EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000003117 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6
Alias: -
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 7853 bases
Position: chr13:71666855-71674707
Accession: 101106704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000003319	RRM_1	PF00076.22	7.7e-30	1	2
ENSOARP00000003319	RRM_1	PF00076.22	7.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000003382	SRSF6-201	1032	XM_004014575	ENSOARP00000003319	343 (aa)	-	W5NYS1

Gene Model

Click here to download ENSOARG00000003117's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03040	Spliceosome	KEGG
oas05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000003117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000003117	SRSF6	57	37.073	ENSOARG00000008323	SRSF1	77	41.546
ENSOARG00000003117	SRSF6	65	36.087	ENSOARG00000012402	SRSF9	70	42.373
ENSOARG00000003117	SRSF6	100	67.442	ENSOARG00000017944	-	100	67.442

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000003117	SRSF6	94	93.538	ENSG00000124193	SRSF6	93	93.789	Homo_sapiens
ENSOARG00000003117	SRSF6	94	88.923	ENSAMEG00000003710	SRSF6	93	88.545	Ailuropoda_melanoleuca
ENSOARG00000003117	SRSF6	76	68.702	ENSACIG00000020091	-	95	77.165	Amphilophus_citrinellus
ENSOARG00000003117	SRSF6	53	82.418	ENSAOCG00000004309	-	57	81.967	Amphiprion_ocellaris
ENSOARG00000003117	SRSF6	65	68.398	ENSAPEG00000020746	-	66	78.191	Amphiprion_percula
ENSOARG00000003117	SRSF6	53	84.865	ENSAPEG00000013086	-	53	81.250	Amphiprion_percula
ENSOARG00000003117	SRSF6	52	77.957	ENSATEG00000007255	-	71	77.838	Anabas_testudineus
ENSOARG00000003117	SRSF6	94	78.769	ENSACAG00000002061	SRSF6	92	81.308	Anolis_carolinensis
ENSOARG00000003117	SRSF6	94	92.615	ENSANAG00000024080	SRSF6	93	92.857	Aotus_nancymaae
ENSOARG00000003117	SRSF6	53	80.645	ENSAMXG00000042692	-	96	76.296	Astyanax_mexicanus
ENSOARG00000003117	SRSF6	52	80.108	ENSAMXG00000003101	-	51	80.526	Astyanax_mexicanus
ENSOARG00000003117	SRSF6	93	95.652	ENSBTAG00000008527	SRSF6	93	95.652	Bos_taurus
ENSOARG00000003117	SRSF6	54	91.979	ENSCJAG00000048403	SRSF6	69	91.979	Callithrix_jacchus
ENSOARG00000003117	SRSF6	94	95.679	ENSCAFG00000009289	SRSF6	93	95.652	Canis_familiaris
ENSOARG00000003117	SRSF6	94	95.679	ENSCAFG00020013559	SRSF6	93	95.652	Canis_lupus_dingo
ENSOARG00000003117	SRSF6	94	95.370	ENSCHIG00000009148	-	93	95.342	Capra_hircus
ENSOARG00000003117	SRSF6	100	95.942	ENSCHIG00000015890	-	100	95.942	Capra_hircus
ENSOARG00000003117	SRSF6	100	83.382	ENSTSYG00000026476	SRSF6	100	83.673	Carlito_syrichta
ENSOARG00000003117	SRSF6	94	75.926	ENSCPOG00000011761	SRSF6	56	93.333	Cavia_porcellus
ENSOARG00000003117	SRSF6	94	66.154	ENSCCAG00000018540	-	62	81.818	Cebus_capucinus
ENSOARG00000003117	SRSF6	94	92.923	ENSCCAG00000026018	-	93	93.168	Cebus_capucinus
ENSOARG00000003117	SRSF6	94	93.519	ENSCATG00000030794	SRSF6	93	93.478	Cercocebus_atys
ENSOARG00000003117	SRSF6	94	92.901	ENSCLAG00000010247	SRSF6	94	92.857	Chinchilla_lanigera
