EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000002642 (Gene tree)
Gene ID: 100270716
Gene Symbol: SLIRP
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 5761 bases
Position: chr7:85795918-85801678
Accession: 100270716
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000002802	RRM_1	PF00076.22	5.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000002857	-	333	-	ENSOARP00000002802	111 (aa)	-	B9VGZ7

Gene Model

Click here to download ENSOARG00000002642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000002642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000002642	SLIRP	100	75.676	ENSOARG00000016139	-	85	78.947

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000002642	SLIRP	92	89.216	ENSBTAG00000050457	-	98	89.000	Bos_taurus
ENSOARG00000002642	SLIRP	100	95.495	ENSBTAG00000008135	SLIRP	90	96.000	Bos_taurus
ENSOARG00000002642	SLIRP	90	85.000	ENSCAFG00000017230	SLIRP	100	85.586	Canis_familiaris
ENSOARG00000002642	SLIRP	90	85.000	ENSCAFG00020000852	-	100	85.586	Canis_lupus_dingo
ENSOARG00000002642	SLIRP	100	87.387	ENSCHIG00000002964	-	90	88.000	Capra_hircus
ENSOARG00000002642	SLIRP	100	97.297	ENSCHIG00000019077	-	100	97.297	Capra_hircus
ENSOARG00000002642	SLIRP	100	80.180	ENSCPOG00000001500	-	90	80.000	Cavia_porcellus
ENSOARG00000002642	SLIRP	100	79.279	ENSCLAG00000008545	-	90	78.000	Chinchilla_lanigera
ENSOARG00000002642	SLIRP	81	63.333	ENSDNOG00000041397	-	82	63.333	Dasypus_novemcinctus
ENSOARG00000002642	SLIRP	100	87.387	ENSECAG00000000712	SLIRP	90	88.000	Equus_caballus
ENSOARG00000002642	SLIRP	89	78.788	ENSJJAG00000018723	-	100	77.477	Jaculus_jaculus
ENSOARG00000002642	SLIRP	100	77.477	MGP_PahariEiJ_G0029754	-	90	79.000	Mus_pahari
ENSOARG00000002642	SLIRP	90	80.000	ENSMLUG00000022403	-	100	79.279	Myotis_lucifugus
ENSOARG00000002642	SLIRP	100	78.378	ENSOPRG00000007560	-	90	80.000	Ochotona_princeps
ENSOARG00000002642	SLIRP	100	85.586	ENSOCUG00000009713	-	90	88.000	Oryctolagus_cuniculus
ENSOARG00000002642	SLIRP	90	67.000	ENSOGAG00000027580	-	99	67.568	Otolemur_garnettii
ENSOARG00000002642	SLIRP	86	61.458	ENSPCAG00000004290	-	100	61.261	Procavia_capensis
ENSOARG00000002642	SLIRP	70	80.769	ENSPVAG00000006420	-	70	80.769	Pteropus_vampyrus
ENSOARG00000002642	SLIRP	100	79.279	ENSRNOG00000012314	Slirp	90	81.000	Rattus_norvegicus
ENSOARG00000002642	SLIRP	100	85.586	ENSTBEG00000013979	-	100	85.586	Tupaia_belangeri
ENSOARG00000002642	SLIRP	70	92.308	ENSTTRG00000009328	-	100	77.477	Tursiops_truncatus