EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000001107 (Gene tree)
Gene ID: -
Gene Symbol: USB1
Alias: -
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 14065 bases
Position: chr14:25336001-25350065
Accession: 101121962
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000001148	HVSL	PF09749.9	1.6e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000001184	USB1-201	786	XM_004015567	ENSOARP00000001148	261 (aa)	-	W5NSK8

Gene Model

Click here to download ENSOARG00000001107's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000001107's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000001107	USB1	93	83.128	ENSG00000103005	USB1	100	85.047	Homo_sapiens
ENSOARG00000001107	USB1	91	50.420	ENSAPOG00000011942	usb1	85	50.420	Acanthochromis_polyacanthus
ENSOARG00000001107	USB1	92	85.833	ENSAMEG00000017205	USB1	92	84.615	Ailuropoda_melanoleuca
ENSOARG00000001107	USB1	86	54.018	ENSACIG00000012234	usb1	82	54.018	Amphilophus_citrinellus
ENSOARG00000001107	USB1	91	51.681	ENSAOCG00000014831	usb1	84	51.681	Amphiprion_ocellaris
ENSOARG00000001107	USB1	91	51.261	ENSAPEG00000000296	usb1	84	51.261	Amphiprion_percula
ENSOARG00000001107	USB1	91	52.101	ENSATEG00000009348	usb1	84	52.101	Anabas_testudineus
ENSOARG00000001107	USB1	86	69.027	ENSAPLG00000002756	USB1	100	69.027	Anas_platyrhynchos
ENSOARG00000001107	USB1	87	62.882	ENSACAG00000015481	USB1	100	62.882	Anolis_carolinensis
ENSOARG00000001107	USB1	93	82.716	ENSANAG00000035640	USB1	95	80.632	Aotus_nancymaae
ENSOARG00000001107	USB1	93	51.440	ENSACLG00000020586	usb1	84	51.440	Astatotilapia_calliptera
ENSOARG00000001107	USB1	85	52.466	ENSAMXG00000040146	usb1	74	52.466	Astyanax_mexicanus
ENSOARG00000001107	USB1	97	94.862	ENSBTAG00000015758	USB1	95	94.862	Bos_taurus
ENSOARG00000001107	USB1	93	85.185	ENSCJAG00000011733	USB1	95	83.004	Callithrix_jacchus
ENSOARG00000001107	USB1	89	86.638	ENSCAFG00000008556	USB1	66	84.490	Canis_familiaris
ENSOARG00000001107	USB1	89	86.580	ENSCAFG00020009263	USB1	87	86.580	Canis_lupus_dingo
ENSOARG00000001107	USB1	97	96.443	ENSCHIG00000024290	USB1	95	96.443	Capra_hircus
ENSOARG00000001107	USB1	94	83.333	ENSTSYG00000006997	USB1	95	81.818	Carlito_syrichta
ENSOARG00000001107	USB1	89	70.690	ENSCAPG00000009057	USB1	100	70.690	Cavia_aperea
ENSOARG00000001107	USB1	96	81.275	ENSCPOG00000014325	USB1	94	81.275	Cavia_porcellus
ENSOARG00000001107	USB1	93	83.539	ENSCCAG00000022132	USB1	95	81.423	Cebus_capucinus
ENSOARG00000001107	USB1	93	84.774	ENSCATG00000032174	USB1	95	82.609	Cercocebus_atys
ENSOARG00000001107	USB1	67	87.500	ENSCLAG00000007363	USB1	100	87.500	Chinchilla_lanigera
ENSOARG00000001107	USB1	93	84.774	ENSCSAG00000004783	USB1	95	82.609	Chlorocebus_sabaeus
ENSOARG00000001107	USB1	93	65.021	ENSCPBG00000026943	USB1	93	63.178	Chrysemys_picta_bellii
ENSOARG00000001107	USB1	85	34.043	ENSCING00000011490	-	86	34.043	Ciona_intestinalis
ENSOARG00000001107	USB1	84	31.718	ENSCSAVG00000000894	-	81	31.718	Ciona_savignyi
ENSOARG00000001107	USB1	93	83.539	ENSCANG00000037135	USB1	96	81.423	Colobus_angolensis_palliatus
