EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOANG00000012118 (Gene tree)
Gene ID: -
Gene Symbol: USB1
Alias: -
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Minus strand
Length: 7973 bases
Position: chrUltra55:1768548-1776520
Accession: 25792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000019191	HVSL	PF09749.9	5.6e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000019194	USB1-201	1418	-	ENSOANP00000019191	239 (aa)	XP_001508138	F7F9N5

Gene Model

Click here to download ENSOANG00000012118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000012118's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000012118	USB1	94	73.778	ENSG00000103005	USB1	97	74.038	Homo_sapiens
ENSOANG00000012118	USB1	94	51.556	ENSAPOG00000011942	usb1	80	51.556	Acanthochromis_polyacanthus
ENSOANG00000012118	USB1	94	72.000	ENSAMEG00000017205	USB1	83	72.000	Ailuropoda_melanoleuca
ENSOANG00000012118	USB1	94	54.667	ENSACIG00000012234	usb1	82	54.667	Amphilophus_citrinellus
ENSOANG00000012118	USB1	94	52.000	ENSAOCG00000014831	usb1	79	52.000	Amphiprion_ocellaris
ENSOANG00000012118	USB1	94	52.444	ENSAPEG00000000296	usb1	79	52.444	Amphiprion_percula
ENSOANG00000012118	USB1	95	53.982	ENSATEG00000009348	usb1	80	53.982	Anabas_testudineus
ENSOANG00000012118	USB1	94	73.451	ENSAPLG00000002756	USB1	100	73.451	Anas_platyrhynchos
ENSOANG00000012118	USB1	95	64.758	ENSACAG00000015481	USB1	99	64.758	Anolis_carolinensis
ENSOANG00000012118	USB1	94	73.778	ENSANAG00000035640	USB1	85	73.778	Aotus_nancymaae
ENSOANG00000012118	USB1	94	53.333	ENSACLG00000020586	usb1	79	53.333	Astatotilapia_calliptera
ENSOANG00000012118	USB1	94	53.125	ENSAMXG00000040146	usb1	74	53.125	Astyanax_mexicanus
ENSOANG00000012118	USB1	97	70.213	ENSBTAG00000015758	USB1	88	70.213	Bos_taurus
ENSOANG00000012118	USB1	94	73.778	ENSCJAG00000011733	USB1	85	73.778	Callithrix_jacchus
ENSOANG00000012118	USB1	94	73.214	ENSCAFG00000008556	USB1	60	73.214	Canis_familiaris
ENSOANG00000012118	USB1	98	70.168	ENSCAFG00020009263	USB1	89	70.168	Canis_lupus_dingo
ENSOANG00000012118	USB1	97	69.362	ENSCHIG00000024290	USB1	88	69.362	Capra_hircus
ENSOANG00000012118	USB1	94	72.444	ENSTSYG00000006997	USB1	85	72.444	Carlito_syrichta
ENSOANG00000012118	USB1	94	60.000	ENSCAPG00000009057	USB1	96	60.000	Cavia_aperea
ENSOANG00000012118	USB1	94	72.889	ENSCPOG00000014325	USB1	83	72.889	Cavia_porcellus
ENSOANG00000012118	USB1	94	72.444	ENSCCAG00000022132	USB1	85	72.444	Cebus_capucinus
ENSOANG00000012118	USB1	97	73.077	ENSCATG00000032174	USB1	88	73.077	Cercocebus_atys
ENSOANG00000012118	USB1	74	70.455	ENSCLAG00000007363	USB1	100	70.455	Chinchilla_lanigera
ENSOANG00000012118	USB1	94	74.667	ENSCSAG00000004783	USB1	85	74.667	Chlorocebus_sabaeus
ENSOANG00000012118	USB1	95	70.354	ENSCPBG00000026943	USB1	81	70.354	Chrysemys_picta_bellii
ENSOANG00000012118	USB1	97	30.738	ENSCING00000011490	-	89	30.738	Ciona_intestinalis
ENSOANG00000012118	USB1	94	74.222	ENSCANG00000037135	USB1	85	74.222	Colobus_angolensis_palliatus
ENSOANG00000012118	USB1	94	72.889	ENSCGRG00001011243	USB1	84	72.889	Cricetulus_griseus_chok1gshd
