EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOANG00000014536 (Gene tree)
Gene ID: -
Gene Symbol: LSM8
Alias: -
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Ornithorhynchus_anatinus
Status: putative
Strand: Minus strand
Length: 9302 bases
Position: chrUltra479:1676081-1685382
Accession: 20471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOANP00000022902	LSM	PF01423.22	4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOANT00000022906	LSM8-201	2878	-	ENSOANP00000022902	96 (aa)	XP_001516404	F6Q0T3

Gene Model

Click here to download ENSOANG00000014536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOANG00000014536's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOANG00000014536	LSM8	83	36.585	ENSOANG00000003256	LSM1	61	36.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOANG00000014536	LSM8	100	98.958	ENSG00000128534	LSM8	100	100.000	Homo_sapiens
ENSOANG00000014536	LSM8	100	91.667	ENSAPOG00000008649	lsm8	100	91.667	Acanthochromis_polyacanthus
ENSOANG00000014536	LSM8	100	98.958	ENSAMEG00000001162	LSM8	100	98.958	Ailuropoda_melanoleuca
ENSOANG00000014536	LSM8	78	97.333	ENSACIG00000014694	lsm8	100	97.333	Amphilophus_citrinellus
ENSOANG00000014536	LSM8	100	91.667	ENSAOCG00000013926	lsm8	100	91.667	Amphiprion_ocellaris
ENSOANG00000014536	LSM8	100	91.667	ENSAPEG00000023502	lsm8	100	91.667	Amphiprion_percula
ENSOANG00000014536	LSM8	78	97.333	ENSATEG00000023432	lsm8	100	97.333	Anabas_testudineus
ENSOANG00000014536	LSM8	95	92.553	ENSAPLG00000005115	LSM8	95	92.553	Anas_platyrhynchos
ENSOANG00000014536	LSM8	100	98.958	ENSANAG00000027771	LSM8	100	98.958	Aotus_nancymaae
ENSOANG00000014536	LSM8	100	91.667	ENSACLG00000011253	lsm8	100	91.667	Astatotilapia_calliptera
ENSOANG00000014536	LSM8	100	93.750	ENSAMXG00000042902	lsm8	100	93.750	Astyanax_mexicanus
ENSOANG00000014536	LSM8	100	98.958	ENSBTAG00000012649	LSM8	100	98.958	Bos_taurus
ENSOANG00000014536	LSM8	98	57.447	WBGene00003082	lsm-8	96	57.447	Caenorhabditis_elegans
ENSOANG00000014536	LSM8	100	98.958	ENSCJAG00000046406	LSM8	100	98.958	Callithrix_jacchus
ENSOANG00000014536	LSM8	99	98.947	ENSCAFG00000016459	LSM8	96	98.947	Canis_familiaris
ENSOANG00000014536	LSM8	89	97.647	ENSCAFG00020012800	-	66	97.647	Canis_lupus_dingo
ENSOANG00000014536	LSM8	100	98.958	ENSCAFG00020007643	-	100	98.958	Canis_lupus_dingo
ENSOANG00000014536	LSM8	89	100.000	ENSCHIG00000014201	LSM8	90	100.000	Capra_hircus
ENSOANG00000014536	LSM8	100	98.958	ENSTSYG00000032434	LSM8	100	98.958	Carlito_syrichta
ENSOANG00000014536	LSM8	77	98.649	ENSCAPG00000008253	LSM8	100	98.649	Cavia_aperea
ENSOANG00000014536	LSM8	100	98.958	ENSCPOG00000035673	LSM8	100	98.958	Cavia_porcellus
ENSOANG00000014536	LSM8	100	98.958	ENSCCAG00000021329	LSM8	100	98.958	Cebus_capucinus
ENSOANG00000014536	LSM8	100	98.958	ENSCATG00000045302	LSM8	100	98.958	Cercocebus_atys
