EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000005778 (Gene tree)
Gene ID: 101102770
Gene Symbol: SMG5
Alias: -
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 29483 bases
Position: chr1:104831170-104860652
Accession: 101102770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000006202	EST1	PF10374.9	4.2e-24	1	1
ENSOARP00000006202	EST1_DNA_bind	PF10373.9	3.4e-40	1	2
ENSOARP00000006202	EST1_DNA_bind	PF10373.9	3.4e-40	2	2
ENSOARP00000006202	PIN_4	PF13638.6	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000006296	SMG5-201	7189	XM_004002609	ENSOARP00000006202	1016 (aa)	XP_004002658	W5P6Z8

Gene Model

Click here to download ENSOARG00000005778's gene model file

Pathways

Pathway ID	Pathway Name	Source
oas03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000005778's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000005778	SMG5	99	44.109	ENSOARG00000011963	-	99	43.149

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000005778	SMG5	100	96.161	ENSG00000198952	SMG5	100	96.161	Homo_sapiens
ENSOARG00000005778	SMG5	99	67.815	ENSAPOG00000019690	smg5	93	77.494	Acanthochromis_polyacanthus
ENSOARG00000005778	SMG5	98	92.951	ENSAMEG00000014458	SMG5	100	92.951	Ailuropoda_melanoleuca
ENSOARG00000005778	SMG5	99	65.038	ENSACIG00000001353	smg5	99	66.955	Amphilophus_citrinellus
ENSOARG00000005778	SMG5	98	64.828	ENSAOCG00000019483	smg5	93	78.638	Amphiprion_ocellaris
ENSOARG00000005778	SMG5	98	66.171	ENSAPEG00000022949	smg5	93	78.404	Amphiprion_percula
ENSOARG00000005778	SMG5	99	66.184	ENSATEG00000005348	smg5	99	66.635	Anabas_testudineus
ENSOARG00000005778	SMG5	98	78.439	ENSAPLG00000010263	SMG5	100	78.146	Anas_platyrhynchos
ENSOARG00000005778	SMG5	100	95.571	ENSANAG00000032899	SMG5	100	95.571	Aotus_nancymaae
ENSOARG00000005778	SMG5	93	75.621	ENSACLG00000009311	smg5	99	65.992	Astatotilapia_calliptera
ENSOARG00000005778	SMG5	99	43.780	ENSBTAG00000021747	-	99	43.037	Bos_taurus
ENSOARG00000005778	SMG5	100	99.213	ENSBTAG00000009435	SMG5	100	99.213	Bos_taurus
ENSOARG00000005778	SMG5	100	95.768	ENSCJAG00000005684	SMG5	100	95.768	Callithrix_jacchus
ENSOARG00000005778	SMG5	100	94.094	ENSCAFG00000016839	SMG5	100	94.094	Canis_familiaris
ENSOARG00000005778	SMG5	100	94.094	ENSCAFG00020006061	SMG5	100	94.094	Canis_lupus_dingo
ENSOARG00000005778	SMG5	100	99.902	ENSCHIG00000007709	SMG5	100	99.902	Capra_hircus
ENSOARG00000005778	SMG5	99	44.444	ENSCHIG00000006323	-	99	44.488	Capra_hircus
ENSOARG00000005778	SMG5	100	94.887	ENSTSYG00000004099	SMG5	100	93.904	Carlito_syrichta
ENSOARG00000005778	SMG5	97	73.327	ENSCAPG00000003631	SMG5	100	73.832	Cavia_aperea
ENSOARG00000005778	SMG5	100	94.499	ENSCPOG00000015696	SMG5	100	94.204	Cavia_porcellus
ENSOARG00000005778	SMG5	100	95.669	ENSCCAG00000027409	SMG5	100	95.669	Cebus_capucinus
ENSOARG00000005778	SMG5	100	96.161	ENSCATG00000030539	SMG5	100	96.161	Cercocebus_atys
