EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSOARG00000005425 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: survival of motor neuron 2%2C centromeric
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Plus strand
Length: 10886 bases
Position: chr16:10106488-10117373
Accession: 101110178
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000005820	TUDOR	PF00567.24	4.1e-05	1	1
ENSOARP00000005820	SMN	PF06003.12	1.1e-104	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000005910	-	822	XM_004017114	ENSOARP00000005820	273 (aa)	-	W5P5W7

Gene Model

Click here to download ENSOARG00000005425's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000005425's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000005425	-	99	82.482	ENSG00000172062	SMN1	93	82.482	Homo_sapiens
ENSOARG00000005425	-	99	82.482	ENSG00000205571	SMN2	87	92.500	Homo_sapiens
ENSOARG00000005425	-	97	50.000	ENSAPOG00000011324	smn1	94	52.000	Acanthochromis_polyacanthus
ENSOARG00000005425	-	100	86.182	ENSAMEG00000003316	-	91	86.182	Ailuropoda_melanoleuca
ENSOARG00000005425	-	94	47.547	ENSACIG00000019772	-	97	48.263	Amphilophus_citrinellus
ENSOARG00000005425	-	97	49.818	ENSAOCG00000024444	smn1	94	51.852	Amphiprion_ocellaris
ENSOARG00000005425	-	97	50.182	ENSAPEG00000016504	smn1	94	53.053	Amphiprion_percula
ENSOARG00000005425	-	95	52.190	ENSATEG00000002182	smn1	80	52.045	Anabas_testudineus
ENSOARG00000005425	-	72	60.406	ENSAPLG00000010912	-	96	58.883	Anas_platyrhynchos
ENSOARG00000005425	-	99	55.036	ENSACAG00000010017	-	95	57.348	Anolis_carolinensis
ENSOARG00000005425	-	99	79.348	ENSANAG00000032133	-	93	79.710	Aotus_nancymaae
ENSOARG00000005425	-	97	50.549	ENSACLG00000007308	smn1	90	51.460	Astatotilapia_calliptera
ENSOARG00000005425	-	53	51.034	ENSAMXG00000013884	smn1	97	47.719	Astyanax_mexicanus
ENSOARG00000005425	-	100	94.139	ENSBTAG00000005743	SMN2	95	94.139	Bos_taurus
ENSOARG00000005425	-	99	81.091	ENSCJAG00000016290	-	93	81.091	Callithrix_jacchus
ENSOARG00000005425	-	100	84.727	ENSCAFG00000007812	SMN	95	84.727	Canis_familiaris
ENSOARG00000005425	-	99	84.672	ENSCAFG00020019229	-	88	84.672	Canis_lupus_dingo
ENSOARG00000005425	-	100	95.636	ENSCHIG00000015559	-	93	95.636	Capra_hircus
ENSOARG00000005425	-	99	83.883	ENSTSYG00000012058	-	94	83.883	Carlito_syrichta
ENSOARG00000005425	-	81	68.282	ENSCAPG00000011021	-	100	70.175	Cavia_aperea
ENSOARG00000005425	-	100	77.174	ENSCPOG00000036973	-	94	78.986	Cavia_porcellus
ENSOARG00000005425	-	100	76.868	ENSCPOG00000012328	-	95	78.648	Cavia_porcellus
ENSOARG00000005425	-	99	80.586	ENSCCAG00000018127	-	93	80.586	Cebus_capucinus
ENSOARG00000005425	-	99	82.482	ENSCATG00000037002	-	93	82.482	Cercocebus_atys
ENSOARG00000005425	-	100	78.214	ENSCLAG00000000284	-	94	78.214	Chinchilla_lanigera
ENSOARG00000005425	-	99	80.292	ENSCSAG00000015688	-	93	82.482	Chlorocebus_sabaeus
