EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000002597 (Gene tree)
Gene ID: -
Gene Symbol: CHD6
Alias: -
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 145961 bases
Position: chr13:69617188-69763148
Accession: 101104333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000002757	ResIII	PF04851.15	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000002812	CHD6-201	8106	XM_004014839	ENSOARP00000002757	2691 (aa)	-	W5NX60

Gene Model

Click here to download ENSOARG00000002597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000002597's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000002597	CHD6	72	66.188	ENSOARG00000016176	CHD7	71	63.474
ENSOARG00000002597	CHD6	56	62.500	ENSOARG00000019643	CHD8	59	62.500
ENSOARG00000002597	CHD6	78	62.109	ENSOARG00000017664	CHD9	68	65.743

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000002597	CHD6	100	86.260	ENSG00000124177	CHD6	99	100.000	Homo_sapiens
ENSOARG00000002597	CHD6	74	72.850	ENSAPOG00000013736	chd6	66	71.285	Acanthochromis_polyacanthus
ENSOARG00000002597	CHD6	100	87.459	ENSAMEG00000009496	CHD6	99	87.459	Ailuropoda_melanoleuca
ENSOARG00000002597	CHD6	71	74.800	ENSATEG00000005608	chd6	66	71.026	Anabas_testudineus
ENSOARG00000002597	CHD6	68	75.640	ENSAPLG00000015592	CHD6	99	70.059	Anas_platyrhynchos
ENSOARG00000002597	CHD6	99	64.801	ENSACAG00000006842	CHD6	99	65.630	Anolis_carolinensis
ENSOARG00000002597	CHD6	100	85.893	ENSANAG00000037548	CHD6	99	93.578	Aotus_nancymaae
ENSOARG00000002597	CHD6	81	71.879	ENSAMXG00000009576	chd6	81	68.565	Astyanax_mexicanus
ENSOARG00000002597	CHD6	100	95.000	ENSBTAG00000005733	CHD6	99	95.000	Bos_taurus
ENSOARG00000002597	CHD6	100	85.966	ENSCJAG00000017920	CHD6	99	93.394	Callithrix_jacchus
ENSOARG00000002597	CHD6	100	87.495	ENSCAFG00000009236	CHD6	99	87.422	Canis_familiaris
ENSOARG00000002597	CHD6	99	87.172	ENSCAFG00020012906	CHD6	99	94.810	Canis_lupus_dingo
ENSOARG00000002597	CHD6	100	96.764	ENSCHIG00000017606	CHD6	99	96.764	Capra_hircus
ENSOARG00000002597	CHD6	84	85.295	ENSTSYG00000014635	CHD6	100	85.252	Carlito_syrichta
ENSOARG00000002597	CHD6	100	85.147	ENSCPOG00000015641	CHD6	99	85.147	Cavia_porcellus
ENSOARG00000002597	CHD6	100	86.113	ENSCCAG00000036828	CHD6	99	93.578	Cebus_capucinus
ENSOARG00000002597	CHD6	100	85.746	ENSCATG00000039248	CHD6	99	93.578	Cercocebus_atys
ENSOARG00000002597	CHD6	100	84.923	ENSCLAG00000013743	CHD6	99	84.923	Chinchilla_lanigera
ENSOARG00000002597	CHD6	100	86.113	ENSCSAG00000013997	CHD6	99	86.076	Chlorocebus_sabaeus
ENSOARG00000002597	CHD6	91	85.356	ENSCHOG00000012647	CHD6	95	85.356	Choloepus_hoffmanni
ENSOARG00000002597	CHD6	91	80.078	ENSCPBG00000019382	CHD6	99	71.267	Chrysemys_picta_bellii
ENSOARG00000002597	CHD6	100	86.150	ENSCANG00000043435	CHD6	99	93.578	Colobus_angolensis_palliatus
ENSOARG00000002597	CHD6	100	83.824	ENSCGRG00001002694	Chd6	99	83.713	Cricetulus_griseus_chok1gshd
ENSOARG00000002597	CHD6	85	72.575	ENSDARG00000017244	chd6	80	72.575	Danio_rerio
