EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOARG00000006041 (Gene tree)
Gene ID: 101115294
Gene Symbol: TNRC6C
Alias: -
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Ovis_aries
Status: putative
Strand: Minus strand
Length: 73623 bases
Position: chr11:53044519-53118141
Accession: 101115294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOARP00000006471	Ago_hook	PF10427.9	2.3e-21	1	1
ENSOARP00000006471	RRM_1	PF00076.22	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOART00000006569	TNRC6C-201	5808	XM_004013479	ENSOARP00000006471	1825 (aa)	-	W5P7R7

Gene Model

Click here to download ENSOARG00000006041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOARG00000006041's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOARG00000006041	TNRC6C	98	35.850	ENSOARG00000017238	TNRC6B	92	35.812
ENSOARG00000006041	TNRC6C	98	40.174	ENSOARG00000017950	TNRC6A	94	40.442

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOARG00000006041	TNRC6C	97	85.060	ENSG00000078687	TNRC6C	100	83.621	Homo_sapiens
ENSOARG00000006041	TNRC6C	93	51.553	ENSAPOG00000019749	tnrc6c1	95	46.285	Acanthochromis_polyacanthus
ENSOARG00000006041	TNRC6C	91	83.908	ENSAMEG00000013756	TNRC6C	96	83.821	Ailuropoda_melanoleuca
ENSOARG00000006041	TNRC6C	88	51.256	ENSACIG00000008075	tnrc6c1	93	51.570	Amphilophus_citrinellus
ENSOARG00000006041	TNRC6C	87	53.250	ENSAOCG00000023968	tnrc6c1	95	47.643	Amphiprion_ocellaris
ENSOARG00000006041	TNRC6C	87	53.250	ENSAPEG00000009020	tnrc6c1	96	46.932	Amphiprion_percula
ENSOARG00000006041	TNRC6C	97	80.389	ENSAPLG00000005456	TNRC6C	96	79.849	Anas_platyrhynchos
ENSOARG00000006041	TNRC6C	98	79.849	ENSACAG00000016198	TNRC6C	94	80.120	Anolis_carolinensis
ENSOARG00000006041	TNRC6C	97	84.506	ENSANAG00000021554	TNRC6C	95	84.461	Aotus_nancymaae
ENSOARG00000006041	TNRC6C	91	45.716	ENSACLG00000000424	tnrc6c1	94	49.819	Astatotilapia_calliptera
ENSOARG00000006041	TNRC6C	98	94.837	ENSBTAG00000018658	TNRC6C	96	94.485	Bos_taurus
ENSOARG00000006041	TNRC6C	98	84.407	ENSCJAG00000019431	TNRC6C	95	84.082	Callithrix_jacchus
ENSOARG00000006041	TNRC6C	98	86.500	ENSCAFG00000005224	TNRC6C	95	86.445	Canis_familiaris
ENSOARG00000006041	TNRC6C	97	86.087	ENSCAFG00020006661	TNRC6C	95	86.033	Canis_lupus_dingo
ENSOARG00000006041	TNRC6C	97	96.501	ENSCHIG00000026004	TNRC6C	96	99.061	Capra_hircus
ENSOARG00000006041	TNRC6C	87	85.758	ENSTSYG00000005403	TNRC6C	96	85.524	Carlito_syrichta