ENSOARG00000003117	SRSF6	94	93.519	ENSCSAG00000014022	SRSF6	93	93.478	Chlorocebus_sabaeus
ENSOARG00000003117	SRSF6	86	97.222	ENSCHOG00000000561	SRSF6	86	97.222	Choloepus_hoffmanni
ENSOARG00000003117	SRSF6	53	87.766	ENSCPBG00000018200	SRSF6	93	81.846	Chrysemys_picta_bellii
ENSOARG00000003117	SRSF6	94	93.210	ENSCANG00000037774	-	93	93.168	Colobus_angolensis_palliatus
ENSOARG00000003117	SRSF6	100	83.090	ENSCANG00000042529	-	100	83.382	Colobus_angolensis_palliatus
ENSOARG00000003117	SRSF6	94	93.827	ENSCGRG00001022339	Srsf6	94	93.789	Cricetulus_griseus_chok1gshd
ENSOARG00000003117	SRSF6	57	96.410	ENSCGRG00000006618	Srsf6	91	96.891	Cricetulus_griseus_crigri
ENSOARG00000003117	SRSF6	53	80.749	ENSDARG00000016783	srsf6b	79	86.667	Danio_rerio
ENSOARG00000003117	SRSF6	94	92.284	ENSDNOG00000008410	SRSF6	93	92.547	Dasypus_novemcinctus
ENSOARG00000003117	SRSF6	94	93.538	ENSDORG00000028378	Srsf6	94	93.789	Dipodomys_ordii
ENSOARG00000003117	SRSF6	93	91.223	ENSETEG00000006221	SRSF6	93	90.654	Echinops_telfairi
ENSOARG00000003117	SRSF6	100	95.072	ENSEASG00005023429	SRSF6	100	95.072	Equus_asinus_asinus
ENSOARG00000003117	SRSF6	100	95.072	ENSECAG00000023932	SRSF6	100	95.072	Equus_caballus
ENSOARG00000003117	SRSF6	57	95.385	ENSEEUG00000002324	SRSF6	89	95.385	Erinaceus_europaeus
ENSOARG00000003117	SRSF6	65	68.610	ENSELUG00000013506	SRSF6	67	84.000	Esox_lucius
ENSOARG00000003117	SRSF6	94	95.679	ENSFCAG00000032814	SRSF6	93	95.652	Felis_catus
ENSOARG00000003117	SRSF6	94	81.056	ENSFDAG00000012191	SRSF6	93	80.312	Fukomys_damarensis
ENSOARG00000003117	SRSF6	87	68.977	ENSFHEG00000023065	srsf6a	55	84.699	Fundulus_heteroclitus
ENSOARG00000003117	SRSF6	52	78.333	ENSGMOG00000014458	srsf6a	52	75.521	Gadus_morhua
ENSOARG00000003117	SRSF6	93	79.268	ENSGALG00000000990	SRSF6	56	92.000	Gallus_gallus
ENSOARG00000003117	SRSF6	87	57.988	ENSGACG00000006084	srsf6a	53	80.108	Gasterosteus_aculeatus
ENSOARG00000003117	SRSF6	53	87.766	ENSGAGG00000003238	SRSF6	93	81.846	Gopherus_agassizii
ENSOARG00000003117	SRSF6	94	93.538	ENSGGOG00000009808	SRSF6	93	93.789	Gorilla_gorilla
ENSOARG00000003117	SRSF6	63	70.925	ENSHBUG00000006386	-	58	82.514	Haplochromis_burtoni
ENSOARG00000003117	SRSF6	90	72.611	ENSHGLG00000007701	-	58	72.193	Heterocephalus_glaber_female
ENSOARG00000003117	SRSF6	94	92.901	ENSHGLG00000007348	SRSF6	94	92.857	Heterocephalus_glaber_female
ENSOARG00000003117	SRSF6	94	81.366	ENSHGLG00100005043	SRSF6	93	80.625	Heterocephalus_glaber_male
ENSOARG00000003117	SRSF6	53	80.769	ENSHCOG00000002740	srsf6a	57	80.874	Hippocampus_comes
ENSOARG00000003117	SRSF6	53	84.153	ENSIPUG00000004776	-	72	72.523	Ictalurus_punctatus
ENSOARG00000003117	SRSF6	94	92.923	ENSSTOG00000010866	SRSF6	94	93.168	Ictidomys_tridecemlineatus
ENSOARG00000003117	SRSF6	56	94.301	ENSJJAG00000020690	Srsf6	90	93.264	Jaculus_jaculus
ENSOARG00000003117	SRSF6	87	65.000	ENSKMAG00000011934	srsf6a	59	83.060	Kryptolebias_marmoratus
ENSOARG00000003117	SRSF6	52	82.609	ENSLBEG00000007356	srsf6a	52	82.258	Labrus_bergylta