ENSOARG00000005425	-	91	74.104	ENSCHOG00000007346	-	100	70.881	Choloepus_hoffmanni
ENSOARG00000005425	-	97	61.111	ENSCPBG00000010968	-	96	62.595	Chrysemys_picta_bellii
ENSOARG00000005425	-	92	80.784	ENSCANG00000033324	-	89	79.848	Colobus_angolensis_palliatus
ENSOARG00000005425	-	99	82.784	ENSCANG00000038242	-	93	83.077	Colobus_angolensis_palliatus
ENSOARG00000005425	-	76	70.048	ENSCGRG00001016998	-	88	69.778	Cricetulus_griseus_chok1gshd
ENSOARG00000005425	-	100	78.182	ENSCGRG00001017959	-	95	78.545	Cricetulus_griseus_chok1gshd
ENSOARG00000005425	-	100	78.182	ENSCGRG00000007698	Smn1	95	78.545	Cricetulus_griseus_crigri
ENSOARG00000005425	-	97	47.703	ENSCSEG00000015227	smn1	96	51.264	Cynoglossus_semilaevis
ENSOARG00000005425	-	97	49.462	ENSCVAG00000007498	smn1	94	51.071	Cyprinodon_variegatus
ENSOARG00000005425	-	97	45.017	ENSDARG00000018494	smn1	95	49.306	Danio_rerio
ENSOARG00000005425	-	78	67.290	ENSDNOG00000045949	-	89	67.290	Dasypus_novemcinctus
ENSOARG00000005425	-	88	83.058	ENSDNOG00000007283	-	100	83.058	Dasypus_novemcinctus
ENSOARG00000005425	-	88	81.070	ENSDORG00000007082	Smn1	90	81.070	Dipodomys_ordii
ENSOARG00000005425	-	69	65.445	ENSETEG00000001406	-	93	68.063	Echinops_telfairi
ENSOARG00000005425	-	96	38.849	ENSEBUG00000011902	smn1	94	40.357	Eptatretus_burgeri
ENSOARG00000005425	-	95	79.087	ENSEASG00005018000	-	93	80.989	Equus_asinus_asinus
ENSOARG00000005425	-	100	82.609	ENSECAG00000015215	-	95	84.420	Equus_caballus
ENSOARG00000005425	-	91	79.681	ENSEEUG00000015777	-	100	79.681	Erinaceus_europaeus
ENSOARG00000005425	-	97	52.727	ENSELUG00000018067	smn1	94	50.896	Esox_lucius
ENSOARG00000005425	-	100	84.364	ENSFCAG00000028292	SMN	95	84.364	Felis_catus
ENSOARG00000005425	-	96	61.111	ENSFALG00000012320	-	96	60.219	Ficedula_albicollis
ENSOARG00000005425	-	100	76.429	ENSFDAG00000017683	-	94	76.429	Fukomys_damarensis
ENSOARG00000005425	-	65	50.562	ENSFHEG00000018508	smn1	96	51.504	Fundulus_heteroclitus
ENSOARG00000005425	-	97	51.311	ENSGMOG00000017279	smn1	92	47.566	Gadus_morhua
ENSOARG00000005425	-	98	58.889	ENSGALG00000002430	SMN	96	58.984	Gallus_gallus
ENSOARG00000005425	-	97	51.087	ENSGAFG00000009501	smn1	94	50.182	Gambusia_affinis
ENSOARG00000005425	-	97	52.045	ENSGACG00000010584	smn1	91	50.373	Gasterosteus_aculeatus
ENSOARG00000005425	-	97	38.760	ENSGAGG00000013639	-	90	38.760	Gopherus_agassizii
ENSOARG00000005425	-	97	60.000	ENSGAGG00000011374	-	93	60.370	Gopherus_agassizii
ENSOARG00000005425	-	98	71.111	ENSGGOG00000003872	-	93	72.692	Gorilla_gorilla
ENSOARG00000005425	-	64	80.226	ENSGGOG00000026704	-	91	79.487	Gorilla_gorilla
ENSOARG00000005425	-	97	47.547	ENSHBUG00000013987	smn1	94	52.174	Haplochromis_burtoni
ENSOARG00000005425	-	100	76.000	ENSHGLG00000001905	-	96	76.000	Heterocephalus_glaber_female