ENSOARG00000005778	SMG5	100	95.088	ENSCLAG00000003983	SMG5	100	94.990	Chinchilla_lanigera
ENSOARG00000005778	SMG5	100	96.063	ENSCSAG00000002120	SMG5	100	96.063	Chlorocebus_sabaeus
ENSOARG00000005778	SMG5	54	89.051	ENSCHOG00000008741	-	57	89.051	Choloepus_hoffmanni
ENSOARG00000005778	SMG5	94	77.001	ENSCPBG00000025848	SMG5	100	78.217	Chrysemys_picta_bellii
ENSOARG00000005778	SMG5	93	34.778	ENSCING00000008706	-	99	34.394	Ciona_intestinalis
ENSOARG00000005778	SMG5	100	92.224	ENSCANG00000029208	SMG5	100	92.224	Colobus_angolensis_palliatus
ENSOARG00000005778	SMG5	100	91.847	ENSCGRG00001006336	Smg5	100	91.356	Cricetulus_griseus_chok1gshd
ENSOARG00000005778	SMG5	98	91.851	ENSCGRG00000005111	Smg5	100	91.339	Cricetulus_griseus_crigri
ENSOARG00000005778	SMG5	99	64.860	ENSCSEG00000014220	smg5	99	64.844	Cynoglossus_semilaevis
ENSOARG00000005778	SMG5	99	60.916	ENSCVAG00000000529	smg5	99	61.419	Cyprinodon_variegatus
ENSOARG00000005778	SMG5	100	90.748	ENSDNOG00000000051	SMG5	100	90.748	Dasypus_novemcinctus
ENSOARG00000005778	SMG5	92	36.825	ENSDNOG00000039862	-	100	35.090	Dasypus_novemcinctus
ENSOARG00000005778	SMG5	100	93.026	ENSDORG00000010382	Smg5	100	93.222	Dipodomys_ordii
ENSOARG00000005778	SMG5	66	36.129	FBgn0019890	Smg5	62	36.129	Drosophila_melanogaster
ENSOARG00000005778	SMG5	82	97.087	ENSETEG00000010336	SMG5	89	97.087	Echinops_telfairi
ENSOARG00000005778	SMG5	90	46.971	ENSEBUG00000003739	smg5	98	47.513	Eptatretus_burgeri
ENSOARG00000005778	SMG5	100	96.063	ENSEASG00005019122	SMG5	100	96.063	Equus_asinus_asinus
ENSOARG00000005778	SMG5	100	96.063	ENSECAG00000001389	SMG5	100	96.063	Equus_caballus
ENSOARG00000005778	SMG5	72	99.135	ENSEEUG00000012690	SMG5	73	99.135	Erinaceus_europaeus
ENSOARG00000005778	SMG5	99	65.217	ENSELUG00000012585	smg5	99	65.507	Esox_lucius
ENSOARG00000005778	SMG5	100	93.799	ENSFCAG00000011783	SMG5	100	93.904	Felis_catus
ENSOARG00000005778	SMG5	58	82.304	ENSFALG00000001166	-	99	82.412	Ficedula_albicollis
ENSOARG00000005778	SMG5	98	92.145	ENSFDAG00000017388	SMG5	100	92.044	Fukomys_damarensis
ENSOARG00000005778	SMG5	97	61.538	ENSFHEG00000013939	smg5	95	68.051	Fundulus_heteroclitus
ENSOARG00000005778	SMG5	99	60.774	ENSGMOG00000007310	smg5	93	76.765	Gadus_morhua
ENSOARG00000005778	SMG5	99	77.821	ENSGALG00000029918	-	100	77.333	Gallus_gallus
ENSOARG00000005778	SMG5	50	51.515	ENSGAFG00000021691	smg5	96	67.093	Gambusia_affinis
ENSOARG00000005778	SMG5	100	78.748	ENSGAGG00000016131	SMG5	100	78.843	Gopherus_agassizii
ENSOARG00000005778	SMG5	100	95.866	ENSGGOG00000010932	SMG5	100	95.866	Gorilla_gorilla
ENSOARG00000005778	SMG5	93	75.621	ENSHBUG00000008654	smg5	99	66.000	Haplochromis_burtoni
ENSOARG00000005778	SMG5	100	92.240	ENSHGLG00000019152	SMG5	100	92.436	Heterocephalus_glaber_female
ENSOARG00000005778	SMG5	90	92.442	ENSHGLG00100015948	SMG5	99	92.662	Heterocephalus_glaber_male