ENSOARG00000006041	TNRC6C	97	77.397	ENSCAPG00000007307	TNRC6C	95	77.481	Cavia_aperea
ENSOARG00000006041	TNRC6C	97	81.963	ENSCPOG00000000467	TNRC6C	96	81.893	Cavia_porcellus
ENSOARG00000006041	TNRC6C	97	84.997	ENSCCAG00000030524	TNRC6C	96	84.867	Cebus_capucinus
ENSOARG00000006041	TNRC6C	97	84.943	ENSCATG00000033135	TNRC6C	96	84.806	Cercocebus_atys
ENSOARG00000006041	TNRC6C	97	83.023	ENSCLAG00000011139	TNRC6C	95	82.916	Chinchilla_lanigera
ENSOARG00000006041	TNRC6C	97	85.205	ENSCSAG00000005167	TNRC6C	95	84.883	Chlorocebus_sabaeus
ENSOARG00000006041	TNRC6C	67	97.778	ENSCHOG00000000088	TNRC6C	70	97.778	Choloepus_hoffmanni
ENSOARG00000006041	TNRC6C	91	79.395	ENSCPBG00000027960	TNRC6C	96	80.544	Chrysemys_picta_bellii
ENSOARG00000006041	TNRC6C	97	84.779	ENSCANG00000041771	TNRC6C	96	84.564	Colobus_angolensis_palliatus
ENSOARG00000006041	TNRC6C	98	81.345	ENSCGRG00001022686	Tnrc6c	96	80.688	Cricetulus_griseus_chok1gshd
ENSOARG00000006041	TNRC6C	98	81.675	ENSCGRG00000018041	Tnrc6c	96	80.688	Cricetulus_griseus_crigri
ENSOARG00000006041	TNRC6C	70	51.096	ENSCSEG00000012744	tnrc6c1	95	45.789	Cynoglossus_semilaevis
ENSOARG00000006041	TNRC6C	97	48.322	ENSDARG00000076847	tnrc6c1	91	52.542	Danio_rerio
ENSOARG00000006041	TNRC6C	98	82.097	ENSDNOG00000003247	TNRC6C	95	81.651	Dasypus_novemcinctus
ENSOARG00000006041	TNRC6C	97	78.781	ENSDORG00000004558	Tnrc6c	96	78.998	Dipodomys_ordii
ENSOARG00000006041	TNRC6C	80	74.726	ENSETEG00000005527	TNRC6C	85	74.617	Echinops_telfairi
ENSOARG00000006041	TNRC6C	87	84.152	ENSEASG00005004799	TNRC6C	96	83.990	Equus_asinus_asinus
ENSOARG00000006041	TNRC6C	97	85.800	ENSECAG00000012486	TNRC6C	95	85.855	Equus_caballus
ENSOARG00000006041	TNRC6C	87	84.095	ENSEEUG00000010008	TNRC6C	92	84.095	Erinaceus_europaeus
ENSOARG00000006041	TNRC6C	98	85.111	ENSFCAG00000028358	TNRC6C	95	84.949	Felis_catus
ENSOARG00000006041	TNRC6C	87	79.668	ENSFALG00000000848	TNRC6C	96	78.897	Ficedula_albicollis
ENSOARG00000006041	TNRC6C	89	83.462	ENSFDAG00000010368	TNRC6C	96	83.186	Fukomys_damarensis
ENSOARG00000006041	TNRC6C	99	46.950	ENSFHEG00000002936	tnrc6c1	95	46.521	Fundulus_heteroclitus
ENSOARG00000006041	TNRC6C	91	81.729	ENSGALG00000001725	TNRC6C	96	81.323	Gallus_gallus
ENSOARG00000006041	TNRC6C	99	47.355	ENSGAFG00000019019	tnrc6c1	95	45.909	Gambusia_affinis
ENSOARG00000006041	TNRC6C	100	43.885	ENSGACG00000012320	tnrc6c1	93	43.914	Gasterosteus_aculeatus
ENSOARG00000006041	TNRC6C	91	81.035	ENSGAGG00000022043	TNRC6C	95	80.428	Gopherus_agassizii