ENSOARG00000003117	SRSF6	100	75.424	ENSLACG00000005466	SRSF6	100	69.801	Latimeria_chalumnae
ENSOARG00000003117	SRSF6	70	96.653	ENSLAFG00000006682	SRSF6	90	96.970	Loxodonta_africana
ENSOARG00000003117	SRSF6	94	93.519	ENSMFAG00000036925	SRSF6	93	93.478	Macaca_fascicularis
ENSOARG00000003117	SRSF6	94	93.519	ENSMMUG00000006742	SRSF6	93	93.478	Macaca_mulatta
ENSOARG00000003117	SRSF6	94	92.901	ENSMNEG00000027392	-	93	92.857	Macaca_nemestrina
ENSOARG00000003117	SRSF6	93	92.236	ENSMNEG00000038270	-	93	92.236	Macaca_nemestrina
ENSOARG00000003117	SRSF6	63	96.759	ENSMLEG00000031524	SRSF6	100	96.759	Mandrillus_leucophaeus
ENSOARG00000003117	SRSF6	53	84.324	ENSMAMG00000017161	srsf6a	53	80.729	Mastacembelus_armatus
ENSOARG00000003117	SRSF6	62	69.130	ENSMZEG00005008032	-	57	82.514	Maylandia_zebra
ENSOARG00000003117	SRSF6	52	81.111	ENSMZEG00005020658	-	60	79.444	Maylandia_zebra
ENSOARG00000003117	SRSF6	94	93.538	ENSMICG00000008537	SRSF6	93	93.789	Microcebus_murinus
ENSOARG00000003117	SRSF6	57	96.410	ENSMOCG00000018738	Srsf6	91	96.891	Microtus_ochrogaster
ENSOARG00000003117	SRSF6	53	89.247	ENSMODG00000003107	SRSF6	94	82.353	Monodelphis_domestica
ENSOARG00000003117	SRSF6	94	92.901	MGP_CAROLIEiJ_G0024606	Srsf6	94	92.857	Mus_caroli
ENSOARG00000003117	SRSF6	94	93.210	ENSMUSG00000016921	Srsf6	94	93.168	Mus_musculus
ENSOARG00000003117	SRSF6	94	93.210	MGP_PahariEiJ_G0026050	Srsf6	94	92.857	Mus_pahari
ENSOARG00000003117	SRSF6	94	93.210	MGP_SPRETEiJ_G0025528	Srsf6	94	93.168	Mus_spretus
ENSOARG00000003117	SRSF6	54	93.048	ENSMPUG00000017692	SRSF6	65	93.048	Mustela_putorius_furo
ENSOARG00000003117	SRSF6	93	81.459	ENSMLUG00000016618	SRSF6	93	78.098	Myotis_lucifugus
ENSOARG00000003117	SRSF6	94	91.667	ENSNGAG00000017560	Srsf6	94	90.994	Nannospalax_galili
ENSOARG00000003117	SRSF6	94	93.538	ENSNLEG00000006524	SRSF6	93	93.789	Nomascus_leucogenys
ENSOARG00000003117	SRSF6	53	89.247	ENSMEUG00000014615	SRSF6	62	87.766	Notamacropus_eugenii
ENSOARG00000003117	SRSF6	76	96.911	ENSOPRG00000002017	-	100	96.911	Ochotona_princeps
ENSOARG00000003117	SRSF6	53	81.522	ENSONIG00000020247	-	53	82.609	Oreochromis_niloticus
ENSOARG00000003117	SRSF6	84	84.407	ENSOCUG00000009785	-	98	85.085	Oryctolagus_cuniculus
ENSOARG00000003117	SRSF6	73	54.762	ENSOCUG00000023999	-	70	57.222	Oryctolagus_cuniculus
ENSOARG00000003117	SRSF6	94	92.923	ENSOGAG00000014468	SRSF6	93	93.168	Otolemur_garnettii
ENSOARG00000003117	SRSF6	90	81.290	ENSPPAG00000043131	-	100	82.051	Pan_paniscus
ENSOARG00000003117	SRSF6	94	93.231	ENSPPAG00000034327	-	93	93.478	Pan_paniscus
ENSOARG00000003117	SRSF6	94	95.679	ENSPPRG00000008917	SRSF6	93	95.652	Panthera_pardus
ENSOARG00000003117	SRSF6	63	99.074	ENSPTIG00000019153	SRSF6	100	99.074	Panthera_tigris_altaica
ENSOARG00000003117	SRSF6	94	93.231	ENSPTRG00000044686	-	93	93.478	Pan_troglodytes
ENSOARG00000003117	SRSF6	90	81.290	ENSPTRG00000046274	-	100	82.051	Pan_troglodytes
ENSOARG00000003117	SRSF6	94	93.519	ENSPANG00000035224	SRSF6	93	93.478	Papio_anubis