ENSOANG00000012118	USB1	94	72.889	ENSCGRG00000013252	USB1	84	72.889	Cricetulus_griseus_crigri
ENSOANG00000012118	USB1	94	50.667	ENSCSEG00000013881	usb1	81	50.667	Cynoglossus_semilaevis
ENSOANG00000012118	USB1	94	48.684	ENSCVAG00000009252	usb1	97	48.684	Cyprinodon_variegatus
ENSOANG00000012118	USB1	95	50.442	ENSDARG00000003841	usb1	82	50.442	Danio_rerio
ENSOANG00000012118	USB1	97	67.949	ENSDORG00000001888	Usb1	88	67.949	Dipodomys_ordii
ENSOANG00000012118	USB1	95	37.826	FBgn0037713	CG16790	83	37.826	Drosophila_melanogaster
ENSOANG00000012118	USB1	95	59.825	ENSETEG00000019682	USB1	85	59.825	Echinops_telfairi
ENSOANG00000012118	USB1	97	50.000	ENSEBUG00000005889	usb1	81	50.000	Eptatretus_burgeri
ENSOANG00000012118	USB1	94	74.222	ENSEASG00005005484	USB1	85	74.222	Equus_asinus_asinus
ENSOANG00000012118	USB1	94	73.778	ENSECAG00000019493	USB1	77	73.778	Equus_caballus
ENSOANG00000012118	USB1	74	63.068	ENSEEUG00000000154	USB1	66	63.068	Erinaceus_europaeus
ENSOANG00000012118	USB1	95	49.130	ENSELUG00000010974	usb1	84	49.130	Esox_lucius
ENSOANG00000012118	USB1	97	72.650	ENSFCAG00000002693	USB1	87	72.650	Felis_catus
ENSOANG00000012118	USB1	96	69.264	ENSFALG00000006876	USB1	86	69.264	Ficedula_albicollis
ENSOANG00000012118	USB1	94	72.444	ENSFDAG00000010052	USB1	84	72.444	Fukomys_damarensis
ENSOANG00000012118	USB1	80	53.927	ENSFHEG00000012334	usb1	76	53.927	Fundulus_heteroclitus
ENSOANG00000012118	USB1	94	50.000	ENSGMOG00000004228	usb1	99	50.000	Gadus_morhua
ENSOANG00000012118	USB1	94	71.875	ENSGALG00000035604	USB1	90	70.870	Gallus_gallus
ENSOANG00000012118	USB1	94	51.111	ENSGAFG00000021890	usb1	81	51.111	Gambusia_affinis
ENSOANG00000012118	USB1	94	51.111	ENSGACG00000003257	usb1	81	51.111	Gasterosteus_aculeatus
ENSOANG00000012118	USB1	95	70.354	ENSGAGG00000022572	USB1	82	70.354	Gopherus_agassizii
ENSOANG00000012118	USB1	94	73.333	ENSGGOG00000017147	USB1	85	73.333	Gorilla_gorilla
ENSOANG00000012118	USB1	94	53.778	ENSHBUG00000009823	usb1	80	53.778	Haplochromis_burtoni
ENSOANG00000012118	USB1	94	71.556	ENSHGLG00000016078	USB1	82	71.556	Heterocephalus_glaber_female
ENSOANG00000012118	USB1	94	71.556	ENSHGLG00100005562	USB1	82	71.556	Heterocephalus_glaber_male
ENSOANG00000012118	USB1	91	51.376	ENSHCOG00000015633	usb1	86	51.786	Hippocampus_comes
ENSOANG00000012118	USB1	94	53.333	ENSIPUG00000008601	usb1	78	53.333	Ictalurus_punctatus
ENSOANG00000012118	USB1	94	72.889	ENSSTOG00000007548	USB1	82	72.889	Ictidomys_tridecemlineatus
ENSOANG00000012118	USB1	94	72.444	ENSJJAG00000021859	Usb1	84	72.444	Jaculus_jaculus
ENSOANG00000012118	USB1	94	51.556	ENSKMAG00000007200	usb1	79	51.556	Kryptolebias_marmoratus
ENSOANG00000012118	USB1	83	51.244	ENSLBEG00000008452	usb1	64	52.332	Labrus_bergylta
ENSOANG00000012118	USB1	80	65.625	ENSLACG00000000105	USB1	66	65.625	Latimeria_chalumnae
ENSOANG00000012118	USB1	94	56.140	ENSLOCG00000000465	usb1	79	56.140	Lepisosteus_oculatus
ENSOANG00000012118	USB1	94	59.052	ENSLAFG00000002267	USB1	83	59.483	Loxodonta_africana
ENSOANG00000012118	USB1	94	74.667	ENSMFAG00000003926	USB1	85	74.667	Macaca_fascicularis
