EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000004585 (Gene tree)
Gene ID: -
Gene Symbol: PNLDC1
Alias: -
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 21344 bases
Position: chr8:82724028-82745371
Accession: 101111555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000004911	CAF1	PF04857.20	1.3e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000004995	PNLDC1-201	1593	XM_004011438	ENSOARP00000004911	530 (aa)	XP_004011487	W5P3B1

Gene Model

Click here to download ENSOARG00000004585's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000004585's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000004585	PNLDC1	99	85.660	ENSG00000146453	PNLDC1	99	85.660	Homo_sapiens
ENSOARG00000004585	PNLDC1	98	88.825	ENSAMEG00000015371	PNLDC1	99	88.425	Ailuropoda_melanoleuca
ENSOARG00000004585	PNLDC1	95	57.143	ENSAPLG00000007014	PNLDC1	97	57.143	Anas_platyrhynchos
ENSOARG00000004585	PNLDC1	99	59.510	ENSACAG00000013667	PNLDC1	99	59.510	Anolis_carolinensis
ENSOARG00000004585	PNLDC1	100	83.427	ENSANAG00000034713	PNLDC1	100	84.344	Aotus_nancymaae
ENSOARG00000004585	PNLDC1	95	95.455	ENSBTAG00000015166	PNLDC1	96	95.455	Bos_taurus
ENSOARG00000004585	PNLDC1	100	83.427	ENSCJAG00000011865	PNLDC1	100	83.661	Callithrix_jacchus
ENSOARG00000004585	PNLDC1	100	90.207	ENSCAFG00000000740	PNLDC1	100	90.207	Canis_familiaris
ENSOARG00000004585	PNLDC1	100	89.811	ENSCAFG00020017742	PNLDC1	100	89.811	Canis_lupus_dingo
ENSOARG00000004585	PNLDC1	100	97.170	ENSCHIG00000003141	PNLDC1	100	97.170	Capra_hircus
ENSOARG00000004585	PNLDC1	100	83.239	ENSTSYG00000005606	PNLDC1	100	83.239	Carlito_syrichta
ENSOARG00000004585	PNLDC1	100	60.829	ENSCAPG00000011893	PNLDC1	100	60.829	Cavia_aperea
ENSOARG00000004585	PNLDC1	100	77.820	ENSCPOG00000019565	PNLDC1	100	77.820	Cavia_porcellus
ENSOARG00000004585	PNLDC1	100	83.804	ENSCCAG00000026232	PNLDC1	100	83.804	Cebus_capucinus
ENSOARG00000004585	PNLDC1	100	84.746	ENSCATG00000033196	PNLDC1	100	84.746	Cercocebus_atys
ENSOARG00000004585	PNLDC1	99	83.019	ENSCLAG00000003228	PNLDC1	99	83.019	Chinchilla_lanigera
ENSOARG00000004585	PNLDC1	97	84.109	ENSCSAG00000012478	PNLDC1	99	84.109	Chlorocebus_sabaeus
ENSOARG00000004585	PNLDC1	96	64.933	ENSCPBG00000004050	PNLDC1	100	66.016	Chrysemys_picta_bellii
ENSOARG00000004585	PNLDC1	95	84.585	ENSCANG00000043076	PNLDC1	97	84.585	Colobus_angolensis_palliatus
ENSOARG00000004585	PNLDC1	100	62.712	ENSCGRG00001011981	-	99	62.712	Cricetulus_griseus_chok1gshd
ENSOARG00000004585	PNLDC1	100	78.531	ENSCGRG00001007470	-	99	78.531	Cricetulus_griseus_chok1gshd
ENSOARG00000004585	PNLDC1	100	65.160	ENSCGRG00000003103	-	99	65.160	Cricetulus_griseus_crigri
ENSOARG00000004585	PNLDC1	100	78.531	ENSCGRG00000010221	-	99	78.531	Cricetulus_griseus_crigri
ENSOARG00000004585	PNLDC1	100	85.526	ENSDNOG00000013709	PNLDC1	100	85.526	Dasypus_novemcinctus
ENSOARG00000004585	PNLDC1	100	77.154	ENSDORG00000011517	Pnldc1	99	86.901	Dipodomys_ordii
