EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000002149 (Gene tree)
Gene ID: -
Gene Symbol: SND1
Alias: -
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 419954 bases
Position: chr4:91948779-92368732
Accession: 101103642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000002279	TUDOR	PF00567.24	9.6e-28	1	1
ENSOARP00000002279	SNase	PF00565.17	3.7e-62	1	5
ENSOARP00000002279	SNase	PF00565.17	3.7e-62	2	5
ENSOARP00000002279	SNase	PF00565.17	3.7e-62	3	5
ENSOARP00000002279	SNase	PF00565.17	3.7e-62	4	5
ENSOARP00000002279	SNase	PF00565.17	3.7e-62	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000002330	SND1-201	2658	XM_004008276	ENSOARP00000002279	885 (aa)	-	W5NVT3

Gene Model

Click here to download ENSOARG00000002149's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000002149's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000002149	SND1	100	96.158	ENSG00000197157	SND1	100	97.297	Homo_sapiens
ENSOARG00000002149	SND1	100	82.638	ENSAPOG00000017599	snd1	97	82.638	Acanthochromis_polyacanthus
ENSOARG00000002149	SND1	100	95.941	ENSAMEG00000004664	SND1	92	95.941	Ailuropoda_melanoleuca
ENSOARG00000002149	SND1	100	79.797	ENSACIG00000003551	snd1	97	79.797	Amphilophus_citrinellus
ENSOARG00000002149	SND1	100	82.413	ENSAOCG00000014166	snd1	97	82.413	Amphiprion_ocellaris
ENSOARG00000002149	SND1	100	82.413	ENSAPEG00000007067	snd1	97	82.413	Amphiprion_percula
ENSOARG00000002149	SND1	98	81.839	ENSATEG00000018475	snd1	87	81.839	Anabas_testudineus
ENSOARG00000002149	SND1	100	96.271	ENSANAG00000034463	SND1	99	96.267	Aotus_nancymaae
ENSOARG00000002149	SND1	100	82.074	ENSACLG00000022897	snd1	97	82.074	Astatotilapia_calliptera
ENSOARG00000002149	SND1	100	82.452	ENSAMXG00000016318	snd1	97	82.452	Astyanax_mexicanus
ENSOARG00000002149	SND1	100	96.723	ENSBTAG00000010692	SND1	97	96.723	Bos_taurus
ENSOARG00000002149	SND1	99	45.161	WBGene00006626	tsn-1	97	45.273	Caenorhabditis_elegans
ENSOARG00000002149	SND1	100	96.045	ENSCJAG00000017668	SND1	99	96.041	Callithrix_jacchus
ENSOARG00000002149	SND1	100	96.384	ENSCAFG00000001700	SND1	97	96.384	Canis_familiaris
ENSOARG00000002149	SND1	100	96.384	ENSCAFG00020021639	SND1	97	96.384	Canis_lupus_dingo
ENSOARG00000002149	SND1	100	96.949	ENSCHIG00000023390	SND1	98	96.946	Capra_hircus
ENSOARG00000002149	SND1	75	98.944	ENSTSYG00000004979	SND1	96	98.944	Carlito_syrichta
ENSOARG00000002149	SND1	99	83.070	ENSCAPG00000010677	SND1	97	83.070	Cavia_aperea
ENSOARG00000002149	SND1	100	95.593	ENSCPOG00000006251	SND1	97	95.593	Cavia_porcellus
ENSOARG00000002149	SND1	100	96.384	ENSCCAG00000036847	SND1	98	96.380	Cebus_capucinus
ENSOARG00000002149	SND1	100	96.271	ENSCATG00000035214	SND1	99	96.267	Cercocebus_atys
ENSOARG00000002149	SND1	100	95.819	ENSCLAG00000011796	SND1	94	99.297	Chinchilla_lanigera
ENSOARG00000002149	SND1	100	96.271	ENSCSAG00000010182	SND1	97	96.271	Chlorocebus_sabaeus
ENSOARG00000002149	SND1	78	90.196	ENSCHOG00000002218	SND1	86	90.196	Choloepus_hoffmanni
ENSOARG00000002149	SND1	100	90.508	ENSCPBG00000018094	SND1	97	90.508	Chrysemys_picta_bellii
ENSOARG00000002149	SND1	100	55.345	ENSCING00000000524	-	97	55.345	Ciona_intestinalis
ENSOARG00000002149	SND1	100	56.117	ENSCSAVG00000008807	-	97	56.117	Ciona_savignyi