ENSOANG00000014536	LSM8	100	98.958	ENSCLAG00000003726	LSM8	100	98.958	Chinchilla_lanigera
ENSOANG00000014536	LSM8	100	94.792	ENSCSAG00000019007	-	100	94.792	Chlorocebus_sabaeus
ENSOANG00000014536	LSM8	100	98.958	ENSCSAG00000010802	-	100	98.958	Chlorocebus_sabaeus
ENSOANG00000014536	LSM8	89	100.000	ENSCPBG00000008154	LSM8	87	100.000	Chrysemys_picta_bellii
ENSOANG00000014536	LSM8	100	75.000	ENSCING00000024877	-	100	75.000	Ciona_intestinalis
ENSOANG00000014536	LSM8	100	98.958	ENSCANG00000040728	LSM8	100	98.958	Colobus_angolensis_palliatus
ENSOANG00000014536	LSM8	100	98.958	ENSCGRG00001000450	Lsm8	100	98.958	Cricetulus_griseus_chok1gshd
ENSOANG00000014536	LSM8	89	100.000	ENSCGRG00000005587	Lsm8	100	100.000	Cricetulus_griseus_crigri
ENSOANG00000014536	LSM8	100	80.208	ENSCSEG00000004164	lsm8	100	80.208	Cynoglossus_semilaevis
ENSOANG00000014536	LSM8	100	90.625	ENSCVAG00000020547	lsm8	100	90.625	Cyprinodon_variegatus
ENSOANG00000014536	LSM8	100	90.625	ENSDARG00000091656	lsm8	100	90.625	Danio_rerio
ENSOANG00000014536	LSM8	100	98.958	ENSDNOG00000034613	LSM8	100	98.958	Dasypus_novemcinctus
ENSOANG00000014536	LSM8	100	98.958	ENSDORG00000027868	Lsm8	100	98.958	Dipodomys_ordii
ENSOANG00000014536	LSM8	98	68.085	FBgn0035271	CG2021	99	68.085	Drosophila_melanogaster
ENSOANG00000014536	LSM8	100	97.917	ENSETEG00000011594	LSM8	100	97.917	Echinops_telfairi
ENSOANG00000014536	LSM8	77	91.892	ENSEBUG00000012017	lsm8	100	91.892	Eptatretus_burgeri
ENSOANG00000014536	LSM8	100	98.958	ENSEASG00005008932	LSM8	62	98.958	Equus_asinus_asinus
ENSOANG00000014536	LSM8	89	100.000	ENSECAG00000024025	LSM8	77	100.000	Equus_caballus
ENSOANG00000014536	LSM8	100	90.625	ENSELUG00000010138	lsm8	100	90.625	Esox_lucius
ENSOANG00000014536	LSM8	85	73.171	ENSFCAG00000044794	-	83	73.171	Felis_catus
ENSOANG00000014536	LSM8	100	98.958	ENSFCAG00000036620	-	100	98.958	Felis_catus
ENSOANG00000014536	LSM8	100	97.917	ENSFALG00000010023	LSM8	100	97.917	Ficedula_albicollis
ENSOANG00000014536	LSM8	100	98.958	ENSFDAG00000019530	LSM8	100	98.958	Fukomys_damarensis
ENSOANG00000014536	LSM8	100	91.667	ENSFHEG00000013729	lsm8	100	91.667	Fundulus_heteroclitus
ENSOANG00000014536	LSM8	100	97.917	ENSGALG00000009110	LSM8	100	97.917	Gallus_gallus
ENSOANG00000014536	LSM8	100	90.625	ENSGAFG00000001135	lsm8	100	90.625	Gambusia_affinis
ENSOANG00000014536	LSM8	100	98.958	ENSGAGG00000017366	LSM8	100	98.958	Gopherus_agassizii
ENSOANG00000014536	LSM8	100	98.958	ENSGGOG00000041883	LSM8	100	98.958	Gorilla_gorilla
ENSOANG00000014536	LSM8	100	91.667	ENSHBUG00000003646	lsm8	100	91.667	Haplochromis_burtoni
ENSOANG00000014536	LSM8	71	98.529	ENSHGLG00000001988	-	99	98.529	Heterocephalus_glaber_female
ENSOANG00000014536	LSM8	100	92.708	ENSHGLG00000019782	-	100	92.708	Heterocephalus_glaber_female
