EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000001352 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: -
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 49076 bases
Position: chr12:62647759-62696834
Accession: 101105838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000001418	EST1	PF10374.9	5.3e-25	1	1
ENSOARP00000001417	EST1	PF10374.9	5.9e-25	1	1
ENSOARP00000001418	EST1_DNA_bind	PF10373.9	1.3e-55	1	1
ENSOARP00000001417	EST1_DNA_bind	PF10373.9	1.5e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000001458	SMG7-202	3222	-	ENSOARP00000001418	1073 (aa)	-	W5NTC7
ENSOART00000001457	SMG7-201	3513	XM_004013859	ENSOARP00000001417	1170 (aa)	XP_014954841	W5NTC6

Gene Model

Click here to download ENSOARG00000001352's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000001352's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000001352	SMG7	100	96.239	ENSG00000116698	SMG7	100	99.333	Homo_sapiens
ENSOARG00000001352	SMG7	89	71.017	ENSAPOG00000009611	smg7	95	71.861	Acanthochromis_polyacanthus
ENSOARG00000001352	SMG7	100	92.583	ENSAMEG00000002357	SMG7	100	92.664	Ailuropoda_melanoleuca
ENSOARG00000001352	SMG7	92	68.325	ENSACIG00000015152	smg7	100	63.896	Amphilophus_citrinellus
ENSOARG00000001352	SMG7	100	65.074	ENSAOCG00000013538	smg7	99	65.278	Amphiprion_ocellaris
ENSOARG00000001352	SMG7	100	64.931	ENSAPEG00000007851	smg7	99	65.221	Amphiprion_percula
ENSOARG00000001352	SMG7	100	64.193	ENSATEG00000006931	smg7	99	64.848	Anabas_testudineus
ENSOARG00000001352	SMG7	100	85.067	ENSAPLG00000015811	SMG7	98	84.978	Anas_platyrhynchos
ENSOARG00000001352	SMG7	97	83.501	ENSACAG00000014989	SMG7	99	84.020	Anolis_carolinensis
ENSOARG00000001352	SMG7	100	92.188	ENSANAG00000028114	SMG7	100	92.188	Aotus_nancymaae
ENSOARG00000001352	SMG7	100	64.193	ENSACLG00000022079	smg7	99	65.183	Astatotilapia_calliptera
ENSOARG00000001352	SMG7	100	66.696	ENSAMXG00000020809	smg7	99	66.695	Astyanax_mexicanus
ENSOARG00000001352	SMG7	100	98.889	ENSBTAG00000008003	SMG7	100	98.889	Bos_taurus
ENSOARG00000001352	SMG7	99	95.976	ENSCJAG00000005135	SMG7	100	95.969	Callithrix_jacchus
ENSOARG00000001352	SMG7	100	96.581	ENSCAFG00000013276	SMG7	100	96.581	Canis_familiaris
ENSOARG00000001352	SMG7	100	96.581	ENSCAFG00020015475	SMG7	100	96.581	Canis_lupus_dingo
ENSOARG00000001352	SMG7	97	99.647	ENSCHIG00000018192	SMG7	99	99.647	Capra_hircus
ENSOARG00000001352	SMG7	100	95.214	ENSTSYG00000002667	SMG7	100	95.214	Carlito_syrichta
ENSOARG00000001352	SMG7	99	95.283	ENSCPOG00000008906	SMG7	100	95.197	Cavia_porcellus
ENSOARG00000001352	SMG7	100	91.957	ENSCCAG00000028596	SMG7	100	92.052	Cebus_capucinus
ENSOARG00000001352	SMG7	100	96.410	ENSCATG00000011063	SMG7	100	96.410	Cercocebus_atys
ENSOARG00000001352	SMG7	100	95.897	ENSCLAG00000010751	SMG7	100	95.897	Chinchilla_lanigera
ENSOARG00000001352	SMG7	100	96.410	ENSCSAG00000012654	SMG7	100	96.410	Chlorocebus_sabaeus
ENSOARG00000001352	SMG7	93	87.393	ENSCHOG00000010522	SMG7	93	87.679	Choloepus_hoffmanni
ENSOARG00000001352	SMG7	100	87.255	ENSCPBG00000015724	SMG7	99	87.648	Chrysemys_picta_bellii