ENSOARG00000002597	CHD6	99	84.267	ENSDNOG00000004176	CHD6	99	84.267	Dasypus_novemcinctus
ENSOARG00000002597	CHD6	99	87.579	ENSEASG00005023433	CHD6	95	97.876	Equus_asinus_asinus
ENSOARG00000002597	CHD6	100	87.500	ENSECAG00000011761	CHD6	100	87.500	Equus_caballus
ENSOARG00000002597	CHD6	65	78.099	ENSELUG00000012309	chd6	90	78.099	Esox_lucius
ENSOARG00000002597	CHD6	100	87.164	ENSFCAG00000003572	CHD6	99	87.164	Felis_catus
ENSOARG00000002597	CHD6	99	68.463	ENSFALG00000012563	CHD6	98	68.964	Ficedula_albicollis
ENSOARG00000002597	CHD6	99	85.035	ENSFDAG00000013791	CHD6	99	85.035	Fukomys_damarensis
ENSOARG00000002597	CHD6	60	68.709	ENSGMOG00000011715	chd6	84	69.665	Gadus_morhua
ENSOARG00000002597	CHD6	77	69.954	ENSGACG00000000037	chd6	92	63.518	Gasterosteus_aculeatus
ENSOARG00000002597	CHD6	100	86.297	ENSGGOG00000013123	CHD6	99	93.578	Gorilla_gorilla
ENSOARG00000002597	CHD6	77	70.110	ENSHBUG00000014701	chd6	64	74.032	Haplochromis_burtoni
ENSOARG00000002597	CHD6	100	84.895	ENSHGLG00000004548	CHD6	99	84.895	Heterocephalus_glaber_female
ENSOARG00000002597	CHD6	100	84.895	ENSHGLG00100006401	CHD6	99	84.895	Heterocephalus_glaber_male
ENSOARG00000002597	CHD6	76	76.184	ENSIPUG00000003692	chd6	78	70.386	Ictalurus_punctatus
ENSOARG00000002597	CHD6	100	85.735	ENSSTOG00000013382	CHD6	99	85.735	Ictidomys_tridecemlineatus
ENSOARG00000002597	CHD6	90	71.145	ENSLACG00000010881	CHD6	92	72.060	Latimeria_chalumnae
ENSOARG00000002597	CHD6	69	78.567	ENSLOCG00000007386	chd6	79	73.868	Lepisosteus_oculatus
ENSOARG00000002597	CHD6	100	85.630	ENSLAFG00000012144	CHD6	100	85.256	Loxodonta_africana
ENSOARG00000002597	CHD6	100	86.150	ENSMFAG00000032830	CHD6	99	93.578	Macaca_fascicularis
ENSOARG00000002597	CHD6	100	86.150	ENSMMUG00000020458	CHD6	99	93.578	Macaca_mulatta
ENSOARG00000002597	CHD6	100	86.150	ENSMNEG00000040847	CHD6	99	93.578	Macaca_nemestrina
ENSOARG00000002597	CHD6	99	86.030	ENSMLEG00000031965	CHD6	99	93.578	Mandrillus_leucophaeus
ENSOARG00000002597	CHD6	77	69.361	ENSMAMG00000013111	chd6	66	71.528	Mastacembelus_armatus
ENSOARG00000002597	CHD6	99	68.892	ENSMGAG00000001121	CHD6	99	69.479	Meleagris_gallopavo
ENSOARG00000002597	CHD6	99	85.851	ENSMICG00000016641	CHD6	99	92.844	Microcebus_murinus
ENSOARG00000002597	CHD6	89	76.641	ENSMODG00000000720	-	99	76.599	Monodelphis_domestica
ENSOARG00000002597	CHD6	100	82.390	MGP_CAROLIEiJ_G0024604	Chd6	99	92.392	Mus_caroli
ENSOARG00000002597	CHD6	100	82.537	ENSMUSG00000057133	Chd6	99	92.223	Mus_musculus
ENSOARG00000002597	CHD6	100	82.426	MGP_PahariEiJ_G0026048	Chd6	99	92.561	Mus_pahari
ENSOARG00000002597	CHD6	100	82.537	MGP_SPRETEiJ_G0025526	Chd6	99	92.308	Mus_spretus
ENSOARG00000002597	CHD6	100	86.165	ENSMPUG00000017695	CHD6	99	86.128	Mustela_putorius_furo
ENSOARG00000002597	CHD6	100	86.801	ENSMLUG00000016247	CHD6	99	86.801	Myotis_lucifugus
ENSOARG00000002597	CHD6	74	72.745	ENSNBRG00000013839	chd6	82	69.797	Neolamprologus_brichardi