ENSOARG00000001107	USB1	95	80.321	ENSCGRG00001011243	USB1	93	80.321	Cricetulus_griseus_chok1gshd
ENSOARG00000001107	USB1	95	80.321	ENSCGRG00000013252	USB1	93	80.321	Cricetulus_griseus_crigri
ENSOARG00000001107	USB1	91	50.840	ENSCSEG00000013881	usb1	86	50.840	Cynoglossus_semilaevis
ENSOARG00000001107	USB1	86	50.000	ENSCVAG00000009252	usb1	97	50.439	Cyprinodon_variegatus
ENSOARG00000001107	USB1	95	48.988	ENSDARG00000003841	usb1	89	48.988	Danio_rerio
ENSOARG00000001107	USB1	93	80.165	ENSDORG00000001888	Usb1	95	77.470	Dipodomys_ordii
ENSOARG00000001107	USB1	88	37.607	FBgn0037713	CG16790	79	39.623	Drosophila_melanogaster
ENSOARG00000001107	USB1	92	69.295	ENSETEG00000019682	USB1	90	69.295	Echinops_telfairi
ENSOARG00000001107	USB1	85	48.649	ENSEBUG00000005889	usb1	78	48.649	Eptatretus_burgeri
ENSOARG00000001107	USB1	92	88.382	ENSEASG00005005484	USB1	91	88.382	Equus_asinus_asinus
ENSOARG00000001107	USB1	92	88.382	ENSECAG00000019493	USB1	83	88.382	Equus_caballus
ENSOARG00000001107	USB1	67	78.409	ENSEEUG00000000154	USB1	66	78.409	Erinaceus_europaeus
ENSOARG00000001107	USB1	87	49.123	ENSELUG00000010974	usb1	84	49.123	Esox_lucius
ENSOARG00000001107	USB1	95	85.425	ENSFCAG00000002693	USB1	93	85.425	Felis_catus
ENSOARG00000001107	USB1	86	65.179	ENSFALG00000006876	USB1	91	62.348	Ficedula_albicollis
ENSOARG00000001107	USB1	92	84.167	ENSFDAG00000010052	USB1	90	84.167	Fukomys_damarensis
ENSOARG00000001107	USB1	82	49.533	ENSFHEG00000012334	usb1	86	49.772	Fundulus_heteroclitus
ENSOARG00000001107	USB1	85	50.673	ENSGMOG00000004228	usb1	99	50.673	Gadus_morhua
ENSOARG00000001107	USB1	85	67.411	ENSGALG00000035604	USB1	99	61.004	Gallus_gallus
ENSOARG00000001107	USB1	95	49.200	ENSGAFG00000021890	usb1	90	49.200	Gambusia_affinis
ENSOARG00000001107	USB1	95	49.393	ENSGACG00000003257	usb1	88	49.393	Gasterosteus_aculeatus
ENSOARG00000001107	USB1	92	64.583	ENSGAGG00000022572	USB1	88	64.583	Gopherus_agassizii
ENSOARG00000001107	USB1	93	83.951	ENSGGOG00000017147	USB1	95	81.818	Gorilla_gorilla
ENSOARG00000001107	USB1	93	51.852	ENSHBUG00000009823	usb1	84	51.852	Haplochromis_burtoni
ENSOARG00000001107	USB1	93	83.607	ENSHGLG00000016078	USB1	89	83.607	Heterocephalus_glaber_female
ENSOARG00000001107	USB1	93	83.607	ENSHGLG00100005562	USB1	89	83.607	Heterocephalus_glaber_male
ENSOARG00000001107	USB1	83	52.315	ENSHCOG00000015633	usb1	86	52.466	Hippocampus_comes
ENSOARG00000001107	USB1	86	54.018	ENSIPUG00000008601	usb1	78	54.018	Ictalurus_punctatus
ENSOARG00000001107	USB1	93	84.774	ENSSTOG00000007548	USB1	89	84.774	Ictidomys_tridecemlineatus
ENSOARG00000001107	USB1	95	83.806	ENSJJAG00000021859	Usb1	92	83.806	Jaculus_jaculus
ENSOARG00000001107	USB1	87	51.982	ENSKMAG00000007200	usb1	80	51.982	Kryptolebias_marmoratus
ENSOARG00000001107	USB1	76	53.266	ENSLBEG00000008452	usb1	64	53.927	Labrus_bergylta
ENSOARG00000001107	USB1	79	58.852	ENSLACG00000000105	USB1	72	59.330	Latimeria_chalumnae
ENSOARG00000001107	USB1	99	53.053	ENSLOCG00000000465	usb1	87	55.510	Lepisosteus_oculatus
ENSOARG00000001107	USB1	96	63.492	ENSLAFG00000002267	USB1	93	63.889	Loxodonta_africana
