	87	83.571	ENSLOCG00000008484	cpsf1	57	83.571	Lepisosteus_oculatus
ENSOANG00000010716	CPSF1	87	92.857	ENSLAFG00000022601	CPSF1	59	92.857	Loxodonta_africana
ENSOANG00000010716	CPSF1	88	91.429	ENSMFAG00000037013	CPSF1	58	91.429	Macaca_fascicularis
ENSOANG00000010716	CPSF1	88	91.429	ENSMMUG00000007380	CPSF1	60	89.583	Macaca_mulatta
ENSOANG00000010716	CPSF1	88	91.429	ENSMNEG00000043564	CPSF1	60	91.429	Macaca_nemestrina
ENSOANG00000010716	CPSF1	88	91.429	ENSMLEG00000043010	CPSF1	58	91.429	Mandrillus_leucophaeus
ENSOANG00000010716	CPSF1	89	78.571	ENSMAMG00000003803	cpsf1	61	78.571	Mastacembelus_armatus
ENSOANG00000010716	CPSF1	86	77.143	ENSMZEG00005001168	cpsf1	57	77.143	Maylandia_zebra
ENSOANG00000010716	CPSF1	88	92.857	ENSMAUG00000003601	Cpsf1	58	92.857	Mesocricetus_auratus
ENSOANG00000010716	CPSF1	88	92.143	ENSMICG00000015767	CPSF1	58	92.143	Microcebus_murinus
ENSOANG00000010716	CPSF1	88	92.857	ENSMOCG00000022758	Cpsf1	58	92.857	Microtus_ochrogaster
ENSOANG00000010716	CPSF1	89	78.571	ENSMMOG00000021245	cpsf1	58	78.571	Mola_mola
ENSOANG00000010716	CPSF1	87	92.857	ENSMODG00000010755	CPSF1	57	92.857	Monodelphis_domestica
ENSOANG00000010716	CPSF1	89	77.143	ENSMALG00000020545	cpsf1	59	77.143	Monopterus_albus
ENSOANG00000010716	CPSF1	88	92.857	MGP_CAROLIEiJ_G0019936	Cpsf1	58	92.857	Mus_caroli
ENSOANG00000010716	CPSF1	88	92.857	ENSMUSG00000034022	Cpsf1	58	92.857	Mus_musculus
ENSOANG00000010716	CPSF1	88	92.857	MGP_PahariEiJ_G0019946	Cpsf1	58	92.857	Mus_pahari
ENSOANG00000010716	CPSF1	88	92.857	MGP_SPRETEiJ_G0020839	Cpsf1	58	92.857	Mus_spretus
ENSOANG00000010716	CPSF1	88	92.857	ENSMPUG00000006419	CPSF1	58	92.857	Mustela_putorius_furo
ENSOANG00000010716	CPSF1	88	92.143	ENSNGAG00000022460	Cpsf1	58	92.143	Nannospalax_galili
ENSOANG00000010716	CPSF1	89	77.143	ENSNBRG00000000813	cpsf1	59	77.143	Neolamprologus_brichardi
ENSOANG00000010716	CPSF1	85	95.455	ENSNLEG00000010633	-	63	95.455	Nomascus_leucogenys
ENSOANG00000010716	CPSF1	79	98.361	ENSMEUG00000014922	CPSF1	54	98.361	Notamacropus_eugenii
ENSOANG00000010716	CPSF1	88	92.143	ENSODEG00000013995	CPSF1	58	92.143	Octodon_degus
ENSOANG00000010716	CPSF1	89	77.143	ENSONIG00000007676	cpsf1	58	77.143	Oreochromis_niloticus
ENSOANG00000010716	CPSF1	89	78.571	ENSORLG00000013544	cpsf1	59	78.571	Oryzias_latipes
ENSOANG00000010716	CPSF1	89	78.571	ENSORLG00020021693	cpsf1	59	78.571	Oryzias_latipes_hni
ENSOANG00000010716	CPSF1	89	78.571	ENSORLG00015009979	cpsf1	59	78.571	Oryzias_latipes_hsok
ENSOANG00000010716	CPSF1	89	78.571	ENSOMEG00000011849	cpsf1	59	78.571	Oryzias_melastigma
ENSOANG00000010716	CPSF1	88	92.143	ENSOGAG00000000315	CPSF1	58	92.143	Otolemur_garnettii
ENSOANG00000010716	CPSF1	88	91.429	ENSPPAG00000019280	CPSF1	59	91.429	Pan_paniscus
ENSOANG00000010716	CPSF1	88	91.429	ENSPTRG00000051253	-	58	91.429	Pan_troglodytes
