EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOANG00000012054 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Minus strand
Length: 57785 bases
Position: chrUltra36:1237610-1295394
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000019090	zf-CCCH	PF00642.24	4.9e-10	1	1
ENSOANP00000019091	zf-CCCH	PF00642.24	5.3e-10	1	1
ENSOANP00000019090	zf-CCCH_2	PF14608.6	7.5e-07	1	3
ENSOANP00000019090	zf-CCCH_2	PF14608.6	7.5e-07	2	3
ENSOANP00000019090	zf-CCCH_2	PF14608.6	7.5e-07	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000019094	-	3991	-	ENSOANP00000019091	1223 (aa)	-	F7DDS5
ENSOANT00000019093	-	4893	XM_007669166	ENSOANP00000019090	1167 (aa)	XP_007667356	F7DDT2

Gene Model

Click here to download ENSOANG00000012054's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000012054's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOANG00000012054	-	58	53.261	ENSOANG00000001794	ZC3H4	77	37.053

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000012054	-	96	70.802	ENSG00000188177	ZC3H6	99	70.295	Homo_sapiens
ENSOANG00000012054	-	61	66.359	ENSAPOG00000002681	zc3h6	88	45.261	Acanthochromis_polyacanthus
ENSOANG00000012054	-	96	71.660	ENSAMEG00000016194	ZC3H6	99	71.064	Ailuropoda_melanoleuca
ENSOANG00000012054	-	58	70.312	ENSACIG00000021843	zc3h6	85	42.442	Amphilophus_citrinellus
ENSOANG00000012054	-	81	43.060	ENSAOCG00000004039	zc3h6	98	39.638	Amphiprion_ocellaris
ENSOANG00000012054	-	81	43.117	ENSAPEG00000014561	zc3h6	98	39.843	Amphiprion_percula
ENSOANG00000012054	-	96	41.512	ENSATEG00000019063	zc3h6	97	40.815	Anabas_testudineus
ENSOANG00000012054	-	96	73.394	ENSAPLG00000014287	ZC3H6	99	73.561	Anas_platyrhynchos
ENSOANG00000012054	-	96	70.826	ENSANAG00000024229	ZC3H6	99	70.320	Aotus_nancymaae
ENSOANG00000012054	-	96	40.810	ENSACLG00000026343	zc3h6	97	40.434	Astatotilapia_calliptera
ENSOANG00000012054	-	96	70.911	ENSCJAG00000016479	ZC3H6	99	70.405	Callithrix_jacchus
ENSOANG00000012054	-	96	70.553	ENSCAFG00000007160	ZC3H6	99	70.213	Canis_familiaris
ENSOANG00000012054	-	96	69.676	ENSCAFG00020017525	ZC3H6	99	69.336	Canis_lupus_dingo
ENSOANG00000012054	-	82	65.596	ENSCHIG00000019719	-	96	65.445	Capra_hircus
ENSOANG00000012054	-	96	71.814	ENSTSYG00000031857	ZC3H6	99	71.055	Carlito_syrichta
ENSOANG00000012054	-	96	66.526	ENSCPOG00000003445	ZC3H6	100	66.272	Cavia_porcellus
ENSOANG00000012054	-	96	71.392	ENSCATG00000036595	ZC3H6	100	70.391	Cercocebus_atys
ENSOANG00000012054	-	92	68.144	ENSCLAG00000006605	ZC3H6	100	68.406	Chinchilla_lanigera
ENSOANG00000012054	-	92	70.111	ENSCSAG00000016793	ZC3H6	100	70.112	Chlorocebus_sabaeus
ENSOANG00000012054	-	96	71.284	ENSCANG00000041036	ZC3H6	100	70.777	Colobus_angolensis_palliatus
ENSOANG00000012054	-	96	61.369	ENSCGRG00001022022	Zc3h6	99	61.369	Cricetulus_griseus_chok1gshd