ENSOARG00000005778	SMG5	86	72.947	ENSHCOG00000010229	smg5	84	73.350	Hippocampus_comes
ENSOARG00000005778	SMG5	99	61.935	ENSIPUG00000006624	Smg5	99	61.871	Ictalurus_punctatus
ENSOARG00000005778	SMG5	100	95.177	ENSSTOG00000001780	SMG5	100	95.177	Ictidomys_tridecemlineatus
ENSOARG00000005778	SMG5	100	91.658	ENSJJAG00000022763	Smg5	100	91.266	Jaculus_jaculus
ENSOARG00000005778	SMG5	50	58.974	ENSKMAG00000014586	smg5	99	61.600	Kryptolebias_marmoratus
ENSOARG00000005778	SMG5	99	65.830	ENSLBEG00000002145	smg5	93	78.923	Labrus_bergylta
ENSOARG00000005778	SMG5	100	64.538	ENSLACG00000010521	SMG5	100	64.538	Latimeria_chalumnae
ENSOARG00000005778	SMG5	96	78.404	ENSLOCG00000008380	smg5	92	78.487	Lepisosteus_oculatus
ENSOARG00000005778	SMG5	100	93.799	ENSLAFG00000006241	SMG5	100	93.799	Loxodonta_africana
ENSOARG00000005778	SMG5	100	96.063	ENSMFAG00000045357	SMG5	100	96.063	Macaca_fascicularis
ENSOARG00000005778	SMG5	100	96.063	ENSMMUG00000000090	SMG5	100	96.063	Macaca_mulatta
ENSOARG00000005778	SMG5	100	95.965	ENSMNEG00000044425	SMG5	100	95.965	Macaca_nemestrina
ENSOARG00000005778	SMG5	100	89.804	ENSMLEG00000041192	SMG5	100	89.804	Mandrillus_leucophaeus
ENSOARG00000005778	SMG5	99	61.909	ENSMAMG00000010683	smg5	100	60.491	Mastacembelus_armatus
ENSOARG00000005778	SMG5	63	58.045	ENSMZEG00005016543	smg5	100	59.242	Maylandia_zebra
ENSOARG00000005778	SMG5	99	63.238	ENSMZEG00005015815	smg5	99	64.593	Maylandia_zebra
ENSOARG00000005778	SMG5	100	90.766	ENSMAUG00000010381	Smg5	100	90.472	Mesocricetus_auratus
ENSOARG00000005778	SMG5	100	95.669	ENSMICG00000002257	SMG5	100	95.669	Microcebus_murinus
ENSOARG00000005778	SMG5	100	90.490	ENSMOCG00000016590	Smg5	100	90.196	Microtus_ochrogaster
ENSOARG00000005778	SMG5	99	59.107	ENSMMOG00000017199	smg5	99	58.940	Mola_mola
ENSOARG00000005778	SMG5	78	37.280	ENSMODG00000010675	-	84	37.401	Monodelphis_domestica
ENSOARG00000005778	SMG5	87	89.189	ENSMODG00000016901	SMG5	98	88.176	Monodelphis_domestica
ENSOARG00000005778	SMG5	93	36.585	ENSMODG00000004532	-	87	37.867	Monodelphis_domestica
ENSOARG00000005778	SMG5	97	35.044	ENSMODG00000004511	-	99	34.082	Monodelphis_domestica
ENSOARG00000005778	SMG5	76	39.108	ENSMODG00000004735	-	87	39.200	Monodelphis_domestica
ENSOARG00000005778	SMG5	99	60.641	ENSMALG00000010375	smg5	55	54.870	Monopterus_albus
ENSOARG00000005778	SMG5	100	91.650	MGP_CAROLIEiJ_G0025163	Smg5	100	98.883	Mus_caroli
ENSOARG00000005778	SMG5	100	91.749	ENSMUSG00000001415	Smg5	99	98.883	Mus_musculus
ENSOARG00000005778	SMG5	100	91.364	MGP_PahariEiJ_G0026606	Smg5	100	98.883	Mus_pahari
ENSOARG00000005778	SMG5	100	91.552	MGP_SPRETEiJ_G0026104	Smg5	100	98.883	Mus_spretus
ENSOARG00000005778	SMG5	94	92.947	ENSMPUG00000004546	SMG5	100	92.947	Mustela_putorius_furo
ENSOARG00000005778	SMG5	100	92.962	ENSMLUG00000008518	SMG5	100	93.053	Myotis_lucifugus