ENSOARG00000002149	SND1	100	96.271	ENSCANG00000035119	SND1	97	96.271	Colobus_angolensis_palliatus
ENSOARG00000002149	SND1	100	94.802	ENSCGRG00001022514	Snd1	97	94.802	Cricetulus_griseus_chok1gshd
ENSOARG00000002149	SND1	99	94.796	ENSCGRG00000012277	Snd1	99	94.796	Cricetulus_griseus_crigri
ENSOARG00000002149	SND1	100	81.962	ENSCSEG00000008661	snd1	97	81.962	Cynoglossus_semilaevis
ENSOARG00000002149	SND1	100	83.089	ENSCVAG00000010316	snd1	100	81.494	Cyprinodon_variegatus
ENSOARG00000002149	SND1	100	83.221	ENSDARG00000006766	snd1	95	87.890	Danio_rerio
ENSOARG00000002149	SND1	100	93.123	ENSDNOG00000006795	SND1	100	93.123	Dasypus_novemcinctus
ENSOARG00000002149	SND1	100	96.158	ENSDORG00000000336	Snd1	97	96.158	Dipodomys_ordii
ENSOARG00000002149	SND1	99	48.955	FBgn0035121	Tudor-SN	97	48.955	Drosophila_melanogaster
ENSOARG00000002149	SND1	92	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSOARG00000002149	SND1	62	65.879	ENSEBUG00000014201	-	84	75.956	Eptatretus_burgeri
ENSOARG00000002149	SND1	100	94.562	ENSEASG00005008513	SND1	97	94.562	Equus_asinus_asinus
ENSOARG00000002149	SND1	100	96.158	ENSECAG00000011451	SND1	97	96.158	Equus_caballus
ENSOARG00000002149	SND1	100	86.441	ENSEEUG00000014737	SND1	97	86.441	Erinaceus_europaeus
ENSOARG00000002149	SND1	99	80.834	ENSELUG00000001805	snd1	94	80.834	Esox_lucius
ENSOARG00000002149	SND1	100	96.271	ENSFCAG00000008289	SND1	97	96.271	Felis_catus
ENSOARG00000002149	SND1	100	95.932	ENSFDAG00000015881	SND1	97	95.932	Fukomys_damarensis
ENSOARG00000002149	SND1	100	80.706	ENSFHEG00000004093	snd1	96	82.374	Fundulus_heteroclitus
ENSOARG00000002149	SND1	63	68.644	ENSGMOG00000018932	snd1	63	68.644	Gadus_morhua
ENSOARG00000002149	SND1	100	82.976	ENSGAFG00000008421	snd1	99	82.864	Gambusia_affinis
ENSOARG00000002149	SND1	100	52.121	ENSGACG00000019793	snd1	97	52.121	Gasterosteus_aculeatus
ENSOARG00000002149	SND1	100	96.271	ENSGGOG00000009614	SND1	99	96.267	Gorilla_gorilla
ENSOARG00000002149	SND1	100	82.074	ENSHBUG00000019135	snd1	98	82.074	Haplochromis_burtoni
ENSOARG00000002149	SND1	100	95.480	ENSHGLG00000003618	SND1	94	98.770	Heterocephalus_glaber_female
ENSOARG00000002149	SND1	100	95.480	ENSHGLG00100012449	SND1	98	95.480	Heterocephalus_glaber_male
ENSOARG00000002149	SND1	100	81.623	ENSHCOG00000005266	snd1	97	81.623	Hippocampus_comes
ENSOARG00000002149	SND1	100	81.327	ENSIPUG00000013279	snd1	97	81.327	Ictalurus_punctatus
ENSOARG00000002149	SND1	100	96.045	ENSSTOG00000002140	SND1	97	96.045	Ictidomys_tridecemlineatus
ENSOARG00000002149	SND1	100	96.384	ENSJJAG00000009561	Snd1	97	96.384	Jaculus_jaculus
ENSOARG00000002149	SND1	100	82.525	ENSKMAG00000016997	snd1	97	82.525	Kryptolebias_marmoratus
ENSOARG00000002149	SND1	100	85.764	ENSLBEG00000013563	snd1	97	81.172	Labrus_bergylta
ENSOARG00000002149	SND1	100	83.128	ENSLOCG00000015537	snd1	97	83.128	Lepisosteus_oculatus
ENSOARG00000002149	SND1	100	95.480	ENSLAFG00000009696	SND1	97	95.480	Loxodonta_africana
ENSOARG00000002149	SND1	100	96.271	ENSMFAG00000038114	SND1	99	96.267	Macaca_fascicularis
ENSOARG00000002149	SND1	100	96.271	ENSMMUG00000015432	SND1	97	96.271	Macaca_mulatta
ENSOARG00000002149	SND1	100	96.271	ENSMNEG00000039808	SND1	97	99.646	Macaca_nemestrina