ENSOANG00000014536	LSM8	100	94.792	ENSHGLG00100012166	-	100	94.792	Heterocephalus_glaber_male
ENSOANG00000014536	LSM8	99	95.789	ENSHGLG00100003934	-	95	95.789	Heterocephalus_glaber_male
ENSOANG00000014536	LSM8	100	90.625	ENSHCOG00000005037	lsm8	100	90.625	Hippocampus_comes
ENSOANG00000014536	LSM8	100	93.750	ENSIPUG00000019811	NAA38	100	93.750	Ictalurus_punctatus
ENSOANG00000014536	LSM8	100	98.958	ENSSTOG00000009039	LSM8	100	98.958	Ictidomys_tridecemlineatus
ENSOANG00000014536	LSM8	92	87.500	ENSSTOG00000034801	-	81	87.500	Ictidomys_tridecemlineatus
ENSOANG00000014536	LSM8	100	98.958	ENSJJAG00000009031	Lsm8	99	98.958	Jaculus_jaculus
ENSOANG00000014536	LSM8	100	91.667	ENSKMAG00000018983	lsm8	100	91.667	Kryptolebias_marmoratus
ENSOANG00000014536	LSM8	100	93.750	ENSLACG00000010231	LSM8	100	93.750	Latimeria_chalumnae
ENSOANG00000014536	LSM8	100	92.708	ENSLOCG00000015580	lsm8	100	92.708	Lepisosteus_oculatus
ENSOANG00000014536	LSM8	100	97.938	ENSLAFG00000011242	LSM8	100	97.938	Loxodonta_africana
ENSOANG00000014536	LSM8	100	94.792	ENSMFAG00000013044	-	100	94.792	Macaca_fascicularis
ENSOANG00000014536	LSM8	100	98.958	ENSMFAG00000035798	LSM8	100	98.958	Macaca_fascicularis
ENSOANG00000014536	LSM8	100	98.958	ENSMMUG00000046401	LSM8	100	97.297	Macaca_mulatta
ENSOANG00000014536	LSM8	100	98.958	ENSMNEG00000036764	-	100	98.958	Macaca_nemestrina
ENSOANG00000014536	LSM8	78	96.000	ENSMNEG00000011141	-	100	96.000	Macaca_nemestrina
ENSOANG00000014536	LSM8	100	83.333	ENSMLEG00000039324	-	100	83.333	Mandrillus_leucophaeus
ENSOANG00000014536	LSM8	100	98.958	ENSMLEG00000035828	-	100	98.958	Mandrillus_leucophaeus
ENSOANG00000014536	LSM8	78	97.333	ENSMAMG00000018839	lsm8	100	97.333	Mastacembelus_armatus
ENSOANG00000014536	LSM8	100	91.667	ENSMZEG00005019138	lsm8	100	91.667	Maylandia_zebra
ENSOANG00000014536	LSM8	100	97.917	ENSMGAG00000008808	LSM8	100	97.917	Meleagris_gallopavo
ENSOANG00000014536	LSM8	100	91.667	ENSMAUG00000015721	-	100	91.667	Mesocricetus_auratus
ENSOANG00000014536	LSM8	75	93.056	ENSMAUG00000020287	-	100	90.541	Mesocricetus_auratus
ENSOANG00000014536	LSM8	100	79.167	ENSMAUG00000015356	-	100	79.167	Mesocricetus_auratus
ENSOANG00000014536	LSM8	100	98.958	ENSMICG00000042730	LSM8	100	98.958	Microcebus_murinus
ENSOANG00000014536	LSM8	100	98.958	ENSMOCG00000001688	Lsm8	100	98.958	Microtus_ochrogaster
ENSOANG00000014536	LSM8	78	97.333	ENSMMOG00000006046	lsm8	100	97.333	Mola_mola
ENSOANG00000014536	LSM8	76	86.667	ENSMODG00000015729	LSM8	96	86.667	Monodelphis_domestica
ENSOANG00000014536	LSM8	100	92.708	ENSMALG00000000405	lsm8	100	92.708	Monopterus_albus
ENSOANG00000014536	LSM8	100	98.958	MGP_CAROLIEiJ_G0028125	-	100	98.958	Mus_caroli
ENSOANG00000014536	LSM8	100	98.958	ENSMUSG00000044155	Lsm8	100	98.958	Mus_musculus
ENSOANG00000014536	LSM8	100	98.958	MGP_PahariEiJ_G0021881	Lsm8	100	100.000	Mus_pahari