ENSOANG00000012118	USB1	94	74.667	ENSMMUG00000022669	USB1	85	74.667	Macaca_mulatta
ENSOANG00000012118	USB1	94	74.222	ENSMNEG00000042487	USB1	85	74.222	Macaca_nemestrina
ENSOANG00000012118	USB1	94	74.667	ENSMLEG00000028756	USB1	85	74.667	Mandrillus_leucophaeus
ENSOANG00000012118	USB1	94	52.444	ENSMAMG00000015092	usb1	80	52.444	Mastacembelus_armatus
ENSOANG00000012118	USB1	94	53.333	ENSMZEG00005010008	usb1	80	53.333	Maylandia_zebra
ENSOANG00000012118	USB1	94	71.111	ENSMAUG00000007832	Usb1	84	71.111	Mesocricetus_auratus
ENSOANG00000012118	USB1	94	73.333	ENSMICG00000004900	USB1	85	73.333	Microcebus_murinus
ENSOANG00000012118	USB1	94	72.000	ENSMOCG00000022647	Usb1	84	72.000	Microtus_ochrogaster
ENSOANG00000012118	USB1	94	52.889	ENSMMOG00000000490	usb1	87	52.889	Mola_mola
ENSOANG00000012118	USB1	92	73.059	ENSMODG00000014067	USB1	84	73.128	Monodelphis_domestica
ENSOANG00000012118	USB1	94	54.222	ENSMALG00000005930	usb1	79	54.222	Monopterus_albus
ENSOANG00000012118	USB1	94	71.111	MGP_CAROLIEiJ_G0031421	Usb1	95	71.963	Mus_caroli
ENSOANG00000012118	USB1	94	71.111	ENSMUSG00000031792	Usb1	100	70.175	Mus_musculus
ENSOANG00000012118	USB1	94	72.000	MGP_PahariEiJ_G0023019	Usb1	100	72.034	Mus_pahari
ENSOANG00000012118	USB1	94	70.667	MGP_SPRETEiJ_G0032540	Usb1	84	70.667	Mus_spretus
ENSOANG00000012118	USB1	97	70.940	ENSMPUG00000004684	USB1	83	70.940	Mustela_putorius_furo
ENSOANG00000012118	USB1	94	75.111	ENSMLUG00000007400	USB1	97	75.111	Myotis_lucifugus
ENSOANG00000012118	USB1	94	71.111	ENSNGAG00000009703	Usb1	83	71.111	Nannospalax_galili
ENSOANG00000012118	USB1	94	49.333	ENSNBRG00000008747	usb1	99	52.558	Neolamprologus_brichardi
ENSOANG00000012118	USB1	90	71.689	ENSNLEG00000003340	USB1	87	71.689	Nomascus_leucogenys
ENSOANG00000012118	USB1	67	66.142	ENSOPRG00000011803	USB1	69	66.142	Ochotona_princeps
ENSOANG00000012118	USB1	94	70.222	ENSODEG00000016214	USB1	84	70.222	Octodon_degus
ENSOANG00000012118	USB1	94	53.778	ENSONIG00000011063	usb1	80	53.778	Oreochromis_niloticus
ENSOANG00000012118	USB1	97	49.785	ENSORLG00000012479	usb1	85	49.785	Oryzias_latipes
ENSOANG00000012118	USB1	97	49.785	ENSORLG00020018671	usb1	85	49.785	Oryzias_latipes_hni
ENSOANG00000012118	USB1	97	49.785	ENSORLG00015009679	usb1	86	49.785	Oryzias_latipes_hsok
ENSOANG00000012118	USB1	100	48.117	ENSOMEG00000012930	usb1	86	48.117	Oryzias_melastigma
ENSOANG00000012118	USB1	94	67.111	ENSOGAG00000003273	USB1	83	67.111	Otolemur_garnettii
ENSOANG00000012118	USB1	97	69.787	ENSOARG00000001107	USB1	90	69.787	Ovis_aries
ENSOANG00000012118	USB1	94	73.778	ENSPPAG00000042137	USB1	85	73.778	Pan_paniscus
ENSOANG00000012118	USB1	97	71.795	ENSPPRG00000024797	USB1	87	71.795	Panthera_pardus
ENSOANG00000012118	USB1	97	71.368	ENSPTIG00000007506	USB1	87	71.368	Panthera_tigris_altaica
ENSOANG00000012118	USB1	94	68.444	ENSPTRG00000008172	USB1	97	74.519	Pan_troglodytes
ENSOANG00000012118	USB1	94	74.667	ENSPANG00000025138	USB1	85	74.667	Papio_anubis
ENSOANG00000012118	USB1	94	51.111	ENSPKIG00000015109	usb1	75	51.111	Paramormyrops_kingsleyae