ENSOARG00000002149	SND1	100	96.271	ENSMLEG00000029040	SND1	97	99.646	Mandrillus_leucophaeus
ENSOARG00000002149	SND1	100	82.187	ENSMAMG00000011739	snd1	97	82.187	Mastacembelus_armatus
ENSOARG00000002149	SND1	100	82.074	ENSMZEG00005005681	snd1	97	82.074	Maylandia_zebra
ENSOARG00000002149	SND1	100	96.045	ENSMICG00000000097	SND1	97	96.045	Microcebus_murinus
ENSOARG00000002149	SND1	100	95.367	ENSMOCG00000005040	Snd1	97	95.367	Microtus_ochrogaster
ENSOARG00000002149	SND1	100	82.187	ENSMMOG00000001795	snd1	97	82.187	Mola_mola
ENSOARG00000002149	SND1	100	93.446	ENSMODG00000015182	SND1	97	93.446	Monodelphis_domestica
ENSOARG00000002149	SND1	100	81.736	ENSMALG00000012071	snd1	97	81.736	Monopterus_albus
ENSOARG00000002149	SND1	100	95.254	MGP_CAROLIEiJ_G0028159	Snd1	96	97.731	Mus_caroli
ENSOARG00000002149	SND1	100	95.028	ENSMUSG00000001424	Snd1	97	95.028	Mus_musculus
ENSOARG00000002149	SND1	100	95.254	MGP_PahariEiJ_G0021917	Snd1	96	98.239	Mus_pahari
ENSOARG00000002149	SND1	100	95.254	MGP_SPRETEiJ_G0029159	Snd1	97	95.254	Mus_spretus
ENSOARG00000002149	SND1	100	96.045	ENSMPUG00000006545	SND1	97	96.045	Mustela_putorius_furo
ENSOARG00000002149	SND1	99	94.302	ENSMLUG00000017130	SND1	99	94.302	Myotis_lucifugus
ENSOARG00000002149	SND1	100	95.367	ENSNGAG00000011186	Snd1	97	95.367	Nannospalax_galili
ENSOARG00000002149	SND1	100	81.962	ENSNBRG00000006681	snd1	97	81.962	Neolamprologus_brichardi
ENSOARG00000002149	SND1	100	96.271	ENSNLEG00000012263	SND1	100	96.271	Nomascus_leucogenys
ENSOARG00000002149	SND1	92	100.000	ENSOPRG00000013405	SND1	90	100.000	Ochotona_princeps
ENSOARG00000002149	SND1	100	96.045	ENSODEG00000011502	SND1	97	96.045	Octodon_degus
ENSOARG00000002149	SND1	100	81.962	ENSONIG00000011481	snd1	95	81.962	Oreochromis_niloticus
ENSOARG00000002149	SND1	99	92.308	ENSOANG00000000817	SND1	97	92.308	Ornithorhynchus_anatinus
ENSOARG00000002149	SND1	100	94.915	ENSOCUG00000001620	SND1	97	94.915	Oryctolagus_cuniculus
ENSOARG00000002149	SND1	100	81.623	ENSORLG00000015201	snd1	97	81.623	Oryzias_latipes
ENSOARG00000002149	SND1	100	81.736	ENSORLG00020013991	snd1	97	81.736	Oryzias_latipes_hni
ENSOARG00000002149	SND1	100	81.736	ENSORLG00015012436	snd1	97	81.736	Oryzias_latipes_hsok
ENSOARG00000002149	SND1	100	81.962	ENSOMEG00000006406	snd1	97	81.962	Oryzias_melastigma
ENSOARG00000002149	SND1	100	95.716	ENSOGAG00000013356	SND1	92	95.716	Otolemur_garnettii
ENSOARG00000002149	SND1	100	96.158	ENSPPAG00000042947	SND1	99	96.154	Pan_paniscus
ENSOARG00000002149	SND1	100	96.271	ENSPPRG00000004494	SND1	97	96.271	Panthera_pardus
ENSOARG00000002149	SND1	100	96.158	ENSPTIG00000014214	SND1	97	96.158	Panthera_tigris_altaica
ENSOARG00000002149	SND1	100	96.158	ENSPTRG00000023911	SND1	99	96.154	Pan_troglodytes
ENSOARG00000002149	SND1	99	96.267	ENSPANG00000011997	SND1	99	96.267	Papio_anubis
ENSOARG00000002149	SND1	100	79.642	ENSPKIG00000023494	snd1	97	79.642	Paramormyrops_kingsleyae
ENSOARG00000002149	SND1	94	80.719	ENSPMGG00000003629	snd1	100	80.719	Periophthalmus_magnuspinnatus
ENSOARG00000002149	SND1	100	95.593	ENSPEMG00000010240	Snd1	97	95.593	Peromyscus_maniculatus_bairdii
ENSOARG00000002149	SND1	99	71.638	ENSPMAG00000007915	-	99	71.638	Petromyzon_marinus