ENSOANG00000012054	-	96	63.706	ENSCGRG00000016162	Zc3h6	100	63.790	Cricetulus_griseus_crigri
ENSOANG00000012054	-	69	60.075	ENSCSEG00000012267	zc3h6	84	59.220	Cynoglossus_semilaevis
ENSOANG00000012054	-	96	66.241	ENSDNOG00000044811	ZC3H6	100	66.071	Dasypus_novemcinctus
ENSOANG00000012054	-	96	67.625	ENSDORG00000013967	Zc3h6	100	66.526	Dipodomys_ordii
ENSOANG00000012054	-	86	69.940	ENSEASG00005006493	ZC3H6	100	69.779	Equus_asinus_asinus
ENSOANG00000012054	-	96	71.224	ENSECAG00000023620	ZC3H6	99	70.464	Equus_caballus
ENSOANG00000012054	-	78	58.542	ENSEEUG00000013883	-	84	58.542	Erinaceus_europaeus
ENSOANG00000012054	-	94	36.923	ENSELUG00000012256	zc3h6	89	38.989	Esox_lucius
ENSOANG00000012054	-	96	71.745	ENSFCAG00000008089	ZC3H6	99	71.234	Felis_catus
ENSOANG00000012054	-	96	72.971	ENSFALG00000011589	ZC3H6	99	72.134	Ficedula_albicollis
ENSOANG00000012054	-	96	70.186	ENSFDAG00000002521	ZC3H6	99	69.679	Fukomys_damarensis
ENSOANG00000012054	-	96	72.987	ENSGALG00000008269	ZC3H6	98	72.903	Gallus_gallus
ENSOANG00000012054	-	81	40.844	ENSGAFG00000006771	zc3h6	86	41.488	Gambusia_affinis
ENSOANG00000012054	-	70	64.319	ENSGACG00000005343	zc3h6	100	39.610	Gasterosteus_aculeatus
ENSOANG00000012054	-	96	75.505	ENSGAGG00000010857	ZC3H6	99	75.084	Gopherus_agassizii
ENSOANG00000012054	-	96	70.886	ENSGGOG00000001665	ZC3H6	99	70.380	Gorilla_gorilla
ENSOANG00000012054	-	96	40.891	ENSHBUG00000010088	zc3h6	97	40.514	Haplochromis_burtoni
ENSOANG00000012054	-	96	69.543	ENSHGLG00000011882	ZC3H6	96	69.036	Heterocephalus_glaber_female
ENSOANG00000012054	-	96	67.540	ENSHGLG00100002559	ZC3H6	100	67.033	Heterocephalus_glaber_male
ENSOANG00000012054	-	96	39.459	ENSHCOG00000012519	zc3h6	99	38.522	Hippocampus_comes
ENSOANG00000012054	-	92	68.081	ENSSTOG00000008120	-	100	67.688	Ictidomys_tridecemlineatus
ENSOANG00000012054	-	96	66.357	ENSJJAG00000013206	Zc3h6	99	65.934	Jaculus_jaculus
ENSOANG00000012054	-	81	42.525	ENSKMAG00000016252	zc3h6	97	39.760	Kryptolebias_marmoratus
ENSOANG00000012054	-	66	68.912	ENSLBEG00000003054	zc3h6	87	46.530	Labrus_bergylta
ENSOANG00000012054	-	96	55.021	ENSLACG00000012014	ZC3H6	99	54.959	Latimeria_chalumnae
ENSOANG00000012054	-	96	49.740	ENSLOCG00000016548	zc3h6	97	49.588	Lepisosteus_oculatus
ENSOANG00000012054	-	94	67.387	ENSLAFG00000001151	ZC3H6	100	66.992	Loxodonta_africana
ENSOANG00000012054	-	96	71.055	ENSMFAG00000036963	ZC3H6	99	70.549	Macaca_fascicularis
ENSOANG00000012054	-	96	71.055	ENSMMUG00000016430	ZC3H6	99	70.549	Macaca_mulatta
ENSOANG00000012054	-	96	70.802	ENSMNEG00000031225	ZC3H6	100	69.832	Macaca_nemestrina
ENSOANG00000012054	-	96	71.308	ENSMLEG00000038821	ZC3H6	99	70.802	Mandrillus_leucophaeus
ENSOANG00000012054	-	96	41.139	ENSMAMG00000021546	zc3h6	98	40.880	Mastacembelus_armatus