ENSOANG00000010716	CPSF1	88	91.429	ENSPTRG00000049288	-	58	91.429	Pan_troglodytes
ENSOANG00000010716	CPSF1	88	91.429	ENSPANG00000015005	CPSF1	60	91.429	Papio_anubis
ENSOANG00000010716	CPSF1	91	80.714	ENSPKIG00000002582	cpsf1	65	80.714	Paramormyrops_kingsleyae
ENSOANG00000010716	CPSF1	87	92.857	ENSPCIG00000009035	CPSF1	59	92.857	Phascolarctos_cinereus
ENSOANG00000010716	CPSF1	89	77.857	ENSPFOG00000012870	cpsf1	59	77.857	Poecilia_formosa
ENSOANG00000010716	CPSF1	89	77.857	ENSPREG00000016307	cpsf1	59	77.857	Poecilia_reticulata
ENSOANG00000010716	CPSF1	88	92.143	ENSPPYG00000018973	CPSF1	58	92.143	Pongo_abelii
ENSOANG00000010716	CPSF1	87	85.714	ENSPCAG00000011541	CPSF1	59	85.714	Procavia_capensis
ENSOANG00000010716	CPSF1	88	85.290	ENSPCOG00000020001	CPSF1	58	85.290	Propithecus_coquereli
ENSOANG00000010716	CPSF1	88	92.857	ENSPVAG00000006761	CPSF1	58	92.857	Pteropus_vampyrus
ENSOANG00000010716	CPSF1	89	77.143	ENSPNYG00000004906	cpsf1	61	77.143	Pundamilia_nyererei
ENSOANG00000010716	CPSF1	89	78.571	ENSPNAG00000024395	cpsf1	58	78.571	Pygocentrus_nattereri
ENSOANG00000010716	CPSF1	88	92.143	ENSRNOG00000030705	Cpsf1	60	90.278	Rattus_norvegicus
ENSOANG00000010716	CPSF1	88	91.429	ENSRBIG00000044907	CPSF1	60	89.583	Rhinopithecus_bieti
ENSOANG00000010716	CPSF1	88	91.429	ENSRROG00000044861	CPSF1	60	89.583	Rhinopithecus_roxellana
ENSOANG00000010716	CPSF1	88	91.429	ENSSBOG00000027177	CPSF1	60	91.429	Saimiri_boliviensis_boliviensis
ENSOANG00000010716	CPSF1	87	92.143	ENSSHAG00000006500	CPSF1	57	92.143	Sarcophilus_harrisii
ENSOANG00000010716	CPSF1	89	80.714	ENSSFOG00015004606	cpsf1	62	80.714	Scleropages_formosus
ENSOANG00000010716	CPSF1	89	78.571	ENSSMAG00000020547	cpsf1	59	78.571	Scophthalmus_maximus
ENSOANG00000010716	CPSF1	89	77.857	ENSSDUG00000001100	cpsf1	58	77.857	Seriola_dumerili
ENSOANG00000010716	CPSF1	89	77.857	ENSSLDG00000003619	cpsf1	58	77.857	Seriola_lalandi_dorsalis
ENSOANG00000010716	CPSF1	87	92.143	ENSSARG00000003643	CPSF1	59	92.143	Sorex_araneus
ENSOANG00000010716	CPSF1	87	89.286	ENSSPUG00000014396	CPSF1	60	89.286	Sphenodon_punctatus
ENSOANG00000010716	CPSF1	89	78.571	ENSSPAG00000005349	cpsf1	59	78.571	Stegastes_partitus
ENSOANG00000010716	CPSF1	88	91.429	ENSSSCG00000005906	CPSF1	58	91.429	Sus_scrofa
ENSOANG00000010716	CPSF1	89	75.714	ENSTRUG00000013134	cpsf1	61	75.714	Takifugu_rubripes
ENSOANG00000010716	CPSF1	89	75.352	ENSTNIG00000014027	cpsf1	59	75.352	Tetraodon_nigroviridis
ENSOANG00000010716	CPSF1	63	86.829	ENSTBEG00000001756	CPSF1	50	86.131	Tupaia_belangeri
ENSOANG00000010716	CPSF1	88	92.857	ENSUAMG00000006476	CPSF1	59	92.857	Ursus_americanus
ENSOANG00000010716	CPSF1	89	77.857	ENSXCOG00000003608	cpsf1	58	77.857	Xiphophorus_couchianus
ENSOANG00000010716	CPSF1	89	77.857	ENSXMAG00000005798	cpsf1	58	77.857	Xiphophorus_maculatus