ENSOARG00000006041	TNRC6C	97	84.515	ENSGGOG00000011304	TNRC6C	96	84.150	Gorilla_gorilla
ENSOARG00000006041	TNRC6C	97	44.995	ENSHBUG00000010846	tnrc6c1	94	50.110	Haplochromis_burtoni
ENSOARG00000006041	TNRC6C	98	83.252	ENSHGLG00000004809	TNRC6C	95	83.089	Heterocephalus_glaber_female
ENSOARG00000006041	TNRC6C	97	82.924	ENSHGLG00100012597	TNRC6C	95	82.710	Heterocephalus_glaber_male
ENSOARG00000006041	TNRC6C	98	49.432	ENSIPUG00000000818	tnrc6c1	94	49.262	Ictalurus_punctatus
ENSOARG00000006041	TNRC6C	98	81.936	ENSSTOG00000009101	TNRC6C	96	81.749	Ictidomys_tridecemlineatus
ENSOARG00000006041	TNRC6C	97	81.247	ENSJJAG00000017055	Tnrc6c	95	80.955	Jaculus_jaculus
ENSOARG00000006041	TNRC6C	99	45.119	ENSKMAG00000021023	tnrc6c1	93	47.716	Kryptolebias_marmoratus
ENSOARG00000006041	TNRC6C	90	68.298	ENSLACG00000015283	TNRC6C	96	68.280	Latimeria_chalumnae
ENSOARG00000006041	TNRC6C	98	53.575	ENSLOCG00000013377	tnrc6c1	93	77.941	Lepisosteus_oculatus
ENSOARG00000006041	TNRC6C	98	83.216	ENSLAFG00000011122	TNRC6C	96	83.080	Loxodonta_africana
ENSOARG00000006041	TNRC6C	97	84.964	ENSMFAG00000043943	TNRC6C	96	84.867	Macaca_fascicularis
ENSOARG00000006041	TNRC6C	97	85.441	ENSMMUG00000011924	TNRC6C	96	82.840	Macaca_mulatta
ENSOARG00000006041	TNRC6C	97	84.997	ENSMNEG00000030405	TNRC6C	96	84.590	Macaca_nemestrina
ENSOARG00000006041	TNRC6C	97	85.052	ENSMLEG00000033436	TNRC6C	96	84.867	Mandrillus_leucophaeus
ENSOARG00000006041	TNRC6C	94	53.206	ENSMAMG00000023613	tnrc6c1	93	50.000	Mastacembelus_armatus
ENSOARG00000006041	TNRC6C	97	46.014	ENSMZEG00005010920	tnrc6c1	94	49.819	Maylandia_zebra
ENSOARG00000006041	TNRC6C	97	74.946	ENSMGAG00000003906	TNRC6C	96	74.865	Meleagris_gallopavo
ENSOARG00000006041	TNRC6C	87	81.071	ENSMAUG00000021618	Tnrc6c	96	81.171	Mesocricetus_auratus
ENSOARG00000006041	TNRC6C	97	85.753	ENSMICG00000003952	TNRC6C	96	85.775	Microcebus_murinus
ENSOARG00000006041	TNRC6C	97	82.678	ENSMOCG00000015879	Tnrc6c	96	82.578	Microtus_ochrogaster
ENSOARG00000006041	TNRC6C	79	51.799	ENSMMOG00000005203	tnrc6c1	93	47.760	Mola_mola
ENSOARG00000006041	TNRC6C	98	78.030	ENSMODG00000001785	TNRC6C	95	77.543	Monodelphis_domestica
ENSOARG00000006041	TNRC6C	97	82.404	MGP_CAROLIEiJ_G0017465	Tnrc6c	96	82.401	Mus_caroli
ENSOARG00000006041	TNRC6C	97	82.022	ENSMUSG00000025571	Tnrc6c	96	82.048	Mus_musculus
ENSOARG00000006041	TNRC6C	97	82.459	MGP_PahariEiJ_G0018593	Tnrc6c	96	82.460	Mus_pahari