ENSOANG00000012118	USB1	94	54.622	ENSPSIG00000004305	USB1	100	54.622	Pelodiscus_sinensis
ENSOANG00000012118	USB1	94	51.786	ENSPMGG00000017725	usb1	85	51.786	Periophthalmus_magnuspinnatus
ENSOANG00000012118	USB1	94	71.111	ENSPEMG00000016183	Usb1	82	71.111	Peromyscus_maniculatus_bairdii
ENSOANG00000012118	USB1	97	50.638	ENSPMAG00000000462	usb1	99	50.638	Petromyzon_marinus
ENSOANG00000012118	USB1	94	51.556	ENSPFOG00000011130	usb1	81	51.556	Poecilia_formosa
ENSOANG00000012118	USB1	94	51.111	ENSPLAG00000009820	usb1	81	51.111	Poecilia_latipinna
ENSOANG00000012118	USB1	94	51.556	ENSPMEG00000006402	usb1	81	51.556	Poecilia_mexicana
ENSOANG00000012118	USB1	80	53.927	ENSPREG00000001047	usb1	77	53.927	Poecilia_reticulata
ENSOANG00000012118	USB1	88	69.340	ENSPPYG00000007401	USB1	84	69.340	Pongo_abelii
ENSOANG00000012118	USB1	94	72.889	ENSPCOG00000022612	USB1	85	72.889	Propithecus_coquereli
ENSOANG00000012118	USB1	94	69.333	ENSPVAG00000004613	USB1	86	69.333	Pteropus_vampyrus
ENSOANG00000012118	USB1	94	53.778	ENSPNYG00000022262	usb1	80	53.778	Pundamilia_nyererei
ENSOANG00000012118	USB1	95	53.097	ENSPNAG00000011736	usb1	77	53.097	Pygocentrus_nattereri
ENSOANG00000012118	USB1	94	70.667	ENSRNOG00000013216	Usb1	84	70.667	Rattus_norvegicus
ENSOANG00000012118	USB1	94	68.889	ENSRBIG00000044466	USB1	97	75.000	Rhinopithecus_bieti
ENSOANG00000012118	USB1	94	74.667	ENSRROG00000029211	USB1	85	74.667	Rhinopithecus_roxellana
ENSOANG00000012118	USB1	94	73.333	ENSSBOG00000029362	USB1	85	73.333	Saimiri_boliviensis_boliviensis
ENSOANG00000012118	USB1	92	74.091	ENSSHAG00000006993	USB1	91	73.593	Sarcophilus_harrisii
ENSOANG00000012118	USB1	94	56.250	ENSSFOG00015023663	usb1	70	56.250	Scleropages_formosus
ENSOANG00000012118	USB1	94	52.720	ENSSMAG00000015834	usb1	80	52.720	Scophthalmus_maximus
ENSOANG00000012118	USB1	94	55.111	ENSSDUG00000002949	usb1	83	55.111	Seriola_dumerili
ENSOANG00000012118	USB1	94	55.111	ENSSLDG00000014174	usb1	80	55.111	Seriola_lalandi_dorsalis
ENSOANG00000012118	USB1	90	70.233	ENSSPUG00000006741	USB1	100	70.233	Sphenodon_punctatus
ENSOANG00000012118	USB1	94	52.889	ENSSPAG00000007484	usb1	79	52.889	Stegastes_partitus
ENSOANG00000012118	USB1	97	69.362	ENSSSCG00000002807	USB1	87	69.362	Sus_scrofa
ENSOANG00000012118	USB1	89	73.239	ENSTGUG00000004792	USB1	89	69.697	Taeniopygia_guttata
ENSOANG00000012118	USB1	94	52.889	ENSTRUG00000021069	usb1	83	52.889	Takifugu_rubripes
ENSOANG00000012118	USB1	94	48.000	ENSTNIG00000000626	usb1	83	48.000	Tetraodon_nigroviridis
ENSOANG00000012118	USB1	96	48.927	ENSTBEG00000001507	USB1	100	48.927	Tupaia_belangeri
ENSOANG00000012118	USB1	94	72.444	ENSUAMG00000016823	USB1	87	70.513	Ursus_americanus
ENSOANG00000012118	USB1	90	71.628	ENSUMAG00000021369	USB1	100	71.628	Ursus_maritimus
ENSOANG00000012118	USB1	50	70.000	ENSVPAG00000009834	-	59	70.000	Vicugna_pacos
ENSOANG00000012118	USB1	97	71.368	ENSVVUG00000023700	USB1	86	73.661	Vulpes_vulpes
ENSOANG00000012118	USB1	91	55.505	ENSXETG00000013795	usb1	90	55.556	Xenopus_tropicalis
ENSOANG00000012118	USB1	94	51.556	ENSXMAG00000024687	usb1	67	51.961	Xiphophorus_maculatus