ENSOARG00000004585	PNLDC1	93	74.899	ENSETEG00000007587	PNLDC1	99	74.899	Echinops_telfairi
ENSOARG00000004585	PNLDC1	100	82.075	ENSEASG00005019029	PNLDC1	100	82.075	Equus_asinus_asinus
ENSOARG00000004585	PNLDC1	100	89.077	ENSECAG00000012898	PNLDC1	100	89.077	Equus_caballus
ENSOARG00000004585	PNLDC1	67	78.125	ENSEEUG00000005717	-	86	78.125	Erinaceus_europaeus
ENSOARG00000004585	PNLDC1	100	89.454	ENSFCAG00000002848	PNLDC1	100	89.454	Felis_catus
ENSOARG00000004585	PNLDC1	94	55.842	ENSFALG00000012081	PNLDC1	99	55.842	Ficedula_albicollis
ENSOARG00000004585	PNLDC1	100	83.427	ENSFDAG00000021334	PNLDC1	100	83.427	Fukomys_damarensis
ENSOARG00000004585	PNLDC1	79	58.432	ENSGALG00000011624	PNLDC1	82	58.432	Gallus_gallus
ENSOARG00000004585	PNLDC1	99	64.906	ENSGAGG00000015276	PNLDC1	100	66.322	Gopherus_agassizii
ENSOARG00000004585	PNLDC1	100	85.499	ENSGGOG00000014077	PNLDC1	100	85.499	Gorilla_gorilla
ENSOARG00000004585	PNLDC1	100	84.934	ENSHGLG00000006889	PNLDC1	100	84.934	Heterocephalus_glaber_female
ENSOARG00000004585	PNLDC1	100	84.934	ENSHGLG00100018275	PNLDC1	100	84.934	Heterocephalus_glaber_male
ENSOARG00000004585	PNLDC1	99	87.287	ENSSTOG00000005595	PNLDC1	99	87.287	Ictidomys_tridecemlineatus
ENSOARG00000004585	PNLDC1	99	77.419	ENSJJAG00000009937	Pnldc1	99	77.419	Jaculus_jaculus
ENSOARG00000004585	PNLDC1	59	86.667	ENSLAFG00000030189	PNLDC1	92	86.667	Loxodonta_africana
ENSOARG00000004585	PNLDC1	100	85.311	ENSMFAG00000041296	PNLDC1	100	85.311	Macaca_fascicularis
ENSOARG00000004585	PNLDC1	100	85.311	ENSMMUG00000004181	PNLDC1	100	85.311	Macaca_mulatta
ENSOARG00000004585	PNLDC1	100	85.122	ENSMNEG00000034271	PNLDC1	100	85.122	Macaca_nemestrina
ENSOARG00000004585	PNLDC1	100	82.830	ENSMLEG00000044059	PNLDC1	100	82.830	Mandrillus_leucophaeus
ENSOARG00000004585	PNLDC1	95	57.677	ENSMGAG00000012470	PNLDC1	97	57.677	Meleagris_gallopavo
ENSOARG00000004585	PNLDC1	99	64.595	ENSMAUG00000012298	Pnldc1	99	64.595	Mesocricetus_auratus
ENSOARG00000004585	PNLDC1	100	86.064	ENSMICG00000008021	PNLDC1	100	86.064	Microcebus_murinus
ENSOARG00000004585	PNLDC1	100	83.677	ENSMOCG00000014287	Pnldc1	100	83.677	Microtus_ochrogaster
ENSOARG00000004585	PNLDC1	99	75.803	ENSMODG00000007420	PNLDC1	99	75.803	Monodelphis_domestica
ENSOARG00000004585	PNLDC1	100	84.369	MGP_CAROLIEiJ_G0021045	Pnldc1	100	84.369	Mus_caroli
ENSOARG00000004585	PNLDC1	100	84.181	ENSMUSG00000073460	Pnldc1	100	89.524	Mus_musculus
ENSOARG00000004585	PNLDC1	100	84.746	MGP_PahariEiJ_G0023361	Pnldc1	100	84.746	Mus_pahari
ENSOARG00000004585	PNLDC1	100	83.992	MGP_SPRETEiJ_G0021975	Pnldc1	100	83.992	Mus_spretus
ENSOARG00000004585	PNLDC1	99	89.057	ENSMPUG00000004920	PNLDC1	99	89.057	Mustela_putorius_furo
ENSOARG00000004585	PNLDC1	100	85.122	ENSMLUG00000000747	PNLDC1	100	85.122	Myotis_lucifugus
ENSOARG00000004585	PNLDC1	100	84.746	ENSNGAG00000017714	Pnldc1	99	84.746	Nannospalax_galili