ENSOANG00000014536	LSM8	100	98.958	MGP_SPRETEiJ_G0029125	-	100	98.958	Mus_spretus
ENSOANG00000014536	LSM8	100	98.958	ENSMLUG00000006837	-	100	98.958	Myotis_lucifugus
ENSOANG00000014536	LSM8	100	97.917	ENSMLUG00000027762	-	100	97.917	Myotis_lucifugus
ENSOANG00000014536	LSM8	100	98.958	ENSNGAG00000016554	Lsm8	100	98.958	Nannospalax_galili
ENSOANG00000014536	LSM8	100	91.667	ENSNBRG00000014441	lsm8	100	91.667	Neolamprologus_brichardi
ENSOANG00000014536	LSM8	100	98.958	ENSNLEG00000011768	LSM8	100	98.958	Nomascus_leucogenys
ENSOANG00000014536	LSM8	100	87.500	ENSMEUG00000007801	LSM8	100	87.500	Notamacropus_eugenii
ENSOANG00000014536	LSM8	89	100.000	ENSOPRG00000014809	LSM8	100	100.000	Ochotona_princeps
ENSOANG00000014536	LSM8	90	81.395	ENSODEG00000020290	-	100	81.395	Octodon_degus
ENSOANG00000014536	LSM8	100	98.958	ENSODEG00000000418	-	100	98.958	Octodon_degus
ENSOANG00000014536	LSM8	100	97.938	ENSOCUG00000017359	LSM8	100	97.938	Oryctolagus_cuniculus
ENSOANG00000014536	LSM8	100	81.250	ENSORLG00000017432	lsm8	100	81.250	Oryzias_latipes
ENSOANG00000014536	LSM8	100	81.250	ENSORLG00020004376	lsm8	100	81.250	Oryzias_latipes_hni
ENSOANG00000014536	LSM8	100	91.667	ENSORLG00015003757	lsm8	100	91.667	Oryzias_latipes_hsok
ENSOANG00000014536	LSM8	100	79.167	ENSOMEG00000022509	lsm8	100	80.208	Oryzias_melastigma
ENSOANG00000014536	LSM8	100	98.958	ENSOGAG00000013377	LSM8	100	98.958	Otolemur_garnettii
ENSOANG00000014536	LSM8	100	98.958	ENSOARG00000017974	LSM8	100	98.958	Ovis_aries
ENSOANG00000014536	LSM8	78	100.000	ENSPPAG00000043228	-	100	100.000	Pan_paniscus
ENSOANG00000014536	LSM8	100	98.958	ENSPPRG00000006444	LSM8	100	98.958	Panthera_pardus
ENSOANG00000014536	LSM8	100	98.958	ENSPTIG00000004722	LSM8	100	98.958	Panthera_tigris_altaica
ENSOANG00000014536	LSM8	78	100.000	ENSPTRG00000046596	-	100	100.000	Pan_troglodytes
ENSOANG00000014536	LSM8	100	92.708	ENSPANG00000019395	-	100	92.708	Papio_anubis
ENSOANG00000014536	LSM8	100	98.958	ENSPANG00000035470	-	100	98.958	Papio_anubis
ENSOANG00000014536	LSM8	89	97.647	ENSPKIG00000006092	lsm8	86	97.647	Paramormyrops_kingsleyae
ENSOANG00000014536	LSM8	78	100.000	ENSPSIG00000017054	LSM8	100	100.000	Pelodiscus_sinensis
ENSOANG00000014536	LSM8	78	97.333	ENSPMGG00000016442	lsm8	100	97.333	Periophthalmus_magnuspinnatus
ENSOANG00000014536	LSM8	77	97.297	ENSPEMG00000009153	Lsm8	100	97.297	Peromyscus_maniculatus_bairdii
ENSOANG00000014536	LSM8	97	98.925	ENSPCIG00000021467	LSM8	98	98.925	Phascolarctos_cinereus
ENSOANG00000014536	LSM8	100	90.625	ENSPFOG00000012340	lsm8	100	90.625	Poecilia_formosa
ENSOANG00000014536	LSM8	89	94.118	ENSPLAG00000000516	lsm8	89	94.118	Poecilia_latipinna
ENSOANG00000014536	LSM8	100	90.625	ENSPMEG00000022567	lsm8	100	90.625	Poecilia_mexicana