ENSOARG00000005425	-	100	76.071	ENSHGLG00000001018	-	94	76.071	Heterocephalus_glaber_female
ENSOARG00000005425	-	96	75.665	ENSHGLG00100018676	-	96	75.665	Heterocephalus_glaber_male
ENSOARG00000005425	-	100	76.071	ENSHGLG00100011252	-	94	76.071	Heterocephalus_glaber_male
ENSOARG00000005425	-	94	47.940	ENSHCOG00000017136	smn1	86	45.693	Hippocampus_comes
ENSOARG00000005425	-	99	48.000	ENSIPUG00000012580	smn1	86	47.079	Ictalurus_punctatus
ENSOARG00000005425	-	95	83.846	ENSSTOG00000012288	-	93	83.846	Ictidomys_tridecemlineatus
ENSOARG00000005425	-	61	63.473	ENSJJAG00000014853	-	100	62.632	Jaculus_jaculus
ENSOARG00000005425	-	97	52.158	ENSKMAG00000007239	smn1	96	52.510	Kryptolebias_marmoratus
ENSOARG00000005425	-	97	52.000	ENSLBEG00000022550	smn1	96	52.963	Labrus_bergylta
ENSOARG00000005425	-	97	36.170	ENSLACG00000009808	-	89	37.847	Latimeria_chalumnae
ENSOARG00000005425	-	97	30.996	ENSLOCG00000000801	-	85	30.851	Lepisosteus_oculatus
ENSOARG00000005425	-	97	49.442	ENSLOCG00000011339	smn1	94	50.000	Lepisosteus_oculatus
ENSOARG00000005425	-	100	80.645	ENSLAFG00000003425	-	91	80.645	Loxodonta_africana
ENSOARG00000005425	-	99	82.847	ENSMFAG00000031523	SMN1	96	84.270	Macaca_fascicularis
ENSOARG00000005425	-	99	79.197	ENSMFAG00000008812	-	93	79.197	Macaca_fascicularis
ENSOARG00000005425	-	99	82.847	ENSMMUG00000020214	SMN1	93	82.847	Macaca_mulatta
ENSOARG00000005425	-	99	78.467	ENSMMUG00000030594	-	93	78.467	Macaca_mulatta
ENSOARG00000005425	-	99	82.482	ENSMNEG00000035094	-	93	82.482	Macaca_nemestrina
ENSOARG00000005425	-	82	70.485	ENSMNEG00000036423	-	86	71.493	Macaca_nemestrina
ENSOARG00000005425	-	99	83.212	ENSMLEG00000041902	-	93	83.525	Mandrillus_leucophaeus
ENSOARG00000005425	-	97	48.897	ENSMAMG00000011034	smn1	94	50.735	Mastacembelus_armatus
ENSOARG00000005425	-	97	47.191	ENSMZEG00005013634	smn1	94	51.812	Maylandia_zebra
ENSOARG00000005425	-	71	57.949	ENSMGAG00000008889	-	94	57.436	Meleagris_gallopavo
ENSOARG00000005425	-	100	77.818	ENSMAUG00000010262	Smn1	95	78.182	Mesocricetus_auratus
ENSOARG00000005425	-	81	79.646	ENSMICG00000034708	-	86	80.311	Microcebus_murinus
ENSOARG00000005425	-	100	74.818	ENSMOCG00000017833	Smn1	95	76.277	Microtus_ochrogaster
ENSOARG00000005425	-	97	44.565	ENSMMOG00000005504	smn1	96	48.551	Mola_mola
ENSOARG00000005425	-	100	67.391	ENSMODG00000001436	-	94	67.391	Monodelphis_domestica
ENSOARG00000005425	-	97	50.725	ENSMALG00000008025	smn1	94	51.986	Monopterus_albus
ENSOARG00000005425	-	100	76.812	MGP_CAROLIEiJ_G0018836	Smn1	95	78.261	Mus_caroli
ENSOARG00000005425	-	100	76.812	ENSMUSG00000021645	Smn1	95	77.899	Mus_musculus
ENSOARG00000005425	-	100	75.273	MGP_PahariEiJ_G0015911	Smn1	95	76.364	Mus_pahari
ENSOARG00000005425	-	100	76.449	MGP_SPRETEiJ_G0019718	Smn1	95	77.899	Mus_spretus
ENSOARG00000005425	-	95	86.590	ENSMPUG00000014470	-	92	86.590	Mustela_putorius_furo