ENSOARG00000001107	USB1	93	85.185	ENSMFAG00000003926	USB1	95	83.004	Macaca_fascicularis
ENSOARG00000001107	USB1	93	85.185	ENSMMUG00000022669	USB1	95	83.004	Macaca_mulatta
ENSOARG00000001107	USB1	93	84.774	ENSMNEG00000042487	USB1	95	82.609	Macaca_nemestrina
ENSOARG00000001107	USB1	93	85.185	ENSMLEG00000028756	USB1	95	83.004	Mandrillus_leucophaeus
ENSOARG00000001107	USB1	97	48.679	ENSMAMG00000015092	usb1	95	48.679	Mastacembelus_armatus
ENSOARG00000001107	USB1	93	51.440	ENSMZEG00005010008	usb1	84	51.440	Maylandia_zebra
ENSOARG00000001107	USB1	94	80.488	ENSMAUG00000007832	Usb1	92	80.488	Mesocricetus_auratus
ENSOARG00000001107	USB1	89	84.848	ENSMICG00000004900	USB1	95	82.213	Microcebus_murinus
ENSOARG00000001107	USB1	94	78.862	ENSMOCG00000022647	Usb1	92	78.862	Microtus_ochrogaster
ENSOARG00000001107	USB1	87	52.193	ENSMMOG00000000490	usb1	88	52.193	Mola_mola
ENSOARG00000001107	USB1	84	71.560	ENSMODG00000014067	USB1	94	66.008	Monodelphis_domestica
ENSOARG00000001107	USB1	91	52.101	ENSMALG00000005930	usb1	84	52.101	Monopterus_albus
ENSOARG00000001107	USB1	94	78.455	MGP_CAROLIEiJ_G0031421	Usb1	100	80.531	Mus_caroli
ENSOARG00000001107	USB1	94	77.642	ENSMUSG00000031792	Usb1	100	79.646	Mus_musculus
ENSOARG00000001107	USB1	93	78.601	MGP_PahariEiJ_G0023019	Usb1	100	80.342	Mus_pahari
ENSOARG00000001107	USB1	94	77.642	MGP_SPRETEiJ_G0032540	Usb1	92	77.642	Mus_spretus
ENSOARG00000001107	USB1	94	82.857	ENSMPUG00000004684	USB1	88	82.927	Mustela_putorius_furo
ENSOARG00000001107	USB1	89	90.043	ENSMLUG00000007400	USB1	100	90.043	Myotis_lucifugus
ENSOARG00000001107	USB1	93	83.539	ENSNGAG00000009703	Usb1	90	83.539	Nannospalax_galili
ENSOARG00000001107	USB1	93	47.951	ENSNBRG00000008747	usb1	99	52.336	Neolamprologus_brichardi
ENSOARG00000001107	USB1	87	83.772	ENSNLEG00000003340	USB1	95	81.513	Nomascus_leucogenys
ENSOARG00000001107	USB1	64	87.879	ENSOPRG00000011803	USB1	72	87.879	Ochotona_princeps
ENSOARG00000001107	USB1	93	81.070	ENSODEG00000016214	USB1	91	81.070	Octodon_degus
ENSOARG00000001107	USB1	87	53.304	ENSONIG00000011063	usb1	81	53.304	Oreochromis_niloticus
ENSOARG00000001107	USB1	90	69.787	ENSOANG00000012118	USB1	97	69.787	Ornithorhynchus_anatinus
ENSOARG00000001107	USB1	96	46.614	ENSORLG00000012479	usb1	91	46.614	Oryzias_latipes
ENSOARG00000001107	USB1	96	46.614	ENSORLG00020018671	usb1	91	46.614	Oryzias_latipes_hni
ENSOARG00000001107	USB1	96	46.215	ENSORLG00015009679	usb1	91	46.215	Oryzias_latipes_hsok
ENSOARG00000001107	USB1	90	47.660	ENSOMEG00000012930	usb1	85	47.660	Oryzias_melastigma
ENSOARG00000001107	USB1	94	77.642	ENSOGAG00000003273	USB1	95	76.285	Otolemur_garnettii
ENSOARG00000001107	USB1	93	83.539	ENSPPAG00000042137	USB1	95	81.423	Pan_paniscus
ENSOARG00000001107	USB1	95	84.615	ENSPPRG00000024797	USB1	99	80.303	Panthera_pardus
ENSOARG00000001107	USB1	95	84.615	ENSPTIG00000007506	USB1	93	84.615	Panthera_tigris_altaica
ENSOARG00000001107	USB1	93	76.955	ENSPTRG00000008172	USB1	100	85.981	Pan_troglodytes
ENSOARG00000001107	USB1	93	85.185	ENSPANG00000025138	USB1	95	83.004	Papio_anubis
