EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000001899 (Gene tree)
Gene ID: 101120896
Gene Symbol: PUM1
Alias: -
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 117956 bases
Position: chr2:235373394-235491349
Accession: 101120896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000002003	PUF	PF00806.19	9.8e-72	1	8
ENSOARP00000002003	PUF	PF00806.19	9.8e-72	2	8
ENSOARP00000002003	PUF	PF00806.19	9.8e-72	3	8
ENSOARP00000002003	PUF	PF00806.19	9.8e-72	4	8
ENSOARP00000002003	PUF	PF00806.19	9.8e-72	5	8
ENSOARP00000002003	PUF	PF00806.19	9.8e-72	6	8
ENSOARP00000002003	PUF	PF00806.19	9.8e-72	7	8
ENSOARP00000002003	PUF	PF00806.19	9.8e-72	8	8
ENSOARP00000001997	PUF	PF00806.19	4.3e-71	1	8
ENSOARP00000001997	PUF	PF00806.19	4.3e-71	2	8
ENSOARP00000001997	PUF	PF00806.19	4.3e-71	3	8
ENSOARP00000001997	PUF	PF00806.19	4.3e-71	4	8
ENSOARP00000001997	PUF	PF00806.19	4.3e-71	5	8
ENSOARP00000001997	PUF	PF00806.19	4.3e-71	6	8
ENSOARP00000001997	PUF	PF00806.19	4.3e-71	7	8
ENSOARP00000001997	PUF	PF00806.19	4.3e-71	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000002050	PUM1-202	3338	-	ENSOARP00000002003	1108 (aa)	XP_012005501	W5NV08
ENSOART00000002044	PUM1-201	3563	XM_004005047	ENSOARP00000001997	1183 (aa)	XP_004005096	W5NV02

Gene Model

Click here to download ENSOARG00000001899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000001899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000001899	PUM1	89	80.335	ENSOARG00000017236	PUM2	93	89.320

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000001899	PUM1	100	99.757	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSOARG00000001899	PUM1	90	91.566	ENSAPOG00000021632	pum1	100	91.084	Acanthochromis_polyacanthus
ENSOARG00000001899	PUM1	100	99.517	ENSAMEG00000017656	PUM1	97	98.655	Ailuropoda_melanoleuca
ENSOARG00000001899	PUM1	100	74.003	ENSACIG00000021013	pum1	100	76.119	Amphilophus_citrinellus
ENSOARG00000001899	PUM1	90	91.566	ENSAOCG00000003944	pum1	100	91.084	Amphiprion_ocellaris
ENSOARG00000001899	PUM1	90	91.566	ENSAPEG00000014550	pum1	100	91.084	Amphiprion_percula
ENSOARG00000001899	PUM1	100	91.566	ENSATEG00000016004	pum1	100	91.084	Anabas_testudineus
ENSOARG00000001899	PUM1	100	98.309	ENSAPLG00000009351	PUM1	100	96.720	Anas_platyrhynchos
ENSOARG00000001899	PUM1	100	98.551	ENSACAG00000000682	PUM1	98	94.870	Anolis_carolinensis
ENSOARG00000001899	PUM1	100	99.515	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSOARG00000001899	PUM1	90	75.926	ENSACLG00000019354	pum1	100	78.189	Astatotilapia_calliptera
ENSOARG00000001899	PUM1	100	77.750	ENSAMXG00000020607	pum1	92	92.754	Astyanax_mexicanus
ENSOARG00000001899	PUM1	100	100.000	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSOARG00000001899	PUM1	100	99.458	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSOARG00000001899	PUM1	100	99.517	ENSCAFG00000011205	PUM1	100	96.384	Canis_familiaris
ENSOARG00000001899	PUM1	92	97.633	ENSCAFG00020024616	PUM1	98	99.517	Canis_lupus_dingo
ENSOARG00000001899	PUM1	100	100.000	ENSCHIG00000012952	PUM1	100	99.910	Capra_hircus
ENSOARG00000001899	PUM1	100	99.275	ENSTSYG00000008868	PUM1	100	99.306	Carlito_syrichta
ENSOARG00000001899	PUM1	100	98.792	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSOARG00000001899	PUM1	100	99.275	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSOARG00000001899	PUM1	100	99.188	ENSCLAG00000007662	PUM1	100	99.306	Chinchilla_lanigera