ENSOARG00000001352	SMG7	100	92.225	ENSCANG00000015680	SMG7	100	92.314	Colobus_angolensis_palliatus
ENSOARG00000001352	SMG7	99	94.940	ENSCGRG00001013705	Smg7	100	94.940	Cricetulus_griseus_chok1gshd
ENSOARG00000001352	SMG7	98	94.865	ENSCGRG00000018401	Smg7	100	94.865	Cricetulus_griseus_crigri
ENSOARG00000001352	SMG7	93	70.500	ENSCVAG00000011842	smg7	100	70.000	Cyprinodon_variegatus
ENSOARG00000001352	SMG7	100	66.111	ENSDARG00000060767	smg7	99	66.141	Danio_rerio
ENSOARG00000001352	SMG7	98	95.039	ENSDORG00000007331	Smg7	100	95.039	Dipodomys_ordii
ENSOARG00000001352	SMG7	94	94.343	ENSETEG00000002654	SMG7	99	94.343	Echinops_telfairi
ENSOARG00000001352	SMG7	100	97.094	ENSEASG00005006524	SMG7	100	97.094	Equus_asinus_asinus
ENSOARG00000001352	SMG7	100	97.179	ENSECAG00000004313	SMG7	100	97.179	Equus_caballus
ENSOARG00000001352	SMG7	93	96.218	ENSEEUG00000002024	SMG7	92	96.218	Erinaceus_europaeus
ENSOARG00000001352	SMG7	90	76.923	ENSELUG00000010293	smg7	98	66.330	Esox_lucius
ENSOARG00000001352	SMG7	100	96.831	ENSFCAG00000010900	SMG7	100	97.092	Felis_catus
ENSOARG00000001352	SMG7	96	82.568	ENSFALG00000003047	SMG7	100	82.368	Ficedula_albicollis
ENSOARG00000001352	SMG7	97	95.933	ENSFDAG00000012121	SMG7	99	95.811	Fukomys_damarensis
ENSOARG00000001352	SMG7	100	63.304	ENSFHEG00000011073	smg7	99	63.185	Fundulus_heteroclitus
ENSOARG00000001352	SMG7	87	67.151	ENSGMOG00000004916	smg7	92	67.151	Gadus_morhua
ENSOARG00000001352	SMG7	100	85.258	ENSGALG00000004667	SMG7	98	85.169	Gallus_gallus
ENSOARG00000001352	SMG7	100	63.034	ENSGAFG00000019000	smg7	99	62.860	Gambusia_affinis
ENSOARG00000001352	SMG7	97	62.201	ENSGACG00000001634	smg7	99	65.031	Gasterosteus_aculeatus
ENSOARG00000001352	SMG7	100	96.239	ENSGGOG00000002342	SMG7	100	96.239	Gorilla_gorilla
ENSOARG00000001352	SMG7	100	63.741	ENSHBUG00000003726	smg7	97	73.604	Haplochromis_burtoni
ENSOARG00000001352	SMG7	96	95.989	ENSHGLG00000009353	SMG7	100	95.989	Heterocephalus_glaber_female
ENSOARG00000001352	SMG7	97	88.085	ENSHGLG00100004878	-	99	88.085	Heterocephalus_glaber_male
ENSOARG00000001352	SMG7	100	92.046	ENSHGLG00100009637	-	100	94.296	Heterocephalus_glaber_male
ENSOARG00000001352	SMG7	100	67.376	ENSIPUG00000016997	smg7	99	67.593	Ictalurus_punctatus
ENSOARG00000001352	SMG7	100	96.552	ENSSTOG00000000401	SMG7	100	96.606	Ictidomys_tridecemlineatus
ENSOARG00000001352	SMG7	97	94.969	ENSJJAG00000012351	Smg7	99	94.969	Jaculus_jaculus
ENSOARG00000001352	SMG7	99	61.464	ENSKMAG00000004900	smg7	100	61.728	Kryptolebias_marmoratus
ENSOARG00000001352	SMG7	100	64.609	ENSLBEG00000002983	smg7	98	64.454	Labrus_bergylta
ENSOARG00000001352	SMG7	51	64.273	ENSLBEG00000005220	-	75	64.273	Labrus_bergylta
ENSOARG00000001352	SMG7	100	72.592	ENSLACG00000000972	SMG7	99	75.152	Latimeria_chalumnae
ENSOARG00000001352	SMG7	97	67.559	ENSLOCG00000002010	smg7	99	67.559	Lepisosteus_oculatus
ENSOARG00000001352	SMG7	98	96.171	ENSLAFG00000008186	SMG7	100	96.171	Loxodonta_africana
ENSOARG00000001352	SMG7	100	96.496	ENSMFAG00000031653	SMG7	100	96.496	Macaca_fascicularis
ENSOARG00000001352	SMG7	100	96.410	ENSMMUG00000018458	SMG7	100	96.410	Macaca_mulatta
ENSOARG00000001352	SMG7	100	92.315	ENSMNEG00000034798	SMG7	100	92.402	Macaca_nemestrina