ENSOANG00000014536	LSM8	76	85.000	ENSPREG00000005527	lsm8	72	85.000	Poecilia_reticulata
ENSOANG00000014536	LSM8	100	98.958	ENSPPYG00000017942	LSM8	100	98.958	Pongo_abelii
ENSOANG00000014536	LSM8	100	98.958	ENSPCOG00000003309	-	100	98.958	Propithecus_coquereli
ENSOANG00000014536	LSM8	99	76.842	ENSPCOG00000017982	-	99	76.842	Propithecus_coquereli
ENSOANG00000014536	LSM8	89	98.824	ENSPVAG00000000990	LSM8	100	98.824	Pteropus_vampyrus
ENSOANG00000014536	LSM8	100	91.667	ENSPNYG00000011448	lsm8	100	91.667	Pundamilia_nyererei
ENSOANG00000014536	LSM8	100	93.750	ENSPNAG00000010252	lsm8	100	93.750	Pygocentrus_nattereri
ENSOANG00000014536	LSM8	100	98.958	ENSRNOG00000058677	Lsm8	100	98.958	Rattus_norvegicus
ENSOANG00000014536	LSM8	100	98.958	ENSRBIG00000032851	LSM8	100	98.958	Rhinopithecus_bieti
ENSOANG00000014536	LSM8	100	98.958	ENSRROG00000039618	LSM8	100	98.958	Rhinopithecus_roxellana
ENSOANG00000014536	LSM8	100	98.958	ENSSBOG00000023223	LSM8	100	98.958	Saimiri_boliviensis_boliviensis
ENSOANG00000014536	LSM8	100	98.958	ENSSHAG00000018435	-	100	98.958	Sarcophilus_harrisii
ENSOANG00000014536	LSM8	100	90.625	ENSSFOG00015004412	lsm8	100	90.625	Scleropages_formosus
ENSOANG00000014536	LSM8	78	97.333	ENSSMAG00000009458	lsm8	100	97.333	Scophthalmus_maximus
ENSOANG00000014536	LSM8	100	91.667	ENSSDUG00000014702	lsm8	100	91.667	Seriola_dumerili
ENSOANG00000014536	LSM8	78	97.333	ENSSLDG00000016870	lsm8	100	97.333	Seriola_lalandi_dorsalis
ENSOANG00000014536	LSM8	75	100.000	ENSSARG00000009628	-	100	100.000	Sorex_araneus
ENSOANG00000014536	LSM8	100	98.958	ENSSPUG00000017419	LSM8	100	98.958	Sphenodon_punctatus
ENSOANG00000014536	LSM8	100	91.667	ENSSPAG00000021422	lsm8	100	91.667	Stegastes_partitus
ENSOANG00000014536	LSM8	100	98.958	ENSSSCG00000021652	LSM8	100	98.958	Sus_scrofa
ENSOANG00000014536	LSM8	100	96.875	ENSTGUG00000004730	-	100	96.875	Taeniopygia_guttata
ENSOANG00000014536	LSM8	100	95.833	ENSTGUG00000016823	-	100	95.833	Taeniopygia_guttata
ENSOANG00000014536	LSM8	100	91.667	ENSTRUG00000025192	lsm8	100	91.667	Takifugu_rubripes
ENSOANG00000014536	LSM8	100	91.667	ENSTNIG00000002864	lsm8	100	91.667	Tetraodon_nigroviridis
ENSOANG00000014536	LSM8	100	98.958	ENSTTRG00000001023	LSM8	100	98.958	Tursiops_truncatus
ENSOANG00000014536	LSM8	92	96.591	ENSUAMG00000006943	-	92	96.591	Ursus_americanus
ENSOANG00000014536	LSM8	92	96.591	ENSUMAG00000003073	LSM8	94	96.591	Ursus_maritimus
ENSOANG00000014536	LSM8	100	98.958	ENSVPAG00000001530	LSM8	100	98.958	Vicugna_pacos
ENSOANG00000014536	LSM8	78	97.333	ENSVVUG00000013248	-	82	97.333	Vulpes_vulpes
ENSOANG00000014536	LSM8	93	95.506	ENSXETG00000021829	lsm8	92	95.506	Xenopus_tropicalis
ENSOANG00000014536	LSM8	100	88.542	ENSXCOG00000012938	lsm8	100	88.542	Xiphophorus_couchianus
ENSOANG00000014536	LSM8	100	90.625	ENSXMAG00000025919	lsm8	100	90.625	Xiphophorus_maculatus