ENSOARG00000001899	PUM1	100	99.275	ENSCSAG00000001028	PUM1	100	97.750	Chlorocebus_sabaeus
ENSOARG00000001899	PUM1	99	96.121	ENSCHOG00000010245	PUM1	93	96.121	Choloepus_hoffmanni
ENSOARG00000001899	PUM1	100	98.309	ENSCPBG00000009288	PUM1	100	98.309	Chrysemys_picta_bellii
ENSOARG00000001899	PUM1	100	99.549	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSOARG00000001899	PUM1	100	98.786	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSOARG00000001899	PUM1	100	98.786	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSOARG00000001899	PUM1	90	75.556	ENSCSEG00000015981	pum1	100	77.151	Cynoglossus_semilaevis
ENSOARG00000001899	PUM1	100	73.284	ENSCVAG00000007043	pum1	100	75.145	Cyprinodon_variegatus
ENSOARG00000001899	PUM1	100	92.995	ENSDARG00000099256	pum1	95	93.750	Danio_rerio
ENSOARG00000001899	PUM1	100	99.034	ENSDNOG00000010939	PUM1	100	98.234	Dasypus_novemcinctus
ENSOARG00000001899	PUM1	89	98.381	ENSDORG00000001875	Pum1	100	98.792	Dipodomys_ordii
ENSOARG00000001899	PUM1	87	95.191	ENSETEG00000004355	PUM1	87	92.780	Echinops_telfairi
ENSOARG00000001899	PUM1	100	99.034	ENSEASG00005010813	PUM1	100	98.318	Equus_asinus_asinus
ENSOARG00000001899	PUM1	100	99.034	ENSECAG00000021369	PUM1	100	98.318	Equus_caballus
ENSOARG00000001899	PUM1	79	100.000	ENSEEUG00000003871	PUM1	74	100.000	Erinaceus_europaeus
ENSOARG00000001899	PUM1	100	75.493	ENSELUG00000002409	pum1	95	93.237	Esox_lucius
ENSOARG00000001899	PUM1	100	100.000	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSOARG00000001899	PUM1	100	98.551	ENSFALG00000001214	PUM1	93	98.551	Ficedula_albicollis
ENSOARG00000001899	PUM1	100	98.783	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSOARG00000001899	PUM1	91	91.084	ENSGMOG00000010491	pum1	94	90.602	Gadus_morhua
ENSOARG00000001899	PUM1	100	98.551	ENSGALG00000042598	PUM1	100	96.972	Gallus_gallus
ENSOARG00000001899	PUM1	90	87.816	ENSGAFG00000015617	pum1	100	81.684	Gambusia_affinis
ENSOARG00000001899	PUM1	100	74.257	ENSGACG00000005717	pum1	100	75.783	Gasterosteus_aculeatus
ENSOARG00000001899	PUM1	100	98.309	ENSGAGG00000001290	PUM1	100	96.552	Gopherus_agassizii
ENSOARG00000001899	PUM1	100	99.549	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSOARG00000001899	PUM1	100	73.697	ENSHBUG00000018718	pum1	100	75.640	Haplochromis_burtoni
ENSOARG00000001899	PUM1	100	98.540	ENSHGLG00000013819	Pum1	100	98.611	Heterocephalus_glaber_female
ENSOARG00000001899	PUM1	100	98.540	ENSHGLG00100008621	Pum1	100	98.611	Heterocephalus_glaber_male
ENSOARG00000001899	PUM1	100	92.029	ENSIPUG00000020421	pum1	93	92.029	Ictalurus_punctatus
ENSOARG00000001899	PUM1	100	98.792	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSOARG00000001899	PUM1	100	98.551	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSOARG00000001899	PUM1	100	73.532	ENSKMAG00000003481	pum1	100	75.392	Kryptolebias_marmoratus
ENSOARG00000001899	PUM1	100	91.566	ENSLBEG00000002527	pum1	94	91.084	Labrus_bergylta
ENSOARG00000001899	PUM1	100	87.530	ENSLACG00000017188	PUM1	99	86.012	Latimeria_chalumnae
ENSOARG00000001899	PUM1	100	96.377	ENSLOCG00000005210	pum1	95	96.377	Lepisosteus_oculatus
ENSOARG00000001899	PUM1	100	98.792	ENSLAFG00000003178	PUM1	100	98.066	Loxodonta_africana