ENSOARG00000003117	SRSF6	100	64.756	ENSPKIG00000018463	-	74	89.333	Paramormyrops_kingsleyae
ENSOARG00000003117	SRSF6	51	70.652	ENSPKIG00000015703	-	95	58.784	Paramormyrops_kingsleyae
ENSOARG00000003117	SRSF6	89	69.677	ENSPMGG00000014963	srsf6a	55	85.326	Periophthalmus_magnuspinnatus
ENSOARG00000003117	SRSF6	53	89.247	ENSPCIG00000003820	SRSF6	94	82.043	Phascolarctos_cinereus
ENSOARG00000003117	SRSF6	53	87.931	ENSPFOG00000006437	srsf6a	50	80.208	Poecilia_formosa
ENSOARG00000003117	SRSF6	87	63.522	ENSPLAG00000009243	srsf6a	80	76.378	Poecilia_latipinna
ENSOARG00000003117	SRSF6	53	83.152	ENSPMEG00000006042	SRSF6	54	80.208	Poecilia_mexicana
ENSOARG00000003117	SRSF6	94	93.538	ENSPPYG00000011019	SRSF6	93	93.789	Pongo_abelii
ENSOARG00000003117	SRSF6	53	91.351	ENSPCAG00000010954	SRSF6	56	91.444	Procavia_capensis
ENSOARG00000003117	SRSF6	94	93.846	ENSPCOG00000026364	SRSF6	93	94.099	Propithecus_coquereli
ENSOARG00000003117	SRSF6	94	92.901	ENSPVAG00000015232	SRSF6	93	92.857	Pteropus_vampyrus
ENSOARG00000003117	SRSF6	94	93.210	ENSRNOG00000006380	Srsf6	94	93.168	Rattus_norvegicus
ENSOARG00000003117	SRSF6	93	93.146	ENSRBIG00000041414	SRSF6	93	93.458	Rhinopithecus_bieti
ENSOARG00000003117	SRSF6	94	93.519	ENSRROG00000029989	SRSF6	93	93.478	Rhinopithecus_roxellana
ENSOARG00000003117	SRSF6	93	66.978	ENSSBOG00000034078	-	54	70.000	Saimiri_boliviensis_boliviensis
ENSOARG00000003117	SRSF6	94	92.615	ENSSBOG00000033708	-	93	92.857	Saimiri_boliviensis_boliviensis
ENSOARG00000003117	SRSF6	53	89.247	ENSSHAG00000012805	SRSF6	94	82.353	Sarcophilus_harrisii
ENSOARG00000003117	SRSF6	89	63.501	ENSSFOG00015019681	-	53	79.793	Scleropages_formosus
ENSOARG00000003117	SRSF6	52	76.243	ENSSMAG00000017447	-	55	75.956	Scophthalmus_maximus
ENSOARG00000003117	SRSF6	53	84.324	ENSSDUG00000016097	srsf6a	53	80.729	Seriola_dumerili
ENSOARG00000003117	SRSF6	53	84.324	ENSSLDG00000022841	srsf6a	54	80.729	Seriola_lalandi_dorsalis
ENSOARG00000003117	SRSF6	76	97.297	ENSSARG00000001602	SRSF6	100	97.297	Sorex_araneus
ENSOARG00000003117	SRSF6	53	89.011	ENSSPUG00000004967	SRSF6	93	85.981	Sphenodon_punctatus
ENSOARG00000003117	SRSF6	75	65.926	ENSSPAG00000002362	srsf6a	67	80.729	Stegastes_partitus
ENSOARG00000003117	SRSF6	94	95.062	ENSSSCG00000007362	SRSF6	96	95.156	Sus_scrofa
ENSOARG00000003117	SRSF6	93	82.154	ENSTGUG00000003455	SRSF6	54	87.234	Taeniopygia_guttata
ENSOARG00000003117	SRSF6	87	68.647	ENSTNIG00000001692	srsf6a	57	82.796	Tetraodon_nigroviridis
ENSOARG00000003117	SRSF6	85	84.950	ENSTBEG00000013448	SRSF6	92	89.041	Tupaia_belangeri
ENSOARG00000003117	SRSF6	76	98.456	ENSTTRG00000015410	SRSF6	100	98.456	Tursiops_truncatus
ENSOARG00000003117	SRSF6	94	95.679	ENSUAMG00000003559	SRSF6	93	95.652	Ursus_americanus
ENSOARG00000003117	SRSF6	63	99.074	ENSUMAG00000001154	SRSF6	100	99.074	Ursus_maritimus
ENSOARG00000003117	SRSF6	83	100.000	ENSVPAG00000003016	SRSF6	83	100.000	Vicugna_pacos
ENSOARG00000003117	SRSF6	53	84.066	ENSXMAG00000021849	srsf6a	55	84.153	Xiphophorus_maculatus