ENSOARG00000002149	SND1	100	94.011	ENSPCIG00000011561	SND1	97	94.011	Phascolarctos_cinereus
ENSOARG00000002149	SND1	100	82.413	ENSPFOG00000001557	snd1	97	82.413	Poecilia_formosa
ENSOARG00000002149	SND1	100	82.413	ENSPLAG00000018459	snd1	95	82.413	Poecilia_latipinna
ENSOARG00000002149	SND1	100	82.864	ENSPMEG00000006803	snd1	97	82.864	Poecilia_mexicana
ENSOARG00000002149	SND1	100	82.751	ENSPREG00000002189	snd1	97	82.751	Poecilia_reticulata
ENSOARG00000002149	SND1	93	95.775	ENSPPYG00000017972	SND1	97	95.775	Pongo_abelii
ENSOARG00000002149	SND1	100	83.616	ENSPCAG00000011305	SND1	97	83.616	Procavia_capensis
ENSOARG00000002149	SND1	100	96.158	ENSPCOG00000026791	SND1	100	96.158	Propithecus_coquereli
ENSOARG00000002149	SND1	100	94.011	ENSPVAG00000013945	SND1	97	94.011	Pteropus_vampyrus
ENSOARG00000002149	SND1	100	82.074	ENSPNYG00000000932	snd1	97	82.074	Pundamilia_nyererei
ENSOARG00000002149	SND1	100	82.340	ENSPNAG00000001206	snd1	97	82.340	Pygocentrus_nattereri
ENSOARG00000002149	SND1	100	94.915	ENSRNOG00000031173	Snd1	100	93.559	Rattus_norvegicus
ENSOARG00000002149	SND1	75	99.248	ENSRBIG00000027782	-	93	99.430	Rhinopithecus_bieti
ENSOARG00000002149	SND1	100	96.271	ENSRROG00000033020	SND1	97	96.271	Rhinopithecus_roxellana
ENSOARG00000002149	SND1	100	96.271	ENSSBOG00000032461	SND1	99	96.267	Saimiri_boliviensis_boliviensis
ENSOARG00000002149	SND1	99	91.063	ENSSHAG00000015359	SND1	99	91.063	Sarcophilus_harrisii
ENSOARG00000002149	SND1	99	81.299	ENSSFOG00015001103	snd1	97	81.299	Scleropages_formosus
ENSOARG00000002149	SND1	100	81.511	ENSSMAG00000001932	snd1	92	81.511	Scophthalmus_maximus
ENSOARG00000002149	SND1	100	82.413	ENSSDUG00000002699	snd1	91	82.413	Seriola_dumerili
ENSOARG00000002149	SND1	100	74.972	ENSSLDG00000001950	snd1	97	74.972	Seriola_lalandi_dorsalis
ENSOARG00000002149	SND1	88	99.057	ENSSARG00000004877	SND1	92	99.057	Sorex_araneus
ENSOARG00000002149	SND1	75	87.826	ENSSPUG00000017586	SND1	96	87.826	Sphenodon_punctatus
ENSOARG00000002149	SND1	75	86.340	ENSSPAG00000021398	snd1	95	86.237	Stegastes_partitus
ENSOARG00000002149	SND1	100	96.045	ENSSSCG00000016590	SND1	97	96.045	Sus_scrofa
ENSOARG00000002149	SND1	100	85.156	ENSTRUG00000014067	snd1	97	81.172	Takifugu_rubripes
ENSOARG00000002149	SND1	100	81.849	ENSTNIG00000011019	snd1	94	87.215	Tetraodon_nigroviridis
ENSOARG00000002149	SND1	96	90.094	ENSTBEG00000003999	SND1	100	90.094	Tupaia_belangeri
ENSOARG00000002149	SND1	100	91.412	ENSTTRG00000006059	SND1	97	91.412	Tursiops_truncatus
ENSOARG00000002149	SND1	70	89.722	ENSUAMG00000002820	-	83	89.722	Ursus_americanus
ENSOARG00000002149	SND1	93	94.106	ENSUAMG00000005604	-	93	94.106	Ursus_americanus
ENSOARG00000002149	SND1	100	96.271	ENSUMAG00000005960	SND1	97	96.271	Ursus_maritimus
ENSOARG00000002149	SND1	75	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSOARG00000002149	SND1	100	96.158	ENSVVUG00000007226	SND1	97	96.158	Vulpes_vulpes
ENSOARG00000002149	SND1	99	82.712	ENSXETG00000023043	snd1	100	82.609	Xenopus_tropicalis
ENSOARG00000002149	SND1	95	79.097	ENSXCOG00000013629	snd1	99	79.097	Xiphophorus_couchianus
ENSOARG00000002149	SND1	100	82.976	ENSXMAG00000011469	snd1	97	82.976	Xiphophorus_maculatus