ENSOARG00000005425	-	100	84.752	ENSMLUG00000010603	-	91	84.752	Myotis_lucifugus
ENSOARG00000005425	-	100	77.455	ENSNGAG00000019833	Smn1	95	79.273	Nannospalax_galili
ENSOARG00000005425	-	56	58.065	ENSNBRG00000023000	smn1	94	52.045	Neolamprologus_brichardi
ENSOARG00000005425	-	99	82.482	ENSNLEG00000004454	-	93	82.482	Nomascus_leucogenys
ENSOARG00000005425	-	82	63.877	ENSMEUG00000011393	-	99	64.912	Notamacropus_eugenii
ENSOARG00000005425	-	91	77.866	ENSOPRG00000002015	-	100	79.447	Ochotona_princeps
ENSOARG00000005425	-	95	80.000	ENSODEG00000015976	-	91	80.000	Octodon_degus
ENSOARG00000005425	-	56	58.065	ENSONIG00000011799	smn1	94	52.045	Oreochromis_niloticus
ENSOARG00000005425	-	99	61.232	ENSOANG00000001626	-	96	62.366	Ornithorhynchus_anatinus
ENSOARG00000005425	-	100	79.636	ENSOCUG00000017097	-	94	81.091	Oryctolagus_cuniculus
ENSOARG00000005425	-	88	82.114	ENSOCUG00000025183	-	91	83.806	Oryctolagus_cuniculus
ENSOARG00000005425	-	99	78.495	ENSOCUG00000026649	-	94	79.211	Oryctolagus_cuniculus
ENSOARG00000005425	-	97	46.468	ENSORLG00000010552	smn1	94	51.111	Oryzias_latipes
ENSOARG00000005425	-	97	51.311	ENSORLG00020007936	smn1	93	51.292	Oryzias_latipes_hni
ENSOARG00000005425	-	97	46.097	ENSORLG00015022425	smn1	94	50.741	Oryzias_latipes_hsok
ENSOARG00000005425	-	97	47.212	ENSOMEG00000007824	smn1	94	49.265	Oryzias_melastigma
ENSOARG00000005425	-	95	73.308	ENSOGAG00000031414	-	92	72.453	Otolemur_garnettii
ENSOARG00000005425	-	99	82.482	ENSPPAG00000036640	-	93	82.482	Pan_paniscus
ENSOARG00000005425	-	100	84.727	ENSPPRG00000005575	-	95	84.727	Panthera_pardus
ENSOARG00000005425	-	100	84.420	ENSPTIG00000007745	-	95	84.420	Panthera_tigris_altaica
ENSOARG00000005425	-	99	81.227	ENSPTRG00000016955	-	93	81.588	Pan_troglodytes
ENSOARG00000005425	-	99	82.847	ENSPANG00000013601	-	93	82.847	Papio_anubis
ENSOARG00000005425	-	98	78.967	ENSPANG00000000253	-	92	79.336	Papio_anubis
ENSOARG00000005425	-	97	49.458	ENSPKIG00000011096	smn1	94	50.000	Paramormyrops_kingsleyae
ENSOARG00000005425	-	95	61.217	ENSPSIG00000014787	-	83	62.738	Pelodiscus_sinensis
ENSOARG00000005425	-	99	45.775	ENSPMGG00000012285	smn1	94	50.000	Periophthalmus_magnuspinnatus
ENSOARG00000005425	-	96	41.791	ENSPMAG00000005004	smn1	91	40.149	Petromyzon_marinus
ENSOARG00000005425	-	100	67.754	ENSPCIG00000025764	-	95	67.754	Phascolarctos_cinereus
ENSOARG00000005425	-	97	50.725	ENSPFOG00000007786	smn1	94	50.735	Poecilia_formosa
ENSOARG00000005425	-	97	51.087	ENSPLAG00000012071	smn1	94	51.103	Poecilia_latipinna
ENSOARG00000005425	-	97	50.725	ENSPMEG00000017085	smn1	94	50.735	Poecilia_mexicana
ENSOARG00000005425	-	97	50.362	ENSPREG00000005824	smn1	94	50.909	Poecilia_reticulata
ENSOARG00000005425	-	91	54.217	ENSPPYG00000019189	-	99	53.414	Pongo_abelii
ENSOARG00000005425	-	97	83.521	ENSPPYG00000015533	-	96	83.521	Pongo_abelii