ENSOARG00000005778	SMG5	100	92.822	ENSNGAG00000020706	Smg5	100	92.822	Nannospalax_galili
ENSOARG00000005778	SMG5	97	63.564	ENSNBRG00000004332	smg5	98	64.386	Neolamprologus_brichardi
ENSOARG00000005778	SMG5	100	95.669	ENSNLEG00000012439	SMG5	100	95.669	Nomascus_leucogenys
ENSOARG00000005778	SMG5	100	87.512	ENSMEUG00000012834	SMG5	100	87.906	Notamacropus_eugenii
ENSOARG00000005778	SMG5	100	93.799	ENSOPRG00000009152	SMG5	100	93.799	Ochotona_princeps
ENSOARG00000005778	SMG5	100	94.488	ENSODEG00000012237	SMG5	100	94.488	Octodon_degus
ENSOARG00000005778	SMG5	89	41.093	ENSOCUG00000023338	-	99	40.481	Oryctolagus_cuniculus
ENSOARG00000005778	SMG5	98	94.960	ENSOCUG00000012886	SMG5	100	94.960	Oryctolagus_cuniculus
ENSOARG00000005778	SMG5	99	64.327	ENSORLG00020013127	smg5	99	66.276	Oryzias_latipes_hni
ENSOARG00000005778	SMG5	99	64.043	ENSORLG00015019014	smg5	99	66.179	Oryzias_latipes_hsok
ENSOARG00000005778	SMG5	82	59.570	ENSOMEG00000021330	smg5	92	60.323	Oryzias_melastigma
ENSOARG00000005778	SMG5	100	94.193	ENSOGAG00000004966	SMG5	100	94.193	Otolemur_garnettii
ENSOARG00000005778	SMG5	100	95.866	ENSPPAG00000011996	SMG5	100	95.866	Pan_paniscus
ENSOARG00000005778	SMG5	98	93.649	ENSPPRG00000011901	SMG5	100	93.649	Panthera_pardus
ENSOARG00000005778	SMG5	99	85.572	ENSPTIG00000007892	SMG5	98	86.235	Panthera_tigris_altaica
ENSOARG00000005778	SMG5	100	96.063	ENSPTRG00000023925	SMG5	100	96.063	Pan_troglodytes
ENSOARG00000005778	SMG5	100	96.063	ENSPTRG00000049282	-	100	96.063	Pan_troglodytes
ENSOARG00000005778	SMG5	100	96.161	ENSPANG00000011201	SMG5	100	96.161	Papio_anubis
ENSOARG00000005778	SMG5	99	65.460	ENSPKIG00000009402	smg5	99	65.591	Paramormyrops_kingsleyae
ENSOARG00000005778	SMG5	98	79.940	ENSPSIG00000015198	SMG5	100	80.040	Pelodiscus_sinensis
ENSOARG00000005778	SMG5	99	61.014	ENSPMGG00000010465	smg5	99	60.351	Periophthalmus_magnuspinnatus
ENSOARG00000005778	SMG5	100	91.945	ENSPEMG00000001819	Smg5	100	91.552	Peromyscus_maniculatus_bairdii
ENSOARG00000005778	SMG5	56	46.410	ENSPEMG00000010022	-	95	45.189	Peromyscus_maniculatus_bairdii
ENSOARG00000005778	SMG5	99	50.048	ENSPMAG00000000410	smg5	100	50.141	Petromyzon_marinus
ENSOARG00000005778	SMG5	100	88.998	ENSPCIG00000018938	SMG5	100	88.114	Phascolarctos_cinereus
ENSOARG00000005778	SMG5	50	60.223	ENSPFOG00000010191	smg5	99	62.186	Poecilia_formosa
ENSOARG00000005778	SMG5	50	60.409	ENSPLAG00000009332	smg5	99	62.007	Poecilia_latipinna
ENSOARG00000005778	SMG5	99	65.865	ENSPMEG00000014105	smg5	99	65.583	Poecilia_mexicana
ENSOARG00000005778	SMG5	93	76.697	ENSPREG00000017713	smg5	99	61.918	Poecilia_reticulata
ENSOARG00000005778	SMG5	100	96.063	ENSPPYG00000000723	SMG5	100	96.063	Pongo_abelii
ENSOARG00000005778	SMG5	81	85.654	ENSPCAG00000008412	SMG5	88	85.654	Procavia_capensis
ENSOARG00000005778	SMG5	100	95.669	ENSPCOG00000004741	SMG5	100	95.669	Propithecus_coquereli