ENSOARG00000006041	TNRC6C	97	82.057	MGP_SPRETEiJ_G0018309	Tnrc6c	96	82.048	Mus_spretus
ENSOARG00000006041	TNRC6C	98	84.883	ENSMPUG00000013348	TNRC6C	94	84.758	Mustela_putorius_furo
ENSOARG00000006041	TNRC6C	97	79.859	ENSMLUG00000014431	TNRC6C	94	79.763	Myotis_lucifugus
ENSOARG00000006041	TNRC6C	97	82.231	ENSNGAG00000012203	Tnrc6c	95	82.203	Nannospalax_galili
ENSOARG00000006041	TNRC6C	91	46.278	ENSNBRG00000005344	tnrc6c1	94	50.623	Neolamprologus_brichardi
ENSOARG00000006041	TNRC6C	96	82.749	ENSNLEG00000000047	TNRC6C	95	82.120	Nomascus_leucogenys
ENSOARG00000006041	TNRC6C	86	81.460	ENSMEUG00000005104	TNRC6C	91	80.868	Notamacropus_eugenii
ENSOARG00000006041	TNRC6C	87	83.323	ENSODEG00000012499	TNRC6C	96	83.041	Octodon_degus
ENSOARG00000006041	TNRC6C	79	49.928	ENSONIG00000002210	tnrc6c1	89	51.739	Oreochromis_niloticus
ENSOARG00000006041	TNRC6C	97	56.829	ENSOANG00000009758	-	96	56.700	Ornithorhynchus_anatinus
ENSOARG00000006041	TNRC6C	82	80.212	ENSOCUG00000006122	TNRC6C	95	75.876	Oryctolagus_cuniculus
ENSOARG00000006041	TNRC6C	91	45.455	ENSORLG00000009837	tnrc6c1	68	75.138	Oryzias_latipes
ENSOARG00000006041	TNRC6C	92	46.260	ENSORLG00020016510	tnrc6c1	95	45.684	Oryzias_latipes_hni
ENSOARG00000006041	TNRC6C	75	41.622	ENSORLG00015000171	tnrc6c1	97	41.086	Oryzias_latipes_hsok
ENSOARG00000006041	TNRC6C	92	46.681	ENSOMEG00000000357	tnrc6c1	95	46.281	Oryzias_melastigma
ENSOARG00000006041	TNRC6C	87	84.117	ENSOGAG00000007197	TNRC6C	96	83.889	Otolemur_garnettii
ENSOARG00000006041	TNRC6C	97	84.956	ENSPPAG00000027160	TNRC6C	96	84.806	Pan_paniscus
ENSOARG00000006041	TNRC6C	98	85.328	ENSPPRG00000018881	TNRC6C	95	85.165	Panthera_pardus
ENSOARG00000006041	TNRC6C	97	85.052	ENSPTRG00000009699	TNRC6C	96	84.806	Pan_troglodytes
ENSOARG00000006041	TNRC6C	97	85.052	ENSPANG00000019994	TNRC6C	96	84.645	Papio_anubis
ENSOARG00000006041	TNRC6C	90	77.817	ENSPSIG00000018069	TNRC6C	96	77.582	Pelodiscus_sinensis
ENSOARG00000006041	TNRC6C	63	58.145	ENSPMGG00000022911	tnrc6c1	71	65.193	Periophthalmus_magnuspinnatus
ENSOARG00000006041	TNRC6C	97	82.350	ENSPEMG00000009785	Tnrc6c	95	82.050	Peromyscus_maniculatus_bairdii
ENSOARG00000006041	TNRC6C	53	79.137	ENSPCIG00000017421	-	99	79.034	Phascolarctos_cinereus
ENSOARG00000006041	TNRC6C	96	47.934	ENSPFOG00000012560	tnrc6c1	97	53.692	Poecilia_formosa
ENSOARG00000006041	TNRC6C	86	48.294	ENSPLAG00000021055	tnrc6c1	93	48.373	Poecilia_latipinna
ENSOARG00000006041	TNRC6C	97	85.878	ENSPPYG00000008679	TNRC6C	94	85.536	Pongo_abelii