ENSOARG00000001107	USB1	95	51.587	ENSPKIG00000015109	usb1	86	51.765	Paramormyrops_kingsleyae
ENSOARG00000001107	USB1	86	53.070	ENSPSIG00000004305	USB1	100	53.070	Pelodiscus_sinensis
ENSOARG00000001107	USB1	85	51.121	ENSPMGG00000017725	usb1	85	51.121	Periophthalmus_magnuspinnatus
ENSOARG00000001107	USB1	93	81.070	ENSPEMG00000016183	Usb1	92	79.681	Peromyscus_maniculatus_bairdii
ENSOARG00000001107	USB1	89	52.119	ENSPMAG00000000462	usb1	99	52.119	Petromyzon_marinus
ENSOARG00000001107	USB1	91	50.628	ENSPFOG00000011130	usb1	86	50.628	Poecilia_formosa
ENSOARG00000001107	USB1	91	50.209	ENSPLAG00000009820	usb1	86	50.209	Poecilia_latipinna
ENSOARG00000001107	USB1	91	50.628	ENSPMEG00000006402	usb1	86	50.628	Poecilia_mexicana
ENSOARG00000001107	USB1	82	51.402	ENSPREG00000001047	usb1	86	51.402	Poecilia_reticulata
ENSOARG00000001107	USB1	88	79.565	ENSPPYG00000007401	USB1	95	77.500	Pongo_abelii
ENSOARG00000001107	USB1	94	82.927	ENSPCOG00000022612	USB1	95	81.423	Propithecus_coquereli
ENSOARG00000001107	USB1	97	81.028	ENSPVAG00000004613	USB1	95	81.028	Pteropus_vampyrus
ENSOARG00000001107	USB1	93	51.852	ENSPNYG00000022262	usb1	84	51.852	Pundamilia_nyererei
ENSOARG00000001107	USB1	97	49.606	ENSPNAG00000011736	usb1	86	49.606	Pygocentrus_nattereri
ENSOARG00000001107	USB1	94	78.862	ENSRNOG00000013216	Usb1	92	78.862	Rattus_norvegicus
ENSOARG00000001107	USB1	93	78.189	ENSRBIG00000044466	USB1	100	87.383	Rhinopithecus_bieti
ENSOARG00000001107	USB1	93	84.362	ENSRROG00000029211	USB1	95	82.213	Rhinopithecus_roxellana
ENSOARG00000001107	USB1	93	84.774	ENSSBOG00000029362	USB1	95	82.609	Saimiri_boliviensis_boliviensis
ENSOARG00000001107	USB1	84	71.233	ENSSHAG00000006993	USB1	98	67.611	Sarcophilus_harrisii
ENSOARG00000001107	USB1	89	56.710	ENSSFOG00015023663	usb1	73	56.710	Scleropages_formosus
ENSOARG00000001107	USB1	90	51.004	ENSSMAG00000015834	usb1	84	51.004	Scophthalmus_maximus
ENSOARG00000001107	USB1	86	55.357	ENSSDUG00000002949	usb1	83	55.357	Seriola_dumerili
ENSOARG00000001107	USB1	86	55.357	ENSSLDG00000014174	usb1	80	55.357	Seriola_lalandi_dorsalis
ENSOARG00000001107	USB1	82	66.822	ENSSPUG00000006741	USB1	100	66.822	Sphenodon_punctatus
ENSOARG00000001107	USB1	91	49.580	ENSSPAG00000007484	usb1	83	49.580	Stegastes_partitus
ENSOARG00000001107	USB1	94	88.980	ENSSSCG00000002807	USB1	92	88.664	Sus_scrofa
ENSOARG00000001107	USB1	80	68.900	ENSTGUG00000004792	USB1	82	68.900	Taeniopygia_guttata
ENSOARG00000001107	USB1	92	48.954	ENSTRUG00000021069	usb1	88	48.954	Takifugu_rubripes
ENSOARG00000001107	USB1	95	45.749	ENSTNIG00000000626	usb1	91	45.749	Tetraodon_nigroviridis
ENSOARG00000001107	USB1	89	58.621	ENSTBEG00000001507	USB1	100	58.621	Tupaia_belangeri
ENSOARG00000001107	USB1	92	85.062	ENSUAMG00000016823	USB1	92	84.211	Ursus_americanus
ENSOARG00000001107	USB1	82	85.514	ENSUMAG00000021369	USB1	100	85.514	Ursus_maritimus
ENSOARG00000001107	USB1	97	83.333	ENSVVUG00000023700	USB1	93	84.583	Vulpes_vulpes
ENSOARG00000001107	USB1	83	56.881	ENSXETG00000013795	usb1	89	56.951	Xenopus_tropicalis
ENSOARG00000001107	USB1	95	49.597	ENSXMAG00000024687	usb1	73	49.597	Xiphophorus_maculatus