ENSOARG00000005778	SMG5	100	85.630	ENSPVAG00000016748	SMG5	100	85.630	Pteropus_vampyrus
ENSOARG00000005778	SMG5	93	75.395	ENSPNYG00000013397	smg5	99	61.096	Pundamilia_nyererei
ENSOARG00000005778	SMG5	100	91.650	ENSRNOG00000019590	Smg5	100	91.159	Rattus_norvegicus
ENSOARG00000005778	SMG5	100	95.866	ENSRBIG00000027428	SMG5	100	95.866	Rhinopithecus_bieti
ENSOARG00000005778	SMG5	100	95.768	ENSRROG00000030035	SMG5	100	95.768	Rhinopithecus_roxellana
ENSOARG00000005778	SMG5	100	95.866	ENSSBOG00000033339	SMG5	100	95.866	Saimiri_boliviensis_boliviensis
ENSOARG00000005778	SMG5	99	34.106	ENSSHAG00000009572	-	99	32.540	Sarcophilus_harrisii
ENSOARG00000005778	SMG5	88	39.633	ENSSHAG00000000561	-	86	39.633	Sarcophilus_harrisii
ENSOARG00000005778	SMG5	64	39.181	ENSSHAG00000000935	-	80	40.244	Sarcophilus_harrisii
ENSOARG00000005778	SMG5	98	88.488	ENSSHAG00000014163	SMG5	100	87.588	Sarcophilus_harrisii
ENSOARG00000005778	SMG5	99	66.245	ENSSFOG00015024175	smg5	99	66.049	Scleropages_formosus
ENSOARG00000005778	SMG5	92	76.977	ENSSMAG00000013059	smg5	93	78.454	Scophthalmus_maximus
ENSOARG00000005778	SMG5	99	61.165	ENSSDUG00000007122	smg5	93	77.209	Seriola_dumerili
ENSOARG00000005778	SMG5	99	61.470	ENSSLDG00000011418	smg5	93	77.934	Seriola_lalandi_dorsalis
ENSOARG00000005778	SMG5	90	81.134	ENSSARG00000012484	SMG5	100	81.134	Sorex_araneus
ENSOARG00000005778	SMG5	94	77.508	ENSSPUG00000002260	SMG5	100	76.494	Sphenodon_punctatus
ENSOARG00000005778	SMG5	92	76.620	ENSSPAG00000014266	smg5	99	65.087	Stegastes_partitus
ENSOARG00000005778	SMG5	100	97.047	ENSSSCG00000006490	-	100	97.047	Sus_scrofa
ENSOARG00000005778	SMG5	99	74.089	ENSSSCG00000039308	-	100	75.172	Sus_scrofa
ENSOARG00000005778	SMG5	53	35.921	ENSSSCG00000037182	-	65	42.025	Sus_scrofa
ENSOARG00000005778	SMG5	99	79.822	ENSTGUG00000003748	-	100	79.590	Taeniopygia_guttata
ENSOARG00000005778	SMG5	99	64.417	ENSTRUG00000012580	smg5	99	63.900	Takifugu_rubripes
ENSOARG00000005778	SMG5	99	65.373	ENSTNIG00000010303	smg5	99	65.243	Tetraodon_nigroviridis
ENSOARG00000005778	SMG5	60	100.000	ENSTBEG00000002777	SMG5	60	100.000	Tupaia_belangeri
ENSOARG00000005778	SMG5	100	92.028	ENSTTRG00000001401	SMG5	100	92.028	Tursiops_truncatus
ENSOARG00000005778	SMG5	100	93.602	ENSUAMG00000013721	SMG5	100	93.602	Ursus_americanus
ENSOARG00000005778	SMG5	98	89.146	ENSUMAG00000018041	SMG5	97	89.246	Ursus_maritimus
ENSOARG00000005778	SMG5	98	86.680	ENSVPAG00000009446	SMG5	99	86.680	Vicugna_pacos
ENSOARG00000005778	SMG5	100	93.799	ENSVVUG00000005887	SMG5	100	93.799	Vulpes_vulpes
ENSOARG00000005778	SMG5	77	65.700	ENSXETG00000033791	SMG5	99	65.195	Xenopus_tropicalis
ENSOARG00000005778	SMG5	59	78.199	ENSXCOG00000004379	smg5	96	68.132	Xiphophorus_couchianus
ENSOARG00000005778	SMG5	99	65.988	ENSXMAG00000013499	smg5	99	65.574	Xiphophorus_maculatus