ENSOARG00000001352	SMG7	100	96.410	ENSMLEG00000037170	SMG7	100	96.410	Mandrillus_leucophaeus
ENSOARG00000001352	SMG7	87	63.968	ENSMAMG00000018733	smg7	84	66.102	Mastacembelus_armatus
ENSOARG00000001352	SMG7	100	64.477	ENSMZEG00005015247	smg7	99	65.096	Maylandia_zebra
ENSOARG00000001352	SMG7	99	85.040	ENSMGAG00000001561	SMG7	99	84.951	Meleagris_gallopavo
ENSOARG00000001352	SMG7	98	95.300	ENSMAUG00000019484	Smg7	100	95.300	Mesocricetus_auratus
ENSOARG00000001352	SMG7	98	96.258	ENSMICG00000007145	SMG7	100	96.258	Microcebus_murinus
ENSOARG00000001352	SMG7	98	94.952	ENSMOCG00000020748	Smg7	100	94.952	Microtus_ochrogaster
ENSOARG00000001352	SMG7	100	62.992	ENSMMOG00000001524	smg7	98	63.246	Mola_mola
ENSOARG00000001352	SMG7	92	88.878	ENSMODG00000007139	SMG7	98	88.878	Monodelphis_domestica
ENSOARG00000001352	SMG7	100	64.429	ENSMALG00000000061	smg7	94	68.657	Monopterus_albus
ENSOARG00000001352	SMG7	98	94.865	MGP_CAROLIEiJ_G0014704	Smg7	100	93.995	Mus_caroli
ENSOARG00000001352	SMG7	98	94.778	ENSMUSG00000042772	Smg7	100	94.778	Mus_musculus
ENSOARG00000001352	SMG7	98	94.952	MGP_PahariEiJ_G0027940	Smg7	100	94.952	Mus_pahari
ENSOARG00000001352	SMG7	98	94.865	MGP_SPRETEiJ_G0015511	Smg7	100	94.865	Mus_spretus
ENSOARG00000001352	SMG7	96	96.435	ENSMPUG00000011732	SMG7	97	96.435	Mustela_putorius_furo
ENSOARG00000001352	SMG7	97	95.940	ENSMLUG00000015417	SMG7	99	95.940	Myotis_lucifugus
ENSOARG00000001352	SMG7	98	94.952	ENSNGAG00000009836	Smg7	100	94.952	Nannospalax_galili
ENSOARG00000001352	SMG7	99	60.437	ENSNBRG00000024343	smg7	98	71.429	Neolamprologus_brichardi
ENSOARG00000001352	SMG7	100	96.496	ENSNLEG00000018018	SMG7	100	96.496	Nomascus_leucogenys
ENSOARG00000001352	SMG7	75	84.724	ENSMEUG00000004681	SMG7	77	84.937	Notamacropus_eugenii
ENSOARG00000001352	SMG7	94	84.384	ENSOPRG00000013942	SMG7	96	84.110	Ochotona_princeps
ENSOARG00000001352	SMG7	98	95.387	ENSODEG00000010390	SMG7	100	95.387	Octodon_degus
ENSOARG00000001352	SMG7	100	63.801	ENSONIG00000000277	smg7	99	64.957	Oreochromis_niloticus
ENSOARG00000001352	SMG7	96	90.071	ENSOANG00000000994	SMG7	100	90.426	Ornithorhynchus_anatinus
ENSOARG00000001352	SMG7	100	89.573	ENSOCUG00000005887	SMG7	95	89.744	Oryctolagus_cuniculus
ENSOARG00000001352	SMG7	100	62.236	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSOARG00000001352	SMG7	100	62.588	ENSORLG00020015779	smg7	70	92.763	Oryzias_latipes_hni
ENSOARG00000001352	SMG7	100	62.982	ENSORLG00015012289	smg7	99	62.521	Oryzias_latipes_hsok
ENSOARG00000001352	SMG7	100	60.884	ENSOMEG00000002328	smg7	99	62.769	Oryzias_melastigma
ENSOARG00000001352	SMG7	94	94.526	ENSOGAG00000003107	SMG7	93	94.343	Otolemur_garnettii
ENSOARG00000001352	SMG7	100	92.315	ENSPPAG00000031619	SMG7	100	92.402	Pan_paniscus
ENSOARG00000001352	SMG7	99	97.263	ENSPPRG00000011222	SMG7	100	97.263	Panthera_pardus
ENSOARG00000001352	SMG7	94	96.989	ENSPTIG00000007242	SMG7	100	93.188	Panthera_tigris_altaica
ENSOARG00000001352	SMG7	100	92.315	ENSPTRG00000001764	SMG7	100	92.402	Pan_troglodytes
ENSOARG00000001352	SMG7	100	96.410	ENSPANG00000004520	SMG7	100	96.410	Papio_anubis