ENSOARG00000001899	PUM1	100	99.758	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSOARG00000001899	PUM1	100	99.549	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSOARG00000001899	PUM1	100	99.549	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSOARG00000001899	PUM1	100	99.549	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSOARG00000001899	PUM1	100	91.325	ENSMAMG00000011606	pum1	94	90.843	Mastacembelus_armatus
ENSOARG00000001899	PUM1	100	73.697	ENSMZEG00005005834	pum1	100	75.640	Maylandia_zebra
ENSOARG00000001899	PUM1	100	98.551	ENSMGAG00000000724	PUM1	100	96.720	Meleagris_gallopavo
ENSOARG00000001899	PUM1	100	98.792	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSOARG00000001899	PUM1	100	99.368	ENSMICG00000007713	-	100	99.368	Microcebus_murinus
ENSOARG00000001899	PUM1	100	96.751	ENSMICG00000012213	-	100	96.751	Microcebus_murinus
ENSOARG00000001899	PUM1	100	98.551	ENSMOCG00000015463	Pum1	100	98.611	Microtus_ochrogaster
ENSOARG00000001899	PUM1	90	88.276	ENSMMOG00000019817	pum1	100	90.843	Mola_mola
ENSOARG00000001899	PUM1	100	97.826	ENSMODG00000017067	PUM1	100	96.809	Monodelphis_domestica
ENSOARG00000001899	PUM1	90	88.506	ENSMALG00000016399	pum1	100	91.084	Monopterus_albus
ENSOARG00000001899	PUM1	100	99.029	MGP_CAROLIEiJ_G0026549	Pum1	100	98.611	Mus_caroli
ENSOARG00000001899	PUM1	100	99.272	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSOARG00000001899	PUM1	100	99.272	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSOARG00000001899	PUM1	100	99.272	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSOARG00000001899	PUM1	100	98.792	ENSMPUG00000015454	PUM1	100	98.234	Mustela_putorius_furo
ENSOARG00000001899	PUM1	100	100.000	ENSMLUG00000006490	PUM1	100	98.234	Myotis_lucifugus
ENSOARG00000001899	PUM1	100	98.792	ENSNGAG00000002378	Pum1	100	98.611	Nannospalax_galili
ENSOARG00000001899	PUM1	80	80.222	ENSNBRG00000010689	pum1	100	82.367	Neolamprologus_brichardi
ENSOARG00000001899	PUM1	100	98.014	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSOARG00000001899	PUM1	84	96.959	ENSMEUG00000000976	-	82	96.959	Notamacropus_eugenii
ENSOARG00000001899	PUM1	84	99.065	ENSOPRG00000001776	PUM1	73	99.065	Ochotona_princeps
ENSOARG00000001899	PUM1	100	98.792	ENSODEG00000003465	PUM1	100	98.611	Octodon_degus
ENSOARG00000001899	PUM1	100	74.283	ENSONIG00000002290	pum1	93	90.843	Oreochromis_niloticus
ENSOARG00000001899	PUM1	80	83.269	ENSOANG00000004902	-	100	76.844	Ornithorhynchus_anatinus
ENSOARG00000001899	PUM1	100	98.544	ENSOCUG00000008641	PUM1	99	97.897	Oryctolagus_cuniculus
ENSOARG00000001899	PUM1	100	74.279	ENSORLG00000011482	pum1	94	90.602	Oryzias_latipes
ENSOARG00000001899	PUM1	100	74.361	ENSORLG00020019461	pum1	100	75.473	Oryzias_latipes_hni
ENSOARG00000001899	PUM1	100	74.361	ENSORLG00015011375	pum1	100	75.556	Oryzias_latipes_hsok
ENSOARG00000001899	PUM1	90	92.771	ENSOMEG00000009312	pum1	100	90.361	Oryzias_melastigma
ENSOARG00000001899	PUM1	100	96.409	ENSOGAG00000011063	PUM1	100	95.634	Otolemur_garnettii
ENSOARG00000001899	PUM1	100	99.549	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSOARG00000001899	PUM1	100	99.517	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSOARG00000001899	PUM1	100	99.517	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSOARG00000001899	PUM1	100	99.549	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSOARG00000001899	PUM1	100	99.758	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSOARG00000001899	PUM1	100	78.191	ENSPKIG00000010578	pum1	93	93.478	Paramormyrops_kingsleyae