ENSOARG00000002597	CHD6	99	84.865	ENSNLEG00000006496	CHD6	99	84.740	Nomascus_leucogenys
ENSOARG00000002597	CHD6	100	82.206	ENSOPRG00000013376	-	99	82.169	Ochotona_princeps
ENSOARG00000002597	CHD6	82	73.342	ENSONIG00000000393	chd6	86	73.406	Oreochromis_niloticus
ENSOARG00000002597	CHD6	100	68.682	ENSOANG00000014347	CHD6	99	69.096	Ornithorhynchus_anatinus
ENSOARG00000002597	CHD6	100	84.485	ENSOCUG00000012394	CHD6	100	84.449	Oryctolagus_cuniculus
ENSOARG00000002597	CHD6	76	70.282	ENSORLG00020021891	chd6	95	85.972	Oryzias_latipes_hni
ENSOARG00000002597	CHD6	99	84.775	ENSOGAG00000002427	CHD6	99	84.737	Otolemur_garnettii
ENSOARG00000002597	CHD6	100	87.201	ENSPPRG00000014756	CHD6	99	87.201	Panthera_pardus
ENSOARG00000002597	CHD6	100	87.091	ENSPTIG00000011094	CHD6	99	87.091	Panthera_tigris_altaica
ENSOARG00000002597	CHD6	100	86.334	ENSPTRG00000013504	CHD6	99	93.578	Pan_troglodytes
ENSOARG00000002597	CHD6	100	86.076	ENSPANG00000025554	CHD6	99	93.394	Papio_anubis
ENSOARG00000002597	CHD6	76	75.469	ENSPKIG00000005578	chd6	83	68.718	Paramormyrops_kingsleyae
ENSOARG00000002597	CHD6	77	75.641	ENSPMGG00000014877	chd6	89	75.678	Periophthalmus_magnuspinnatus
ENSOARG00000002597	CHD6	100	75.862	ENSPCIG00000028037	CHD6	99	76.302	Phascolarctos_cinereus
ENSOARG00000002597	CHD6	72	76.434	ENSPLAG00000003128	chd6	68	70.933	Poecilia_latipinna
ENSOARG00000002597	CHD6	67	80.727	ENSPREG00000022653	chd6	99	86.447	Poecilia_reticulata
ENSOARG00000002597	CHD6	100	86.522	ENSPPYG00000011016	CHD6	99	86.485	Pongo_abelii
ENSOARG00000002597	CHD6	99	86.046	ENSPCOG00000001089	CHD6	99	93.394	Propithecus_coquereli
ENSOARG00000002597	CHD6	77	73.990	ENSPNYG00000022516	chd6	83	70.175	Pundamilia_nyererei
ENSOARG00000002597	CHD6	78	72.923	ENSPNAG00000012825	chd6	76	72.563	Pygocentrus_nattereri
ENSOARG00000002597	CHD6	100	82.785	ENSRNOG00000016744	Chd6	99	82.601	Rattus_norvegicus
ENSOARG00000002597	CHD6	100	86.150	ENSSBOG00000022089	CHD6	99	93.578	Saimiri_boliviensis_boliviensis
ENSOARG00000002597	CHD6	99	75.477	ENSSHAG00000017072	CHD6	99	75.954	Sarcophilus_harrisii
ENSOARG00000002597	CHD6	78	75.230	ENSSFOG00015012920	chd6	81	72.120	Scleropages_formosus
ENSOARG00000002597	CHD6	59	99.342	ENSSARG00000002615	-	61	99.342	Sorex_araneus
ENSOARG00000002597	CHD6	100	88.346	ENSSSCG00000007360	CHD6	99	89.244	Sus_scrofa
ENSOARG00000002597	CHD6	97	70.522	ENSTGUG00000003179	CHD6	99	71.022	Taeniopygia_guttata
ENSOARG00000002597	CHD6	75	75.946	ENSTNIG00000017487	chd6	85	75.946	Tetraodon_nigroviridis
ENSOARG00000002597	CHD6	100	86.843	ENSTTRG00000013438	CHD6	99	86.806	Tursiops_truncatus
ENSOARG00000002597	CHD6	99	86.199	ENSUAMG00000024036	CHD6	95	96.332	Ursus_americanus
ENSOARG00000002597	CHD6	99	87.523	ENSUMAG00000002017	CHD6	95	96.332	Ursus_maritimus
ENSOARG00000002597	CHD6	92	91.469	ENSVPAG00000007941	CHD6	93	91.469	Vicugna_pacos
ENSOARG00000002597	CHD6	100	87.459	ENSVVUG00000029164	CHD6	99	87.459	Vulpes_vulpes
ENSOARG00000002597	CHD6	89	68.107	ENSXETG00000021445	chd6	89	68.218	Xenopus_tropicalis