ENSOARG00000004585	PNLDC1	97	84.302	ENSNLEG00000011282	PNLDC1	99	84.302	Nomascus_leucogenys
ENSOARG00000004585	PNLDC1	60	63.950	ENSMEUG00000011926	-	64	63.950	Notamacropus_eugenii
ENSOARG00000004585	PNLDC1	54	69.444	ENSMEUG00000014042	-	100	69.444	Notamacropus_eugenii
ENSOARG00000004585	PNLDC1	78	86.364	ENSOPRG00000003813	PNLDC1	79	86.364	Ochotona_princeps
ENSOARG00000004585	PNLDC1	100	82.486	ENSODEG00000008047	PNLDC1	100	82.486	Octodon_degus
ENSOARG00000004585	PNLDC1	99	55.871	ENSOANG00000012199	PNLDC1	99	57.765	Ornithorhynchus_anatinus
ENSOARG00000004585	PNLDC1	100	83.992	ENSOCUG00000013867	PNLDC1	100	83.992	Oryctolagus_cuniculus
ENSOARG00000004585	PNLDC1	99	86.717	ENSOGAG00000007331	PNLDC1	99	86.717	Otolemur_garnettii
ENSOARG00000004585	PNLDC1	100	85.122	ENSPPAG00000026651	PNLDC1	100	85.122	Pan_paniscus
ENSOARG00000004585	PNLDC1	100	89.077	ENSPPRG00000012854	PNLDC1	100	89.077	Panthera_pardus
ENSOARG00000004585	PNLDC1	98	86.424	ENSPTIG00000011501	PNLDC1	98	86.424	Panthera_tigris_altaica
ENSOARG00000004585	PNLDC1	100	85.122	ENSPTRG00000018762	PNLDC1	100	85.122	Pan_troglodytes
ENSOARG00000004585	PNLDC1	100	85.311	ENSPANG00000022009	PNLDC1	100	85.311	Papio_anubis
ENSOARG00000004585	PNLDC1	100	84.369	ENSPEMG00000016301	Pnldc1	99	84.369	Peromyscus_maniculatus_bairdii
ENSOARG00000004585	PNLDC1	83	76.765	ENSPCIG00000023412	PNLDC1	100	76.765	Phascolarctos_cinereus
ENSOARG00000004585	PNLDC1	100	78.947	ENSPPYG00000017148	PNLDC1	100	78.947	Pongo_abelii
ENSOARG00000004585	PNLDC1	99	76.281	ENSPCAG00000014169	PNLDC1	99	76.281	Procavia_capensis
ENSOARG00000004585	PNLDC1	100	85.687	ENSPCOG00000025722	PNLDC1	100	85.687	Propithecus_coquereli
ENSOARG00000004585	PNLDC1	71	95.213	ENSPVAG00000005325	PNLDC1	71	95.213	Pteropus_vampyrus
ENSOARG00000004585	PNLDC1	100	83.585	ENSRNOG00000023140	Pnldc1	99	85.535	Rattus_norvegicus
ENSOARG00000004585	PNLDC1	100	84.934	ENSRBIG00000033806	PNLDC1	100	84.934	Rhinopithecus_bieti
ENSOARG00000004585	PNLDC1	95	85.178	ENSRROG00000043919	PNLDC1	97	85.178	Rhinopithecus_roxellana
ENSOARG00000004585	PNLDC1	100	84.181	ENSSBOG00000019135	PNLDC1	100	84.181	Saimiri_boliviensis_boliviensis
ENSOARG00000004585	PNLDC1	96	75.686	ENSSHAG00000015192	PNLDC1	98	75.686	Sarcophilus_harrisii
ENSOARG00000004585	PNLDC1	54	67.483	ENSSPUG00000004627	PNLDC1	99	67.857	Sphenodon_punctatus
ENSOARG00000004585	PNLDC1	96	89.194	ENSSSCG00000004046	PNLDC1	99	89.194	Sus_scrofa
ENSOARG00000004585	PNLDC1	91	56.879	ENSTGUG00000011418	PNLDC1	99	56.879	Taeniopygia_guttata
ENSOARG00000004585	PNLDC1	96	75.098	ENSTBEG00000009131	PNLDC1	98	75.098	Tupaia_belangeri
ENSOARG00000004585	PNLDC1	71	85.904	ENSTTRG00000010409	PNLDC1	71	85.904	Tursiops_truncatus
ENSOARG00000004585	PNLDC1	99	77.222	ENSUAMG00000015783	PNLDC1	99	77.222	Ursus_americanus
ENSOARG00000004585	PNLDC1	95	82.353	ENSUMAG00000011903	PNLDC1	99	82.353	Ursus_maritimus
ENSOARG00000004585	PNLDC1	96	91.194	ENSVVUG00000006586	PNLDC1	99	89.938	Vulpes_vulpes