ENSOARG00000001899	PUM1	100	98.309	ENSPSIG00000014118	PUM1	100	96.972	Pelodiscus_sinensis
ENSOARG00000001899	PUM1	78	92.252	ENSPMGG00000005836	pum1	90	91.768	Periophthalmus_magnuspinnatus
ENSOARG00000001899	PUM1	100	98.792	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSOARG00000001899	PUM1	100	97.826	ENSPCIG00000014151	PUM1	100	98.309	Phascolarctos_cinereus
ENSOARG00000001899	PUM1	94	90.843	ENSPFOG00000007289	pum1	93	90.361	Poecilia_formosa
ENSOARG00000001899	PUM1	100	90.843	ENSPLAG00000007256	pum1	94	90.361	Poecilia_latipinna
ENSOARG00000001899	PUM1	90	76.703	ENSPMEG00000019543	pum1	99	77.665	Poecilia_mexicana
ENSOARG00000001899	PUM1	100	73.863	ENSPREG00000005195	pum1	100	80.024	Poecilia_reticulata
ENSOARG00000001899	PUM1	100	99.275	ENSPPYG00000001621	PUM1	100	96.620	Pongo_abelii
ENSOARG00000001899	PUM1	83	99.174	ENSPCAG00000001979	PUM1	74	99.691	Procavia_capensis
ENSOARG00000001899	PUM1	100	99.368	ENSPCOG00000004398	PUM1	100	99.368	Propithecus_coquereli
ENSOARG00000001899	PUM1	100	96.384	ENSPVAG00000005207	PUM1	97	96.384	Pteropus_vampyrus
ENSOARG00000001899	PUM1	100	73.780	ENSPNYG00000009518	pum1	100	81.446	Pundamilia_nyererei
ENSOARG00000001899	PUM1	100	92.995	ENSPNAG00000026728	pum1	95	92.995	Pygocentrus_nattereri
ENSOARG00000001899	PUM1	100	99.272	ENSRNOG00000011709	Pum1	100	97.729	Rattus_norvegicus
ENSOARG00000001899	PUM1	100	99.758	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSOARG00000001899	PUM1	100	99.757	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSOARG00000001899	PUM1	100	99.549	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSOARG00000001899	PUM1	100	97.826	ENSSHAG00000010918	PUM1	100	96.725	Sarcophilus_harrisii
ENSOARG00000001899	PUM1	100	91.566	ENSSMAG00000010918	pum1	100	91.084	Scophthalmus_maximus
ENSOARG00000001899	PUM1	100	91.566	ENSSDUG00000009021	pum1	94	91.084	Seriola_dumerili
ENSOARG00000001899	PUM1	95	91.566	ENSSLDG00000009667	pum1	93	91.084	Seriola_lalandi_dorsalis
ENSOARG00000001899	PUM1	94	100.000	ENSSARG00000003055	PUM1	91	100.000	Sorex_araneus
ENSOARG00000001899	PUM1	100	98.551	ENSSPUG00000006267	PUM1	100	96.215	Sphenodon_punctatus
ENSOARG00000001899	PUM1	90	91.566	ENSSPAG00000016636	pum1	100	91.084	Stegastes_partitus
ENSOARG00000001899	PUM1	100	100.000	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSOARG00000001899	PUM1	100	91.566	ENSTRUG00000013121	pum1	94	91.084	Takifugu_rubripes
ENSOARG00000001899	PUM1	100	91.346	ENSTNIG00000016983	pum1	93	90.865	Tetraodon_nigroviridis
ENSOARG00000001899	PUM1	93	95.122	ENSTBEG00000013810	PUM1	89	95.122	Tupaia_belangeri
ENSOARG00000001899	PUM1	92	98.633	ENSTTRG00000007436	PUM1	90	98.633	Tursiops_truncatus
ENSOARG00000001899	PUM1	99	99.026	ENSUAMG00000018262	-	100	97.972	Ursus_americanus
ENSOARG00000001899	PUM1	100	100.000	ENSUMAG00000009211	PUM1	100	100.000	Ursus_maritimus
ENSOARG00000001899	PUM1	92	99.661	ENSVPAG00000005902	PUM1	92	99.661	Vicugna_pacos
ENSOARG00000001899	PUM1	100	100.000	ENSVVUG00000014631	PUM1	100	99.369	Vulpes_vulpes
ENSOARG00000001899	PUM1	100	89.130	ENSXETG00000012904	pum1	99	85.810	Xenopus_tropicalis
ENSOARG00000001899	PUM1	100	73.118	ENSXMAG00000002945	pum1	100	77.226	Xiphophorus_maculatus