ENSOARG00000005425	-	97	76.384	ENSPCAG00000004187	-	100	77.122	Procavia_capensis
ENSOARG00000005425	-	73	81.000	ENSPCOG00000022307	-	100	68.302	Propithecus_coquereli
ENSOARG00000005425	-	100	86.182	ENSPVAG00000005977	-	94	86.182	Pteropus_vampyrus
ENSOARG00000005425	-	56	58.065	ENSPNYG00000014148	smn1	94	52.045	Pundamilia_nyererei
ENSOARG00000005425	-	98	47.955	ENSPNAG00000014007	smn1	82	48.746	Pygocentrus_nattereri
ENSOARG00000005425	-	100	74.638	ENSRNOG00000018067	Smn1	95	75.000	Rattus_norvegicus
ENSOARG00000005425	-	96	69.776	ENSRBIG00000036775	-	90	71.269	Rhinopithecus_bieti
ENSOARG00000005425	-	99	82.847	ENSRBIG00000037052	-	93	82.847	Rhinopithecus_bieti
ENSOARG00000005425	-	99	68.727	ENSRROG00000031088	-	92	69.818	Rhinopithecus_roxellana
ENSOARG00000005425	-	99	82.847	ENSRROG00000039399	-	93	82.847	Rhinopithecus_roxellana
ENSOARG00000005425	-	88	76.494	ENSSBOG00000020112	-	94	72.426	Saimiri_boliviensis_boliviensis
ENSOARG00000005425	-	99	79.487	ENSSBOG00000011665	-	93	80.220	Saimiri_boliviensis_boliviensis
ENSOARG00000005425	-	100	67.754	ENSSHAG00000001499	-	97	69.145	Sarcophilus_harrisii
ENSOARG00000005425	-	97	49.270	ENSSFOG00015015507	smn1	94	49.466	Scleropages_formosus
ENSOARG00000005425	-	97	47.842	ENSSMAG00000007922	smn1	94	50.000	Scophthalmus_maximus
ENSOARG00000005425	-	98	49.097	ENSSDUG00000018533	smn1	94	51.838	Seriola_dumerili
ENSOARG00000005425	-	98	49.458	ENSSLDG00000021135	smn1	94	52.206	Seriola_lalandi_dorsalis
ENSOARG00000005425	-	97	61.567	ENSSPUG00000000373	-	93	62.454	Sphenodon_punctatus
ENSOARG00000005425	-	98	51.449	ENSSPAG00000004345	smn1	94	51.087	Stegastes_partitus
ENSOARG00000005425	-	97	61.423	ENSSSCG00000029127	-	92	61.455	Sus_scrofa
ENSOARG00000005425	-	100	81.455	ENSSSCG00000016970	-	94	85.818	Sus_scrofa
ENSOARG00000005425	-	78	56.808	ENSSSCG00000033865	-	95	57.209	Sus_scrofa
ENSOARG00000005425	-	95	59.023	ENSTGUG00000001548	-	95	59.023	Taeniopygia_guttata
ENSOARG00000005425	-	59	53.416	ENSTRUG00000000736	smn	94	46.691	Takifugu_rubripes
ENSOARG00000005425	-	98	48.921	ENSTNIG00000009892	smn1	94	50.177	Tetraodon_nigroviridis
ENSOARG00000005425	-	64	80.226	ENSTBEG00000002399	-	93	81.250	Tupaia_belangeri
ENSOARG00000005425	-	100	84.000	ENSTTRG00000005080	-	93	85.091	Tursiops_truncatus
ENSOARG00000005425	-	64	83.616	ENSUAMG00000024947	-	72	83.333	Ursus_americanus
ENSOARG00000005425	-	100	86.909	ENSUMAG00000007842	-	71	86.909	Ursus_maritimus
ENSOARG00000005425	-	95	70.385	ENSVPAG00000009887	-	93	65.000	Vicugna_pacos
ENSOARG00000005425	-	100	84.727	ENSVVUG00000006934	-	95	84.727	Vulpes_vulpes
ENSOARG00000005425	-	95	53.612	ENSXETG00000018189	smn2	88	54.887	Xenopus_tropicalis
ENSOARG00000005425	-	53	43.448	ENSXETG00000004912	-	76	58.730	Xenopus_tropicalis
ENSOARG00000005425	-	97	51.449	ENSXMAG00000001521	smn1	94	50.182	Xiphophorus_maculatus