ENSOARG00000001352	SMG7	100	62.633	ENSPKIG00000007242	smg7	99	68.000	Paramormyrops_kingsleyae
ENSOARG00000001352	SMG7	97	90.501	ENSPSIG00000012201	SMG7	99	90.325	Pelodiscus_sinensis
ENSOARG00000001352	SMG7	54	58.163	ENSPMGG00000021833	smg7	89	54.000	Periophthalmus_magnuspinnatus
ENSOARG00000001352	SMG7	98	94.517	ENSPEMG00000011315	Smg7	100	94.517	Peromyscus_maniculatus_bairdii
ENSOARG00000001352	SMG7	100	88.393	ENSPCIG00000003786	SMG7	99	90.404	Phascolarctos_cinereus
ENSOARG00000001352	SMG7	100	60.434	ENSPFOG00000019219	smg7	99	62.963	Poecilia_formosa
ENSOARG00000001352	SMG7	100	63.240	ENSPLAG00000001446	smg7	99	63.066	Poecilia_latipinna
ENSOARG00000001352	SMG7	97	62.376	ENSPMEG00000005218	smg7	98	62.196	Poecilia_mexicana
ENSOARG00000001352	SMG7	87	59.820	ENSPREG00000019039	smg7	92	59.886	Poecilia_reticulata
ENSOARG00000001352	SMG7	100	92.404	ENSPPYG00000000427	SMG7	98	92.404	Pongo_abelii
ENSOARG00000001352	SMG7	93	84.410	ENSPCAG00000008360	SMG7	94	84.410	Procavia_capensis
ENSOARG00000001352	SMG7	100	96.239	ENSPCOG00000011996	SMG7	100	95.641	Propithecus_coquereli
ENSOARG00000001352	SMG7	89	90.865	ENSPVAG00000000851	SMG7	89	90.865	Pteropus_vampyrus
ENSOARG00000001352	SMG7	100	64.773	ENSPNYG00000007643	smg7	99	65.035	Pundamilia_nyererei
ENSOARG00000001352	SMG7	100	66.989	ENSPNAG00000011374	smg7	98	69.697	Pygocentrus_nattereri
ENSOARG00000001352	SMG7	99	94.944	ENSRNOG00000027962	Smg7	100	95.370	Rattus_norvegicus
ENSOARG00000001352	SMG7	100	96.325	ENSRBIG00000036316	SMG7	100	96.325	Rhinopithecus_bieti
ENSOARG00000001352	SMG7	100	96.325	ENSRROG00000035719	SMG7	100	96.325	Rhinopithecus_roxellana
ENSOARG00000001352	SMG7	100	95.899	ENSSBOG00000023454	SMG7	99	95.940	Saimiri_boliviensis_boliviensis
ENSOARG00000001352	SMG7	100	88.304	ENSSHAG00000013147	SMG7	98	88.046	Sarcophilus_harrisii
ENSOARG00000001352	SMG7	100	66.962	ENSSFOG00015017252	smg7	99	76.316	Scleropages_formosus
ENSOARG00000001352	SMG7	100	64.298	ENSSMAG00000006067	smg7	99	64.570	Scophthalmus_maximus
ENSOARG00000001352	SMG7	96	71.690	ENSSDUG00000017543	smg7	99	64.599	Seriola_dumerili
ENSOARG00000001352	SMG7	100	85.307	ENSSPUG00000002064	SMG7	98	85.218	Sphenodon_punctatus
ENSOARG00000001352	SMG7	99	64.960	ENSSPAG00000008733	smg7	98	65.049	Stegastes_partitus
ENSOARG00000001352	SMG7	100	97.094	ENSSSCG00000015558	SMG7	100	97.094	Sus_scrofa
ENSOARG00000001352	SMG7	100	85.080	ENSTGUG00000003928	SMG7	99	85.080	Taeniopygia_guttata
ENSOARG00000001352	SMG7	100	61.026	ENSTNIG00000002802	smg7	99	63.291	Tetraodon_nigroviridis
ENSOARG00000001352	SMG7	76	94.086	ENSTBEG00000003220	SMG7	75	94.492	Tupaia_belangeri
ENSOARG00000001352	SMG7	94	97.078	ENSTTRG00000014778	SMG7	94	97.078	Tursiops_truncatus
ENSOARG00000001352	SMG7	98	96.759	ENSUAMG00000017473	SMG7	100	96.759	Ursus_americanus
ENSOARG00000001352	SMG7	98	96.759	ENSUMAG00000016389	SMG7	100	96.815	Ursus_maritimus
ENSOARG00000001352	SMG7	100	96.667	ENSVVUG00000008976	SMG7	100	96.667	Vulpes_vulpes
ENSOARG00000001352	SMG7	100	68.269	ENSXETG00000012528	smg7	99	68.546	Xenopus_tropicalis
ENSOARG00000001352	SMG7	100	63.264	ENSXMAG00000007123	smg7	99	63.438	Xiphophorus_maculatus