ENSOANG00000012054	-	96	40.810	ENSMZEG00005006828	zc3h6	97	40.434	Maylandia_zebra
ENSOANG00000012054	-	96	72.903	ENSMGAG00000003025	ZC3H6	99	72.903	Meleagris_gallopavo
ENSOANG00000012054	-	96	63.145	ENSMAUG00000017009	Zc3h6	99	63.314	Mesocricetus_auratus
ENSOANG00000012054	-	96	71.646	ENSMICG00000036353	ZC3H6	99	71.139	Microcebus_murinus
ENSOANG00000012054	-	96	62.732	ENSMOCG00000002054	Zc3h6	99	62.732	Microtus_ochrogaster
ENSOANG00000012054	-	97	75.218	ENSMODG00000006612	ZC3H6	100	73.950	Monodelphis_domestica
ENSOANG00000012054	-	71	54.485	ENSMALG00000002048	zc3h6	78	54.839	Monopterus_albus
ENSOANG00000012054	-	96	62.511	MGP_CAROLIEiJ_G0024278	Zc3h6	99	62.248	Mus_caroli
ENSOANG00000012054	-	96	62.332	ENSMUSG00000042851	Zc3h6	99	62.763	Mus_musculus
ENSOANG00000012054	-	96	63.269	MGP_PahariEiJ_G0025723	Zc3h6	99	62.848	Mus_pahari
ENSOANG00000012054	-	96	63.100	MGP_SPRETEiJ_G0025198	Zc3h6	99	63.016	Mus_spretus
ENSOANG00000012054	-	92	70.205	ENSMPUG00000009624	ZC3H6	100	69.925	Mustela_putorius_furo
ENSOANG00000012054	-	96	67.990	ENSMLUG00000004896	ZC3H6	99	67.483	Myotis_lucifugus
ENSOANG00000012054	-	96	65.244	ENSNGAG00000013596	Zc3h6	98	65.693	Nannospalax_galili
ENSOANG00000012054	-	61	70.466	ENSNBRG00000015382	zc3h6	97	38.390	Neolamprologus_brichardi
ENSOANG00000012054	-	96	70.414	ENSNLEG00000033657	ZC3H6	99	69.907	Nomascus_leucogenys
ENSOANG00000012054	-	96	66.976	ENSOPRG00000012717	ZC3H6	99	66.132	Ochotona_princeps
ENSOANG00000012054	-	96	66.402	ENSODEG00000009099	ZC3H6	99	65.813	Octodon_degus
ENSOANG00000012054	-	96	40.307	ENSONIG00000009880	zc3h6	99	39.920	Oreochromis_niloticus
ENSOANG00000012054	-	96	69.238	ENSOCUG00000011125	ZC3H6	100	68.901	Oryctolagus_cuniculus
ENSOANG00000012054	-	96	38.443	ENSORLG00000011179	zc3h6	97	39.546	Oryzias_latipes
ENSOANG00000012054	-	96	38.799	ENSORLG00020017202	zc3h6	97	39.465	Oryzias_latipes_hni
ENSOANG00000012054	-	96	38.412	ENSORLG00015001664	zc3h6	97	39.123	Oryzias_latipes_hsok
ENSOANG00000012054	-	96	39.257	ENSOMEG00000001296	zc3h6	97	39.442	Oryzias_melastigma
ENSOANG00000012054	-	96	70.524	ENSOGAG00000002556	ZC3H6	100	70.017	Otolemur_garnettii
ENSOANG00000012054	-	97	69.865	ENSOARG00000014503	ZC3H6	99	69.100	Ovis_aries
ENSOANG00000012054	-	96	70.946	ENSPPAG00000030495	ZC3H6	100	70.439	Pan_paniscus
ENSOANG00000012054	-	96	71.745	ENSPPRG00000005673	ZC3H6	99	71.234	Panthera_pardus
ENSOANG00000012054	-	96	70.784	ENSPTIG00000015800	ZC3H6	99	70.273	Panthera_tigris_altaica
ENSOANG00000012054	-	96	70.802	ENSPTRG00000012363	ZC3H6	99	70.295	Pan_troglodytes
ENSOANG00000012054	-	96	71.055	ENSPANG00000025224	ZC3H6	99	70.549	Papio_anubis
ENSOANG00000012054	-	63	71.875	ENSPKIG00000007353	zc3h6	90	51.952	Paramormyrops_kingsleyae
ENSOANG00000012054	-	95	74.767	ENSPSIG00000002520	ZC3H6	100	74.428	Pelodiscus_sinensis