ENSOARG00000006041	TNRC6C	83	84.409	ENSPCAG00000012510	TNRC6C	89	83.979	Procavia_capensis
ENSOARG00000006041	TNRC6C	87	86.072	ENSPCOG00000021451	TNRC6C	96	85.896	Propithecus_coquereli
ENSOARG00000006041	TNRC6C	86	91.111	ENSPVAG00000002008	TNRC6C	91	91.111	Pteropus_vampyrus
ENSOARG00000006041	TNRC6C	92	46.200	ENSPNYG00000014477	tnrc6c1	94	50.666	Pundamilia_nyererei
ENSOARG00000006041	TNRC6C	87	82.529	ENSRNOG00000022395	Tnrc6c	96	82.374	Rattus_norvegicus
ENSOARG00000006041	TNRC6C	97	84.902	ENSRBIG00000027777	TNRC6C	96	84.746	Rhinopithecus_bieti
ENSOARG00000006041	TNRC6C	97	84.997	ENSRROG00000042912	TNRC6C	96	84.806	Rhinopithecus_roxellana
ENSOARG00000006041	TNRC6C	97	84.888	ENSSBOG00000023981	TNRC6C	96	84.625	Saimiri_boliviensis_boliviensis
ENSOARG00000006041	TNRC6C	91	54.685	ENSSFOG00015006475	tnrc6c1	95	48.189	Scleropages_formosus
ENSOARG00000006041	TNRC6C	59	59.167	ENSSFOG00015004735	-	83	65.287	Scleropages_formosus
ENSOARG00000006041	TNRC6C	92	45.289	ENSSMAG00000012761	tnrc6c1	94	47.112	Scophthalmus_maximus
ENSOARG00000006041	TNRC6C	93	46.885	ENSSDUG00000002366	tnrc6c1	95	47.128	Seriola_dumerili
ENSOARG00000006041	TNRC6C	83	47.525	ENSSLDG00000025613	tnrc6c1	93	47.639	Seriola_lalandi_dorsalis
ENSOARG00000006041	TNRC6C	82	91.111	ENSSARG00000006816	TNRC6C	87	91.111	Sorex_araneus
ENSOARG00000006041	TNRC6C	78	79.956	ENSSPUG00000007341	TNRC6C	93	79.371	Sphenodon_punctatus
ENSOARG00000006041	TNRC6C	70	53.603	ENSSPAG00000014977	tnrc6c1	95	46.327	Stegastes_partitus
ENSOARG00000006041	TNRC6C	87	86.758	ENSSSCG00000034373	TNRC6C	96	86.633	Sus_scrofa
ENSOARG00000006041	TNRC6C	91	79.085	ENSTGUG00000007733	TNRC6C	96	79.636	Taeniopygia_guttata
ENSOARG00000006041	TNRC6C	68	54.021	ENSTRUG00000011685	tnrc6c1	93	48.408	Takifugu_rubripes
ENSOARG00000006041	TNRC6C	87	50.222	ENSTNIG00000005273	tnrc6c1	93	59.023	Tetraodon_nigroviridis
ENSOARG00000006041	TNRC6C	58	77.966	ENSTBEG00000005046	TNRC6C	95	77.627	Tupaia_belangeri
ENSOARG00000006041	TNRC6C	90	86.553	ENSTTRG00000010828	TNRC6C	96	86.553	Tursiops_truncatus
ENSOARG00000006041	TNRC6C	98	84.745	ENSUMAG00000013614	TNRC6C	96	85.240	Ursus_maritimus
ENSOARG00000006041	TNRC6C	87	86.245	ENSVVUG00000015268	TNRC6C	96	86.139	Vulpes_vulpes
ENSOARG00000006041	TNRC6C	87	68.307	ENSXETG00000019470	tnrc6c	96	68.307	Xenopus_tropicalis
ENSOARG00000006041	TNRC6C	99	45.857	ENSXMAG00000025971	tnrc6c1	96	47.001	Xiphophorus_maculatus