ENSOANG00000012054	-	96	63.705	ENSPEMG00000000918	Zc3h6	100	63.370	Peromyscus_maniculatus_bairdii
ENSOANG00000012054	-	92	78.585	ENSPCIG00000029741	ZC3H6	100	78.305	Phascolarctos_cinereus
ENSOANG00000012054	-	81	42.142	ENSPFOG00000015748	zc3h6	99	41.857	Poecilia_formosa
ENSOANG00000012054	-	81	41.942	ENSPLAG00000002469	zc3h6	99	41.699	Poecilia_latipinna
ENSOANG00000012054	-	81	42.142	ENSPMEG00000020802	zc3h6	99	42.412	Poecilia_mexicana
ENSOANG00000012054	-	76	66.019	ENSPREG00000023126	zc3h6	86	58.397	Poecilia_reticulata
ENSOANG00000012054	-	78	68.009	ENSPCAG00000015468	ZC3H6	78	68.004	Procavia_capensis
ENSOANG00000012054	-	96	71.284	ENSPCOG00000016627	ZC3H6	99	70.355	Propithecus_coquereli
ENSOANG00000012054	-	67	79.412	ENSPVAG00000013728	ZC3H6	70	79.412	Pteropus_vampyrus
ENSOANG00000012054	-	62	70.312	ENSPNYG00000018130	zc3h6	82	49.547	Pundamilia_nyererei
ENSOANG00000012054	-	81	45.178	ENSPNAG00000009331	zc3h6	97	41.990	Pygocentrus_nattereri
ENSOANG00000012054	-	96	63.437	ENSRNOG00000026277	Zc3h6	99	62.679	Rattus_norvegicus
ENSOANG00000012054	-	96	70.658	ENSSBOG00000033489	ZC3H6	100	69.860	Saimiri_boliviensis_boliviensis
ENSOANG00000012054	-	85	77.131	ENSSHAG00000016634	ZC3H6	100	76.830	Sarcophilus_harrisii
ENSOANG00000012054	-	96	44.127	ENSSFOG00015004488	zc3h6	97	44.765	Scleropages_formosus
ENSOANG00000012054	-	62	69.634	ENSSMAG00000008411	zc3h6	98	40.174	Scophthalmus_maximus
ENSOANG00000012054	-	96	40.080	ENSSDUG00000006105	zc3h6	98	40.920	Seriola_dumerili
ENSOANG00000012054	-	96	39.809	ENSSLDG00000021813	zc3h6	98	40.905	Seriola_lalandi_dorsalis
ENSOANG00000012054	-	96	64.611	ENSSARG00000001035	ZC3H6	100	64.755	Sorex_araneus
ENSOANG00000012054	-	96	70.802	ENSSSCG00000008096	ZC3H6	100	73.684	Sus_scrofa
ENSOANG00000012054	-	96	72.087	ENSTGUG00000007468	ZC3H6	99	71.836	Taeniopygia_guttata
ENSOANG00000012054	-	96	40.997	ENSTRUG00000012901	zc3h6	97	41.100	Takifugu_rubripes
ENSOANG00000012054	-	94	41.285	ENSTNIG00000016608	zc3h6	99	42.115	Tetraodon_nigroviridis
ENSOANG00000012054	-	87	73.551	ENSTBEG00000016232	ZC3H6	91	72.101	Tupaia_belangeri
ENSOANG00000012054	-	74	81.373	ENSTTRG00000013154	ZC3H6	77	81.373	Tursiops_truncatus
ENSOANG00000012054	-	92	70.605	ENSUAMG00000002401	ZC3H6	100	70.301	Ursus_americanus
ENSOANG00000012054	-	85	78.112	ENSUMAG00000008663	ZC3H6	100	76.436	Ursus_maritimus
ENSOANG00000012054	-	96	69.620	ENSVPAG00000005912	ZC3H6	100	68.945	Vicugna_pacos
ENSOANG00000012054	-	92	69.424	ENSVVUG00000028662	ZC3H6	100	69.549	Vulpes_vulpes
ENSOANG00000012054	-	86	61.968	ENSXETG00000013762	zc3h6	93	62.396	Xenopus_tropicalis
ENSOANG00000012054	-	66	66.019	ENSXCOG00000011662	zc3h6	81	57.463	Xiphophorus_couchianus
ENSOANG00000012054	-	81	41.532	ENSXMAG00000020822	zc3h6	97	40.159	Xiphophorus_maculatus